Gene annotation
Transcriptome id Sobic.007G033500.1
Synonym Sb07g002880
Functional annotation -
UniProt A0A1Z5R8D7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1
2 Sobic.003G001300 ZOS1-05 - C2H2 zinc finger protein, expressed -
3 Sobic.008G077900 exostosin family domain containing protein, expressed -
4 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
5 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
7 Sobic.002G222600 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
12 Sobic.004G322000 hypro1, putative, expressed -
13 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
14 Sobic.001G506600 exostosin family domain containing protein, expressed -
15 Sobic.003G419400 xylanase inhibitor, putative, expressed -
16 Sobic.010G152300 glycosyltransferase, putative, expressed -
17 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.008G138700 MLA12, putative, expressed -
19 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
20 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter


Gene co-expression network
sample Sobic007G033500 Sobic007G033500 Sobic005G071700 Sobic005G071700 Sobic007G033500--Sobic005G071700 Sobic003G001300 Sobic003G001300 Sobic007G033500--Sobic003G001300 Sobic008G077900 Sobic008G077900 Sobic007G033500--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic007G033500--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic007G033500--Sobic003G140200 Sobic006G205500 Sobic006G205500 Sobic007G033500--Sobic006G205500 Sobic002G222600 Sobic002G222600 Sobic007G033500--Sobic002G222600 Sobic007G154100 Sobic007G154100 Sobic007G033500--Sobic007G154100 Sobic003G282300 Sobic003G282300 Sobic007G033500--Sobic003G282300 Sobic005G071700--Sobic005G222600 Sobic005G071700--Sobic008G077900 Sobic009G060700 Sobic009G060700 Sobic005G071700--Sobic009G060700 Sobic005G071700--Sobic003G001300 Sobic008G138700 Sobic008G138700 Sobic005G071700--Sobic008G138700 Sobic005G071700--Sobic003G140200 Sobic002G019100 Sobic002G019100 Sobic005G071700--Sobic002G019100 Sobic002G239700 Sobic002G239700 Sobic005G071700--Sobic002G239700 Sobic001G232000 Sobic001G232000 Sobic005G071700--Sobic001G232000 Sobic003G001300--Sobic008G077900 Sobic003G001300--Sobic009G060700 Sobic003G001300--Sobic005G222600 Sobic010G152500 Sobic010G152500 Sobic003G001300--Sobic010G152500 Sobic003G001300--Sobic008G138700 Sobic006G092100 Sobic006G092100 Sobic003G001300--Sobic006G092100 Sobic003G001300--Sobic007G154100 Sobic004G322000 Sobic004G322000 Sobic003G001300--Sobic004G322000 Sobic010G152300 Sobic010G152300 Sobic003G001300--Sobic010G152300 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic008G077900--Sobic003G140200 Sobic008G077900--Sobic004G322000 Sobic008G077900--Sobic002G239700 Sobic008G077900--Sobic009G060700 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic008G077900--Sobic005G071700 Sobic005G222600--Sobic009G060700 Sobic005G222600--Sobic003G001300 Sobic005G222600--Sobic008G077900 Sobic005G222600--Sobic008G138700 Sobic005G222600--Sobic005G071700 Sobic010G213600 Sobic010G213600 Sobic005G222600--Sobic010G213600 Sobic005G222600--Sobic010G152300 Sobic005G222600--Sobic006G092100 Sobic009G058400 Sobic009G058400 Sobic005G222600--Sobic009G058400 Sobic003G140200--Sobic003G282300 Sobic003G140200--Sobic004G322000 Sobic003G140200--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic003G140200--Sobic006G031100 Sobic006G085700 Sobic006G085700 Sobic003G140200--Sobic006G085700 Sobic008G035800 Sobic008G035800 Sobic003G140200--Sobic008G035800 Sobic003G140200--Sobic008G077900 Sobic001G263300 Sobic001G263300 Sobic003G140200--Sobic001G263300 Sobic003G215300 Sobic003G215300 Sobic003G140200--Sobic003G215300 Sobic006G205500--Sobic008G077900 Sobic006G117500 Sobic006G117500 Sobic006G205500--Sobic006G117500 Sobic006G205500--Sobic003G001300 Sobic010G096700 Sobic010G096700 Sobic006G205500--Sobic010G096700 Sobic001G506600 Sobic001G506600 Sobic006G205500--Sobic001G506600 Sobic006G205500--Sobic002G239700 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic006G205500--Sobic004G322000 Sobic002G222600--Sobic003G001300 Sobic009G208700 Sobic009G208700 Sobic002G222600--Sobic009G208700 Sobic002G222600--Sobic007G154100 Sobic002G222600--Sobic003G282300 Sobic002G222600--Sobic008G077900 Sobic002G222600--Sobic010G152300 Sobic001G271300 Sobic001G271300 Sobic002G222600--Sobic001G271300 Sobic002G222600--Sobic006G092100 Sobic001G293100 Sobic001G293100 Sobic002G222600--Sobic001G293100 Sobic004G312500 Sobic004G312500 Sobic007G154100--Sobic004G312500 Sobic006G209000 Sobic006G209000 Sobic007G154100--Sobic006G209000 Sobic006G108300 Sobic006G108300 Sobic007G154100--Sobic006G108300 Sobic004G009200 Sobic004G009200 Sobic007G154100--Sobic004G009200 Sobic007G154100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic007G154100--Sobic005G071900 Sobic003G079100 Sobic003G079100 Sobic007G154100--Sobic003G079100 Sobic009G106100 Sobic009G106100 Sobic007G154100--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic007G154100--Sobic005G182800 Sobic003G282300--Sobic007G090600 Sobic003G282300--Sobic006G085700 Sobic003G282300--Sobic003G140200 Sobic004G106100 Sobic004G106100 Sobic003G282300--Sobic004G106100 Sobic003G282300--Sobic008G035800 Sobic006G205700 Sobic006G205700 Sobic003G282300--Sobic006G205700 Sobic003G282300--Sobic006G031100 Sobic003G095100 Sobic003G095100 Sobic003G282300--Sobic003G095100 Sobic003G282300--Sobic004G322000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.