Gene annotation
Transcriptome id Sobic.007G042100.5,Sobic.007G042100.6,Sobic.007G042100.2,Sobic.007G042100.4
Synonym
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1B6PFH9
Pfam -
Panther DB PTHR23155 PTHR23155:SF498
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63020 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os04g08390.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92820 , PNT60485
Barley -
Wheat TraesCS7D02G454400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G200400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
2 Sobic.007G098950 - -
3 Sobic.004G231350 - -
4 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
5 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
6 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
7 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
8 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
11 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
12 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
13 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
14 Sobic.008G088400 - -
15 Sobic.005G079400 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
16 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
17 Sobic.005G032100 hypothetical protein -
18 Sobic.002G030800 app1, putative, expressed -
19 Sobic.008G103000 MBTB11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.001G208600 receptor kinase like protein, putative, expressed -


Gene co-expression network
sample Sobic007G042100 Sobic007G042100 Sobic009G200400 Sobic009G200400 Sobic007G042100--Sobic009G200400 Sobic007G098950 Sobic007G098950 Sobic007G042100--Sobic007G098950 Sobic004G231350 Sobic004G231350 Sobic007G042100--Sobic004G231350 Sobic002G376100 Sobic002G376100 Sobic007G042100--Sobic002G376100 Sobic001G350200 Sobic001G350200 Sobic007G042100--Sobic001G350200 Sobic010G171300 Sobic010G171300 Sobic009G200400--Sobic010G171300 Sobic010G052300 Sobic010G052300 Sobic009G200400--Sobic010G052300 Sobic004G052401 Sobic004G052401 Sobic009G200400--Sobic004G052401 Sobic001G343400 Sobic001G343400 Sobic009G200400--Sobic001G343400 Sobic003G234101 Sobic003G234101 Sobic009G200400--Sobic003G234101 Sobic003G371400 Sobic003G371400 Sobic009G200400--Sobic003G371400 Sobic003G435100 Sobic003G435100 Sobic009G200400--Sobic003G435100 Sobic001G358700 Sobic001G358700 Sobic009G200400--Sobic001G358700 Sobic007G075700 Sobic007G075700 Sobic009G200400--Sobic007G075700 Sobic007G098950--Sobic001G350200 Sobic005G032100 Sobic005G032100 Sobic004G231350--Sobic005G032100 Sobic003G276750 Sobic003G276750 Sobic004G231350--Sobic003G276750 Sobic001G180600 Sobic001G180600 Sobic004G231350--Sobic001G180600 Sobic004G231350--Sobic007G042100 Sobic002G210800 Sobic002G210800 Sobic004G231350--Sobic002G210800 Sobic006G006300 Sobic006G006300 Sobic004G231350--Sobic006G006300 Sobic004G150700 Sobic004G150700 Sobic004G231350--Sobic004G150700 Sobic010G212350 Sobic010G212350 Sobic004G231350--Sobic010G212350 Sobic007G034000 Sobic007G034000 Sobic004G231350--Sobic007G034000 Sobic007G154100 Sobic007G154100 Sobic002G376100--Sobic007G154100 Sobic004G009200 Sobic004G009200 Sobic002G376100--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic002G376100--Sobic002G391900 Sobic010G152500 Sobic010G152500 Sobic002G376100--Sobic010G152500 Sobic003G382200 Sobic003G382200 Sobic002G376100--Sobic003G382200 Sobic005G066300 Sobic005G066300 Sobic002G376100--Sobic005G066300 Sobic009G106100 Sobic009G106100 Sobic002G376100--Sobic009G106100 Sobic005G071900 Sobic005G071900 Sobic002G376100--Sobic005G071900 Sobic006G108300 Sobic006G108300 Sobic002G376100--Sobic006G108300 Sobic001G350200--Sobic001G350200 Sobic008G088400 Sobic008G088400 Sobic001G350200--Sobic008G088400
Octagon: transcription factors


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