Gene annotation
Transcriptome id Sobic.006G247000.1
Synonym Sb06g031230
Functional annotation AP2 domain containing protein, expressed
UniProt C5Y9H9
Pfam PF00847
Panther DB PTHR31194 PTHR31194:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G25190 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g56150.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032925 , Zm00025a049794 , Zm00025a009475 , Zm00025a057246
Brachypodium KQK19294 , KQK01160 , KQJ85074
Barley HORVU7Hr1G029870.1 , HORVU7Hr1G029870.3 , HORVU7Hr1G029870.2 , HORVU7Hr1G029870.4 , HORVU2Hr1G111680.8 , HORVU2Hr1G111680.7 , HORVU2Hr1G111680.6 , HORVU2Hr1G111680.5 , HORVU2Hr1G111680.4 , HORVU2Hr1G111680.3 , HORVU2Hr1G111680.2 , HORVU2Hr1G111680.1 , HORVU6Hr1G085850.4 , HORVU6Hr1G085850.5 , HORVU6Hr1G085850.6 , HORVU6Hr1G085850.2 , HORVU6Hr1G085850.3
Wheat TraesCS6A02G360300 , TraesCS2A02G503100 , TraesCS7D02G147200 , TraesCS7D02G147100 , TraesCS6D02G343800 , TraesCS2D02G503900 , TraesCS2B02G531100 , TraesCS2D02G503100 , TraesCS7B02G048100 , TraesCS2B02G530800 , TraesCS6B02G393200
Populus -


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cDNA sequences
Sobic.006G247000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G445300 - -
2 Sobic.007G055300 MYB family transcription factor, putative, expressed -
3 Sobic.007G128400 expressed protein -
4 Sobic.004G058800 - -
5 Sobic.003G321500 Homeobox domain containing protein, expressed -
6 Sobic.003G207100 expressed protein -
7 Sobic.002G302200 expressed protein -
8 Sobic.003G325800 ATP-binding region, ATPase-like domain containing protein, expressed -
9 Sobic.001G394900 expressed protein -
10 Sobic.005G173900 - -
11 Sobic.005G174500 - -
12 Sobic.009G090250 - -
13 Sobic.007G040000 - -
14 Sobic.003G091500 expressed protein -
15 Sobic.008G184100 aspartic proteinase, putative, expressed -
16 Sobic.003G207600 OsFBD5 - F-box and FBD domain containing protein, expressed -
17 Sobic.003G415800 DEF9 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.001G246400 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.001G069100 - -
20 Sobic.001G270600 - -


