Gene annotation
Transcriptome id Sobic.007G055500.1
Synonym terpene synthase, SbTPS1;terpene synthase, Sb07g004470, SbTPS1
Functional annotation "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm" (PubMedID : 21880075)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein terpene synthase 10 (Os) (PubMedID : 27208977)
terpene synthase, putative, expressed
UniProt C5YHH7 , A0A1B6PFS6
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G14490 : Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os08g07080.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6D02G170200 , TraesCS6A02G183000 , TraesCS6B02G211600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
2 Sobic.010G166850 - -
3 Sobic.007G179100 - -
4 Sobic.010G156300 rp1, putative, expressed -
5 Sobic.001G180950 - -
6 Sobic.001G163500 - -
7 Sobic.008G041500 - -
8 Sobic.002G022500 - -
9 Sobic.004G250000 OsMADS57 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.009G035000 expressed protein -
11 Sobic.007G045750 - -
12 Sobic.K032500 - K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
13 Sobic.009G158150 - -
14 Sobic.002G062400 - -
15 Sobic.003G129700 - -
16 Sobic.001G050650 - -
17 Sobic.009G258800 - -
18 Sobic.003G282400 OsMADS32 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.006G210266 - -
20 Sobic.009G025750 - -


Gene co-expression network
sample Sobic007G055500 Sobic007G055500 Sobic004G181400 Sobic004G181400 Sobic007G055500--Sobic004G181400 Sobic010G166850 Sobic010G166850 Sobic007G055500--Sobic010G166850 Sobic007G179100 Sobic007G179100 Sobic007G055500--Sobic007G179100 Sobic010G156300 Sobic010G156300 Sobic007G055500--Sobic010G156300 Sobic001G180950 Sobic001G180950 Sobic007G055500--Sobic001G180950 Sobic001G163500 Sobic001G163500 Sobic007G055500--Sobic001G163500 Sobic008G041500 Sobic008G041500 Sobic007G055500--Sobic008G041500 Sobic002G022500 Sobic002G022500 Sobic007G055500--Sobic002G022500 Sobic004G250000 Sobic004G250000 Sobic007G055500--Sobic004G250000 Sobic010G002600 Sobic010G002600 Sobic004G181400--Sobic010G002600 Sobic006G192900 Sobic006G192900 Sobic004G181400--Sobic006G192900 Sobic004G181400--Sobic008G041500 Sobic002G319900 Sobic002G319900 Sobic004G181400--Sobic002G319900 Sobic009G035000 Sobic009G035000 Sobic004G181400--Sobic009G035000 Sobic003G267150 Sobic003G267150 Sobic004G181400--Sobic003G267150 Sobic004G149150 Sobic004G149150 Sobic004G181400--Sobic004G149150 Sobic008G108100 Sobic008G108100 Sobic004G181400--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic004G181400--Sobic004G173300 Sobic010G166850--Sobic002G022500 Sobic010G166850--Sobic010G156300 SobicK032500 SobicK032500 Sobic010G166850--SobicK032500 Sobic010G166850--Sobic007G179100 Sobic009G258800 Sobic009G258800 Sobic010G166850--Sobic009G258800 Sobic001G050650 Sobic001G050650 Sobic010G166850--Sobic001G050650 Sobic010G166850--Sobic001G180950 Sobic007G045750 Sobic007G045750 Sobic010G166850--Sobic007G045750 Sobic009G025750 Sobic009G025750 Sobic010G166850--Sobic009G025750 Sobic007G179100--Sobic010G156300 Sobic007G179100--Sobic010G166850 Sobic007G179100--Sobic008G041500 Sobic010G207175 Sobic010G207175 Sobic007G179100--Sobic010G207175 Sobic007G179100--Sobic001G163500 Sobic007G179100--Sobic007G045750 Sobic003G282400 Sobic003G282400 Sobic007G179100--Sobic003G282400 Sobic007G179100--Sobic009G035000 Sobic007G179100--Sobic002G022500 Sobic010G156300--Sobic007G179100 Sobic010G156300--Sobic010G166850 Sobic006G083050 Sobic006G083050 Sobic010G156300--Sobic006G083050 Sobic010G156300--Sobic002G022500 Sobic010G156300--Sobic008G041500 Sobic010G156300--SobicK032500 Sobic010G156300--Sobic001G050650 Sobic010G156300--Sobic007G045750 Sobic010G156300--Sobic009G025750 Sobic001G180950--Sobic002G022500 Sobic001G180950--SobicK032500 Sobic001G180950--Sobic010G166850 Sobic001G527550 Sobic001G527550 Sobic001G180950--Sobic001G527550 Sobic001G180950--Sobic009G025750 Sobic001G180950--Sobic010G156300 Sobic001G180950--Sobic007G179100 Sobic001G180950--Sobic009G258800 Sobic001G180950--Sobic001G050650 Sobic003G129700 Sobic003G129700 Sobic001G163500--Sobic003G129700 Sobic009G158150 Sobic009G158150 Sobic001G163500--Sobic009G158150 Sobic002G062400 Sobic002G062400 Sobic001G163500--Sobic002G062400 Sobic001G163500--Sobic003G282400 Sobic001G163500--Sobic007G045750 Sobic001G163500--Sobic007G179100 Sobic001G163500--Sobic008G041500 Sobic002G312550 Sobic002G312550 Sobic001G163500--Sobic002G312550 Sobic006G193801 Sobic006G193801 Sobic001G163500--Sobic006G193801 Sobic008G041500--Sobic009G035000 Sobic008G041500--Sobic003G282400 Sobic008G041500--Sobic007G179100 Sobic008G041500--Sobic010G002600 Sobic008G041500--Sobic002G062400 Sobic008G041500--Sobic001G163500 Sobic008G041500--Sobic010G156300 Sobic008G041500--Sobic003G129700 Sobic008G041500--Sobic007G045750 Sobic002G022500--SobicK032500 Sobic002G022500--Sobic010G166850 Sobic002G022500--Sobic009G258800 Sobic002G022500--Sobic010G156300 Sobic002G022500--Sobic001G050650 Sobic002G022500--Sobic001G527550 Sobic002G022500--Sobic001G180950 Sobic010G166201 Sobic010G166201 Sobic002G022500--Sobic010G166201 Sobic002G018200 Sobic002G018200 Sobic002G022500--Sobic002G018200 Sobic009G148400 Sobic009G148400 Sobic004G250000--Sobic009G148400 Sobic004G249950 Sobic004G249950 Sobic004G250000--Sobic004G249950 Sobic004G250000--Sobic009G158150 Sobic006G053601 Sobic006G053601 Sobic004G250000--Sobic006G053601 Sobic004G252300 Sobic004G252300 Sobic004G250000--Sobic004G252300 Sobic004G250000--Sobic010G166201 Sobic010G098800 Sobic010G098800 Sobic004G250000--Sobic010G098800 Sobic007G042700 Sobic007G042700 Sobic004G250000--Sobic007G042700 Sobic002G073000 Sobic002G073000 Sobic004G250000--Sobic002G073000
Octagon: transcription factors


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