Gene annotation
Transcriptome id Sobic.006G252466.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFI0
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF3
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT5G10990 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os04g56680.1 : OsSAUR22 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a009430 , Zm00025a057295 , Zm00025a057297
Brachypodium KQJ85127
Barley HORVU2Hr1G110420.2 , HORVU2Hr1G110420.3 , HORVU2Hr1G110420.4 , HORVU2Hr1G110460.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G191700 expansin precursor, putative, expressed -
2 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
3 Sobic.002G280300 expressed protein -
4 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
5 Sobic.006G278100 expressed protein -
6 Sobic.004G170900 expressed protein -
7 Sobic.006G245600 protein kinase domain containing protein, expressed -
8 Sobic.003G250700 fasciclin domain containing protein, expressed -
9 Sobic.007G130900 expressed protein -
10 Sobic.008G039800 rhoGAP domain containing protein, expressed -
11 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.001G528600 remorin family protein, putative, expressed -
13 Sobic.003G115200 expressed protein -
14 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
15 Sobic.010G216600 expressed protein -
16 Sobic.004G297950 - -
17 Sobic.001G389300 OsFBX82 - F-box domain containing protein, expressed -
18 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
19 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -


Gene co-expression network
sample Sobic006G252466 Sobic006G252466 Sobic006G191700 Sobic006G191700 Sobic006G252466--Sobic006G191700 Sobic001G107200 Sobic001G107200 Sobic006G252466--Sobic001G107200 Sobic002G280300 Sobic002G280300 Sobic006G252466--Sobic002G280300 Sobic005G047100 Sobic005G047100 Sobic006G252466--Sobic005G047100 Sobic006G278100 Sobic006G278100 Sobic006G252466--Sobic006G278100 Sobic004G170900 Sobic004G170900 Sobic006G252466--Sobic004G170900 Sobic006G245600 Sobic006G245600 Sobic006G252466--Sobic006G245600 Sobic003G250700 Sobic003G250700 Sobic006G252466--Sobic003G250700 Sobic007G130900 Sobic007G130900 Sobic006G252466--Sobic007G130900 Sobic001G261549 Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic006G191700--Sobic001G107200 Sobic006G191700--Sobic006G278100 Sobic009G189200 Sobic009G189200 Sobic006G191700--Sobic009G189200 Sobic001G528600 Sobic001G528600 Sobic006G191700--Sobic001G528600 Sobic007G094400 Sobic007G094400 Sobic006G191700--Sobic007G094400 Sobic008G096200 Sobic008G096200 Sobic006G191700--Sobic008G096200 Sobic004G331200 Sobic004G331200 Sobic006G191700--Sobic004G331200 Sobic001G078600 Sobic001G078600 Sobic006G191700--Sobic001G078600 Sobic001G107200--Sobic001G528600 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic001G107200--Sobic005G047100 Sobic001G107200--Sobic007G094400 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic001G107200--Sobic006G278100 Sobic002G280300--Sobic004G170900 Sobic004G156900 Sobic004G156900 Sobic002G280300--Sobic004G156900 Sobic002G280300--Sobic005G047100 Sobic009G021700 Sobic009G021700 Sobic002G280300--Sobic009G021700 Sobic004G170800 Sobic004G170800 Sobic002G280300--Sobic004G170800 Sobic002G280300--Sobic001G107200 Sobic009G242501 Sobic009G242501 Sobic002G280300--Sobic009G242501 Sobic002G280300--Sobic001G528600 Sobic008G143000 Sobic008G143000 Sobic002G280300--Sobic008G143000 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic007G150800 Sobic007G150800 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic006G278100--Sobic002G128800 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549 Sobic004G170900--Sobic007G225400 Sobic010G216600 Sobic010G216600 Sobic004G170900--Sobic010G216600 Sobic004G170900--Sobic005G047100 Sobic006G054600 Sobic006G054600 Sobic004G170900--Sobic006G054600 Sobic004G170900--Sobic009G242501 Sobic002G224200 Sobic002G224200 Sobic004G170900--Sobic002G224200 Sobic004G170900--Sobic002G280300 Sobic004G170900--Sobic004G156900 Sobic004G170900--Sobic009G021700 Sobic006G245600--Sobic007G130900 Sobic006G245600--Sobic004G170900 Sobic006G245600--Sobic005G047100 Sobic005G130700 Sobic005G130700 Sobic006G245600--Sobic005G130700 Sobic005G110600 Sobic005G110600 Sobic006G245600--Sobic005G110600 Sobic003G277200 Sobic003G277200 Sobic006G245600--Sobic003G277200 Sobic006G245600--Sobic004G297950 Sobic008G039800 Sobic008G039800 Sobic006G245600--Sobic008G039800 Sobic006G218400 Sobic006G218400 Sobic006G245600--Sobic006G218400 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic001G046800 Sobic001G046800 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500 Sobic003G017500 Sobic003G017500 Sobic007G130900--Sobic003G017500 Sobic007G130900--Sobic005G110600 Sobic007G130900--Sobic006G245600 Sobic007G130900--Sobic004G156900 Sobic007G130900--Sobic003G420100 Sobic007G130900--Sobic006G054600 Sobic002G016400 Sobic002G016400 Sobic007G130900--Sobic002G016400 Sobic007G130900--Sobic003G277200 Sobic007G130900--Sobic008G039800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.