Gene co-expression network
sample Sobic006G247000 Sobic006G247000 Sobic001G445300 Sobic001G445300 Sobic006G247000--Sobic001G445300 Sobic007G055300 Sobic007G055300 Sobic006G247000--Sobic007G055300 Sobic007G128400 Sobic007G128400 Sobic006G247000--Sobic007G128400 Sobic004G058800 Sobic004G058800 Sobic006G247000--Sobic004G058800 Sobic003G321500 Sobic003G321500 Sobic006G247000--Sobic003G321500 Sobic003G207100 Sobic003G207100 Sobic006G247000--Sobic003G207100 Sobic002G302200 Sobic002G302200 Sobic006G247000--Sobic002G302200 Sobic003G325800 Sobic003G325800 Sobic006G247000--Sobic003G325800 Sobic001G394900 Sobic001G394900 Sobic006G247000--Sobic001G394900 Sobic001G445300--Sobic004G058800 Sobic001G445300--Sobic007G055300 Sobic001G445300--Sobic003G207100 Sobic008G043800 Sobic008G043800 Sobic001G445300--Sobic008G043800 Sobic005G176800 Sobic005G176800 Sobic001G445300--Sobic005G176800 Sobic001G445300--Sobic003G321500 Sobic008G184100 Sobic008G184100 Sobic001G445300--Sobic008G184100 Sobic001G445300--Sobic003G325800 Sobic003G091500 Sobic003G091500 Sobic001G445300--Sobic003G091500 Sobic007G055300--Sobic003G321500 Sobic003G415800 Sobic003G415800 Sobic007G055300--Sobic003G415800 Sobic007G040000 Sobic007G040000 Sobic007G055300--Sobic007G040000 Sobic009G090250 Sobic009G090250 Sobic007G055300--Sobic009G090250 Sobic001G270600 Sobic001G270600 Sobic007G055300--Sobic001G270600 Sobic007G055300--Sobic002G302200 Sobic005G173900 Sobic005G173900 Sobic007G055300--Sobic005G173900 Sobic005G174500 Sobic005G174500 Sobic007G055300--Sobic005G174500 Sobic007G055300--Sobic003G207100 Sobic006G117300 Sobic006G117300 Sobic007G128400--Sobic006G117300 Sobic007G128400--Sobic007G040000 Sobic007G128400--Sobic005G174500 Sobic007G128400--Sobic009G090250 Sobic001G246400 Sobic001G246400 Sobic007G128400--Sobic001G246400 Sobic007G128400--Sobic003G321500 Sobic002G089500 Sobic002G089500 Sobic007G128400--Sobic002G089500 Sobic002G267700 Sobic002G267700 Sobic007G128400--Sobic002G267700 Sobic001G392900 Sobic001G392900 Sobic007G128400--Sobic001G392900 Sobic004G058800--Sobic001G445300 Sobic004G058800--Sobic003G207100 Sobic004G058800--Sobic007G055300 Sobic005G173800 Sobic005G173800 Sobic004G058800--Sobic005G173800 Sobic004G058800--Sobic005G176800 Sobic004G058800--Sobic008G043800 Sobic003G207600 Sobic003G207600 Sobic004G058800--Sobic003G207600 Sobic007G204350 Sobic007G204350 Sobic004G058800--Sobic007G204350 Sobic004G058800--Sobic003G321500 Sobic003G321500--Sobic009G090250 Sobic003G321500--Sobic006G117300 Sobic003G321500--Sobic007G040000 Sobic003G321500--Sobic001G246400 Sobic003G321500--Sobic001G270600 Sobic003G321500--Sobic005G174500 Sobic003G321500--Sobic003G207600 Sobic006G064700 Sobic006G064700 Sobic003G321500--Sobic006G064700 Sobic003G321500--Sobic005G173900 Sobic002G007700 Sobic002G007700 Sobic003G207100--Sobic002G007700 Sobic003G207100--Sobic003G091500 Sobic003G207100--Sobic008G184100 Sobic003G207100--Sobic002G089500 Sobic001G233600 Sobic001G233600 Sobic003G207100--Sobic001G233600 Sobic004G171600 Sobic004G171600 Sobic003G207100--Sobic004G171600 Sobic005G077900 Sobic005G077900 Sobic003G207100--Sobic005G077900 Sobic003G207100--Sobic005G174500 Sobic008G088900 Sobic008G088900 Sobic003G207100--Sobic008G088900 Sobic005G198400 Sobic005G198400 Sobic002G302200--Sobic005G198400 Sobic002G302200--Sobic005G173900 Sobic002G302200--Sobic007G040000 Sobic002G302200--Sobic005G174500 Sobic002G302200--Sobic009G090250 Sobic002G302200--Sobic001G270600 Sobic008G164101 Sobic008G164101 Sobic002G302200--Sobic008G164101 Sobic002G302200--Sobic001G246400 Sobic002G302200--Sobic003G321500 Sobic008G031400 Sobic008G031400 Sobic003G325800--Sobic008G031400 Sobic001G511400 Sobic001G511400 Sobic003G325800--Sobic001G511400 Sobic001G284700 Sobic001G284700 Sobic003G325800--Sobic001G284700 Sobic002G172200 Sobic002G172200 Sobic003G325800--Sobic002G172200 Sobic008G159300 Sobic008G159300 Sobic003G325800--Sobic008G159300 Sobic002G172100 Sobic002G172100 Sobic003G325800--Sobic002G172100 Sobic003G414000 Sobic003G414000 Sobic003G325800--Sobic003G414000 Sobic002G015400 Sobic002G015400 Sobic003G325800--Sobic002G015400 Sobic005G082300 Sobic005G082300 Sobic003G325800--Sobic005G082300 Sobic001G324800 Sobic001G324800 Sobic001G394900--Sobic001G324800 Sobic004G294100 Sobic004G294100 Sobic001G394900--Sobic004G294100 Sobic010G022600 Sobic010G022600 Sobic001G394900--Sobic010G022600 Sobic004G099750 Sobic004G099750 Sobic001G394900--Sobic004G099750 Sobic003G402100 Sobic003G402100 Sobic001G394900--Sobic003G402100 Sobic010G107300 Sobic010G107300 Sobic001G394900--Sobic010G107300 Sobic005G226150 Sobic005G226150 Sobic001G394900--Sobic005G226150 Sobic001G175501 Sobic001G175501 Sobic001G394900--Sobic001G175501 Sobic008G088881 Sobic008G088881 Sobic001G394900--Sobic008G088881
Octagon: transcription factors


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