Gene annotation
Transcriptome id Sobic.007G124000.1
Synonym
Functional annotation programmed cell death protein 2, putative, expressed
UniProt A0A1B6PHS2
Pfam -
Panther DB PTHR12298 PTHR12298:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02220 : zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
RAP-DB (Rice) LOC_Os03g18830.1 : programmed cell death protein 2, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G136900 white-brown complex homolog protein 11, putative, expressed -
2 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
3 Sobic.009G088401 - -
4 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
5 Sobic.006G144800 expressed protein -
6 Sobic.006G123700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
7 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.008G119200 - -
10 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
11 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
12 Sobic.003G173032 - -
13 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
14 Sobic.009G187500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MONOCULM 1, putative, expressed -
15 Sobic.008G023000 expressed protein -
16 Sobic.001G527400 - -
17 Sobic.008G050100 SAP domain containing protein, expressed -
18 Sobic.005G209800 nodulin, putative, expressed -
19 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
20 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic007G124000 Sobic007G124000 Sobic010G136900 Sobic010G136900 Sobic007G124000--Sobic010G136900 Sobic002G283800 Sobic002G283800 Sobic007G124000--Sobic002G283800 Sobic009G088401 Sobic009G088401 Sobic007G124000--Sobic009G088401 Sobic002G101800 Sobic002G101800 Sobic007G124000--Sobic002G101800 Sobic006G144800 Sobic006G144800 Sobic007G124000--Sobic006G144800 Sobic006G123700 Sobic006G123700 Sobic007G124000--Sobic006G123700 Sobic003G191800 Sobic003G191800 Sobic007G124000--Sobic003G191800 Sobic010G152700 Sobic010G152700 Sobic007G124000--Sobic010G152700 Sobic008G119200 Sobic008G119200 Sobic007G124000--Sobic008G119200 Sobic010G136900--Sobic002G101800 Sobic010G136900--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic010G136900--Sobic005G102200 Sobic007G139000 Sobic007G139000 Sobic010G136900--Sobic007G139000 Sobic010G136900--Sobic002G283800 Sobic010G136900--Sobic006G123700 Sobic003G111600 Sobic003G111600 Sobic010G136900--Sobic003G111600 Sobic010G136900--Sobic010G152700 Sobic002G344100 Sobic002G344100 Sobic010G136900--Sobic002G344100 Sobic002G283800--Sobic010G136900 Sobic001G516800 Sobic001G516800 Sobic002G283800--Sobic001G516800 Sobic002G283800--Sobic002G101800 Sobic002G285450 Sobic002G285450 Sobic002G283800--Sobic002G285450 Sobic002G283800--Sobic007G139000 Sobic004G132400 Sobic004G132400 Sobic002G283800--Sobic004G132400 Sobic002G283800--Sobic003G191800 Sobic001G147400 Sobic001G147400 Sobic002G283800--Sobic001G147400 Sobic002G283800--Sobic003G111600 Sobic008G023000 Sobic008G023000 Sobic009G088401--Sobic008G023000 Sobic005G209800 Sobic005G209800 Sobic009G088401--Sobic005G209800 Sobic006G171000 Sobic006G171000 Sobic009G088401--Sobic006G171000 Sobic008G002100 Sobic008G002100 Sobic009G088401--Sobic008G002100 Sobic003G173032 Sobic003G173032 Sobic009G088401--Sobic003G173032 Sobic001G527400 Sobic001G527400 Sobic009G088401--Sobic001G527400 Sobic007G072400 Sobic007G072400 Sobic009G088401--Sobic007G072400 Sobic004G226300 Sobic004G226300 Sobic009G088401--Sobic004G226300 Sobic007G183000 Sobic007G183000 Sobic009G088401--Sobic007G183000 Sobic002G101800--Sobic005G102200 Sobic002G101800--Sobic003G191800 Sobic002G101800--Sobic006G123700 Sobic002G101800--Sobic010G152700 Sobic002G101800--Sobic007G139000 Sobic001G137200 Sobic001G137200 Sobic002G101800--Sobic001G137200 Sobic001G483700 Sobic001G483700 Sobic002G101800--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic002G101800--Sobic002G285525 Sobic002G101800--Sobic003G111600 Sobic006G144800--Sobic005G209800 Sobic006G144800--Sobic008G002100 Sobic006G144800--Sobic003G173032 Sobic006G144800--Sobic001G527400 Sobic006G144800--Sobic008G023000 Sobic003G104900 Sobic003G104900 Sobic006G144800--Sobic003G104900 Sobic006G144800--Sobic006G171000 Sobic009G187500 Sobic009G187500 Sobic006G144800--Sobic009G187500 Sobic005G231800 Sobic005G231800 Sobic006G144800--Sobic005G231800 Sobic006G123700--Sobic002G101800 Sobic004G224300 Sobic004G224300 Sobic006G123700--Sobic004G224300 Sobic006G123700--Sobic001G137200 Sobic002G048250 Sobic002G048250 Sobic006G123700--Sobic002G048250 Sobic006G123700--Sobic003G173032 Sobic006G123700--Sobic005G209800 Sobic006G123700--Sobic008G002100 Sobic006G123700--Sobic001G527400 Sobic006G123700--Sobic007G183000 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic003G191800--Sobic001G137200 Sobic003G191800--Sobic007G139000 Sobic003G191800--Sobic001G483700 Sobic003G191800--Sobic005G209800 Sobic003G191800--Sobic007G072400 Sobic003G191800--Sobic006G171000 Sobic003G191800--Sobic008G002100 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic010G152700--Sobic007G183000 Sobic010G152700--Sobic008G023000 Sobic010G152700--Sobic004G226300 Sobic010G152700--Sobic002G285525 Sobic008G119200--Sobic002G048250 Sobic008G119200--Sobic007G183000 Sobic008G119200--Sobic004G226300 Sobic008G119200--Sobic005G231800 Sobic008G119200--Sobic001G527400 Sobic008G119200--Sobic002G285525 Sobic008G119200--Sobic008G023000 Sobic008G119200--Sobic008G002100 Sobic004G347866 Sobic004G347866 Sobic008G119200--Sobic004G347866
Octagon: transcription factors


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