Gene annotation
Transcriptome id Sobic.008G037500.1
Synonym Sb08g003220
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5YRS6
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF720
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22460 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g05600.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029041
Brachypodium KQJ92225
Barley HORVU5Hr1G042290.8 , HORVU5Hr1G042290.9 , HORVU5Hr1G042290.2 , HORVU5Hr1G042290.3 , HORVU5Hr1G042290.6 , HORVU5Hr1G042290.12 , HORVU5Hr1G042290.10
Wheat TraesCS5A02G128500 , TraesCS5A02G128500 , TraesCS5D02G136100 , TraesCS5D02G136100
Populus -


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cDNA sequences
Sobic.008G037500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
2 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
3 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
4 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
6 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
7 Sobic.004G259366 - -
8 Sobic.003G037800 transferase family protein, putative, expressed -
9 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
12 Sobic.003G387000 expressed protein -
13 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
14 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.001G281400 expressed protein -
16 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
17 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
18 Sobic.003G369100 AP2 domain containing protein, expressed -
19 Sobic.010G086200 GRAM domain containing protein, expressed -
20 Sobic.003G288600 reticulon domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G037500 Sobic008G037500 Sobic001G459800 Sobic001G459800 Sobic008G037500--Sobic001G459800 Sobic004G065500 Sobic004G065500 Sobic008G037500--Sobic004G065500 Sobic009G141800 Sobic009G141800 Sobic008G037500--Sobic009G141800 Sobic006G267200 Sobic006G267200 Sobic008G037500--Sobic006G267200 Sobic009G105600 Sobic009G105600 Sobic008G037500--Sobic009G105600 Sobic001G351000 Sobic001G351000 Sobic008G037500--Sobic001G351000 Sobic004G259366 Sobic004G259366 Sobic008G037500--Sobic004G259366 Sobic003G037800 Sobic003G037800 Sobic008G037500--Sobic003G037800 Sobic004G321300 Sobic004G321300 Sobic008G037500--Sobic004G321300 Sobic001G391500 Sobic001G391500 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic004G141200 Sobic004G141200 Sobic001G459800--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G138600 Sobic001G138600 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic004G065500--Sobic006G267200 Sobic004G065500--Sobic001G459800 Sobic004G065500--Sobic003G393900 Sobic004G065500--Sobic007G074000 Sobic010G086200 Sobic010G086200 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic004G065500--Sobic003G228900 Sobic004G065500--Sobic004G321300 Sobic009G247900 Sobic009G247900 Sobic004G065500--Sobic009G247900 Sobic009G141800--Sobic006G267200 Sobic009G141800--Sobic010G086200 Sobic009G141800--Sobic003G393900 Sobic009G141800--Sobic004G065500 Sobic004G187900 Sobic004G187900 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic009G141800--Sobic009G008900 Sobic003G387000 Sobic003G387000 Sobic009G141800--Sobic003G387000 Sobic009G141800--Sobic001G459800 Sobic006G267200--Sobic001G459800 Sobic006G267200--Sobic004G065500 Sobic006G267200--Sobic003G393900 Sobic001G405500 Sobic001G405500 Sobic006G267200--Sobic001G405500 Sobic006G267200--Sobic009G141800 Sobic006G267200--Sobic010G086200 Sobic004G146000 Sobic004G146000 Sobic006G267200--Sobic004G146000 Sobic006G267200--Sobic004G141200 Sobic001G320900 Sobic001G320900 Sobic006G267200--Sobic001G320900 Sobic009G105700 Sobic009G105700 Sobic009G105600--Sobic009G105700 Sobic004G331400 Sobic004G331400 Sobic009G105600--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic009G105600--Sobic002G175100 Sobic004G271400 Sobic004G271400 Sobic009G105600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic009G105600--Sobic002G414700 Sobic007G184600 Sobic007G184600 Sobic009G105600--Sobic007G184600 Sobic003G322400 Sobic003G322400 Sobic009G105600--Sobic003G322400 Sobic006G047400 Sobic006G047400 Sobic009G105600--Sobic006G047400 Sobic001G374700 Sobic001G374700 Sobic009G105600--Sobic001G374700 Sobic001G351000--Sobic004G065500 Sobic004G220000 Sobic004G220000 Sobic001G351000--Sobic004G220000 Sobic004G171400 Sobic004G171400 Sobic001G351000--Sobic004G171400 Sobic001G351000--Sobic001G459800 Sobic001G351000--Sobic006G267200 Sobic001G351000--Sobic009G141800 Sobic001G351000--Sobic003G393900 Sobic005G113300 Sobic005G113300 Sobic001G351000--Sobic005G113300 Sobic001G351000--Sobic003G228900 Sobic002G188900 Sobic002G188900 Sobic004G259366--Sobic002G188900 Sobic001G038900 Sobic001G038900 Sobic004G259366--Sobic001G038900 Sobic004G100700 Sobic004G100700 Sobic004G259366--Sobic004G100700 Sobic003G084400 Sobic003G084400 Sobic004G259366--Sobic003G084400 Sobic004G259366--Sobic003G393900 Sobic004G259366--Sobic005G011300 Sobic010G066700 Sobic010G066700 Sobic004G259366--Sobic010G066700 Sobic009G159400 Sobic009G159400 Sobic004G259366--Sobic009G159400 Sobic009G183400 Sobic009G183400 Sobic004G259366--Sobic009G183400 Sobic003G429000 Sobic003G429000 Sobic003G037800--Sobic003G429000 Sobic002G245100 Sobic002G245100 Sobic003G037800--Sobic002G245100 Sobic001G389000 Sobic001G389000 Sobic003G037800--Sobic001G389000 Sobic009G033700 Sobic009G033700 Sobic003G037800--Sobic009G033700 Sobic003G037800--Sobic009G159400 Sobic005G018700 Sobic005G018700 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic003G037800--Sobic004G321300 Sobic004G340900 Sobic004G340900 Sobic003G037800--Sobic004G340900 Sobic004G237800 Sobic004G237800 Sobic004G321300--Sobic004G237800 Sobic004G321300--Sobic009G159400 Sobic008G136400 Sobic008G136400 Sobic004G321300--Sobic008G136400 Sobic008G139600 Sobic008G139600 Sobic004G321300--Sobic008G139600 Sobic004G321300--Sobic001G038900 Sobic002G055700 Sobic002G055700 Sobic004G321300--Sobic002G055700 Sobic001G140900 Sobic001G140900 Sobic004G321300--Sobic001G140900 Sobic005G091500 Sobic005G091500 Sobic004G321300--Sobic005G091500 Sobic003G345100 Sobic003G345100 Sobic004G321300--Sobic003G345100
Octagon: transcription factors


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