Gene annotation
Transcriptome id Sobic.007G190901.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAS7
Pfam -
Panther DB PTHR34303 PTHR34303:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g66670.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G040900 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
2 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
4 Sobic.007G143100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
5 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
6 Sobic.005G016900 CRP11 - Cysteine-rich family protein precursor, expressed -
7 Sobic.001G075101 - -
8 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
9 Sobic.006G078350 - -
10 Sobic.007G073750 - -
11 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
12 Sobic.009G076700 expressed protein -
13 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
14 Sobic.002G342100 no apical meristem protein, putative, expressed -
15 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
16 Sobic.001G509400 - -
17 Sobic.002G331450 - -
18 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
19 Sobic.006G026400 - -
20 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -


Gene co-expression network
sample Sobic007G190901 Sobic007G190901 Sobic008G040900 Sobic008G040900 Sobic007G190901--Sobic008G040900 Sobic003G083000 Sobic003G083000 Sobic007G190901--Sobic003G083000 Sobic007G169600 Sobic007G169600 Sobic007G190901--Sobic007G169600 Sobic007G143100 Sobic007G143100 Sobic007G190901--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic007G190901--Sobic007G143200 Sobic005G016900 Sobic005G016900 Sobic007G190901--Sobic005G016900 Sobic001G075101 Sobic001G075101 Sobic007G190901--Sobic001G075101 Sobic002G325600 Sobic002G325600 Sobic007G190901--Sobic002G325600 Sobic006G078350 Sobic006G078350 Sobic007G190901--Sobic006G078350 Sobic006G194600 Sobic006G194600 Sobic008G040900--Sobic006G194600 Sobic008G040900--Sobic001G075101 Sobic006G203000 Sobic006G203000 Sobic008G040900--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic008G040900--Sobic002G037400 Sobic008G040900--Sobic007G169600 Sobic008G040900--Sobic003G083000 Sobic006G026400 Sobic006G026400 Sobic008G040900--Sobic006G026400 Sobic008G040900--Sobic005G016900 Sobic008G040900--Sobic007G143100 Sobic003G083000--Sobic007G169600 Sobic003G083000--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic003G083000--Sobic002G331450 Sobic003G083000--Sobic002G037400 Sobic003G083000--Sobic006G203000 Sobic003G083000--Sobic005G016900 Sobic003G083000--Sobic007G143100 Sobic003G083000--Sobic002G325600 Sobic003G083000--Sobic007G143200 Sobic007G169600--Sobic001G075101 Sobic007G169600--Sobic003G083000 Sobic007G169600--Sobic002G331450 Sobic007G169600--Sobic002G037400 Sobic007G169600--Sobic006G203000 Sobic007G169600--Sobic005G016900 Sobic007G169600--Sobic007G143100 Sobic007G169600--Sobic002G325600 Sobic007G169600--Sobic007G143200 Sobic007G143100--Sobic007G143200 Sobic007G143100--Sobic005G016900 Sobic007G073750 Sobic007G073750 Sobic007G143100--Sobic007G073750 Sobic009G076700 Sobic009G076700 Sobic007G143100--Sobic009G076700 Sobic003G397400 Sobic003G397400 Sobic007G143100--Sobic003G397400 Sobic007G143100--Sobic007G169600 Sobic007G143100--Sobic003G083000 Sobic007G143100--Sobic002G037400 Sobic007G143100--Sobic001G075101 Sobic007G143200--Sobic007G143100 Sobic007G143200--Sobic005G016900 Sobic007G143200--Sobic007G073750 Sobic007G143200--Sobic009G076700 Sobic007G143200--Sobic003G397400 Sobic007G143200--Sobic007G169600 Sobic007G143200--Sobic003G083000 Sobic007G143200--Sobic002G037400 Sobic007G143200--Sobic001G075101 Sobic005G016900--Sobic007G143100 Sobic005G016900--Sobic007G073750 Sobic005G016900--Sobic007G143200 Sobic005G016900--Sobic009G076700 Sobic005G016900--Sobic003G397400 Sobic005G016900--Sobic007G169600 Sobic005G016900--Sobic003G083000 Sobic005G016900--Sobic002G037400 Sobic005G016900--Sobic001G075101 Sobic001G075101--Sobic007G169600 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic001G075101--Sobic002G331450 Sobic007G153001 Sobic007G153001 Sobic001G075101--Sobic007G153001 Sobic001G075101--Sobic002G325600 Sobic001G509400 Sobic001G509400 Sobic001G075101--Sobic001G509400 Sobic002G182800 Sobic002G182800 Sobic001G075101--Sobic002G182800 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic002G325600--Sobic001G075101 Sobic002G325600--Sobic003G083000 Sobic002G325600--Sobic006G203000 Sobic002G325600--Sobic002G037400 Sobic002G325600--Sobic001G509400 Sobic002G325600--Sobic005G016900 Sobic002G325600--Sobic007G143100 Sobic006G078350--Sobic001G075101 Sobic006G078350--Sobic007G169600 Sobic006G078350--Sobic006G203000 Sobic006G078350--Sobic002G037400 Sobic006G078350--Sobic003G083000 Sobic002G023900 Sobic002G023900 Sobic006G078350--Sobic002G023900 Sobic006G078350--Sobic007G153001 Sobic006G078350--Sobic007G143100 Sobic006G078300 Sobic006G078300 Sobic006G078350--Sobic006G078300
Octagon: transcription factors


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