Gene annotation
Transcriptome id Sobic.008G047900.1
Synonym Sb08g004070
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
PE repeat family protein, putative, expressed
UniProt A0A1B6PBJ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76770 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os12g06820.1 : PE repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a025775
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G084300 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.001G213200 ZOS10-05 - C2H2 zinc finger protein, expressed -
3 Sobic.006G121800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.002G152400 - -
5 Sobic.004G073700 - -
6 Sobic.001G354900 - -
7 Sobic.001G075900 bZIP transcription factor domain containing protein, expressed -
8 Sobic.002G416100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
9 Sobic.002G269700 - -
10 Sobic.004G258800 IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
11 Sobic.006G027800 disease resistance RPP13-like protein 1, putative, expressed -
12 Sobic.003G390600 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
13 Sobic.007G174000 carrier, putative, expressed -
14 Sobic.003G073620 - -
15 Sobic.001G536300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
16 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
17 Sobic.006G196700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant group 1, putative, expressed -
18 Sobic.003G087600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
20 Sobic.006G154900 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic008G047900 Sobic008G047900 Sobic001G084300 Sobic001G084300 Sobic008G047900--Sobic001G084300 Sobic001G213200 Sobic001G213200 Sobic008G047900--Sobic001G213200 Sobic006G121800 Sobic006G121800 Sobic008G047900--Sobic006G121800 Sobic002G152400 Sobic002G152400 Sobic008G047900--Sobic002G152400 Sobic004G073700 Sobic004G073700 Sobic008G047900--Sobic004G073700 Sobic001G354900 Sobic001G354900 Sobic008G047900--Sobic001G354900 Sobic001G075900 Sobic001G075900 Sobic008G047900--Sobic001G075900 Sobic002G416100 Sobic002G416100 Sobic008G047900--Sobic002G416100 Sobic002G269700 Sobic002G269700 Sobic008G047900--Sobic002G269700 Sobic001G084300--Sobic004G073700 Sobic001G084300--Sobic002G152400 Sobic003G390600 Sobic003G390600 Sobic001G084300--Sobic003G390600 Sobic001G084300--Sobic002G269700 Sobic001G084300--Sobic001G354900 Sobic003G281400 Sobic003G281400 Sobic001G084300--Sobic003G281400 Sobic001G536300 Sobic001G536300 Sobic001G084300--Sobic001G536300 Sobic006G027800 Sobic006G027800 Sobic001G084300--Sobic006G027800 Sobic001G084300--Sobic008G047900 Sobic003G073620 Sobic003G073620 Sobic001G213200--Sobic003G073620 Sobic001G213200--Sobic001G075900 Sobic001G213200--Sobic001G354900 Sobic002G202200 Sobic002G202200 Sobic001G213200--Sobic002G202200 Sobic001G391000 Sobic001G391000 Sobic001G213200--Sobic001G391000 Sobic009G242032 Sobic009G242032 Sobic001G213200--Sobic009G242032 Sobic005G066800 Sobic005G066800 Sobic001G213200--Sobic005G066800 Sobic004G221150 Sobic004G221150 Sobic001G213200--Sobic004G221150 Sobic003G265300 Sobic003G265300 Sobic001G213200--Sobic003G265300 Sobic006G121800--Sobic004G073700 Sobic006G121800--Sobic001G084300 Sobic004G023733 Sobic004G023733 Sobic006G121800--Sobic004G023733 Sobic002G035766 Sobic002G035766 Sobic006G121800--Sobic002G035766 Sobic001G041450 Sobic001G041450 Sobic006G121800--Sobic001G041450 Sobic009G150100 Sobic009G150100 Sobic006G121800--Sobic009G150100 Sobic007G100275 Sobic007G100275 Sobic006G121800--Sobic007G100275 SobicK042700 SobicK042700 Sobic006G121800--SobicK042700 Sobic001G272300 Sobic001G272300 Sobic006G121800--Sobic001G272300 Sobic002G152400--Sobic002G269700 Sobic005G199500 Sobic005G199500 Sobic002G152400--Sobic005G199500 Sobic006G018500 Sobic006G018500 Sobic002G152400--Sobic006G018500 Sobic007G069750 Sobic007G069750 Sobic002G152400--Sobic007G069750 Sobic002G213050 Sobic002G213050 Sobic002G152400--Sobic002G213050 Sobic010G129900 Sobic010G129900 Sobic002G152400--Sobic010G129900 Sobic001G418300 Sobic001G418300 Sobic002G152400--Sobic001G418300 Sobic004G055400 Sobic004G055400 Sobic002G152400--Sobic004G055400 Sobic006G196700 Sobic006G196700 Sobic002G152400--Sobic006G196700 Sobic004G139201 Sobic004G139201 Sobic004G073700--Sobic004G139201 Sobic004G073700--Sobic001G084300 Sobic004G073700--Sobic003G390600 Sobic007G218550 Sobic007G218550 Sobic004G073700--Sobic007G218550 Sobic007G174000 Sobic007G174000 Sobic004G073700--Sobic007G174000 Sobic004G073700--Sobic002G269700 Sobic009G026900 Sobic009G026900 Sobic004G073700--Sobic009G026900 Sobic007G174701 Sobic007G174701 Sobic004G073700--Sobic007G174701 Sobic004G073700--Sobic002G152400 Sobic001G354900--Sobic001G213200 Sobic001G354900--Sobic001G075900 Sobic001G354900--Sobic003G073620 Sobic001G354900--Sobic001G536300 Sobic002G268200 Sobic002G268200 Sobic001G354900--Sobic002G268200 Sobic001G523500 Sobic001G523500 Sobic001G354900--Sobic001G523500 Sobic001G354900--Sobic001G084300 Sobic001G354900--Sobic002G202200 Sobic001G354900--Sobic004G221150 Sobic001G075900--Sobic003G073620 Sobic001G075900--Sobic001G213200 Sobic010G078800 Sobic010G078800 Sobic001G075900--Sobic010G078800 Sobic001G075900--Sobic001G354900 Sobic001G037550 Sobic001G037550 Sobic001G075900--Sobic001G037550 Sobic001G075900--Sobic001G391000 Sobic002G367850 Sobic002G367850 Sobic001G075900--Sobic002G367850 Sobic001G075900--Sobic003G265300 Sobic001G075900--Sobic001G523500 Sobic006G149650 Sobic006G149650 Sobic002G416100--Sobic006G149650 Sobic003G046900 Sobic003G046900 Sobic002G416100--Sobic003G046900 Sobic010G212900 Sobic010G212900 Sobic002G416100--Sobic010G212900 Sobic002G416100--Sobic002G152400 Sobic005G129748 Sobic005G129748 Sobic002G416100--Sobic005G129748 Sobic004G196000 Sobic004G196000 Sobic002G416100--Sobic004G196000 Sobic002G416100--Sobic006G196700 Sobic003G429101 Sobic003G429101 Sobic002G416100--Sobic003G429101 Sobic006G261000 Sobic006G261000 Sobic002G416100--Sobic006G261000 Sobic002G269700--Sobic002G213050 Sobic002G269700--Sobic007G218550 Sobic002G269700--Sobic007G069750 Sobic002G269700--Sobic006G196700 Sobic002G269700--Sobic005G199500 Sobic002G269700--Sobic002G152400 Sobic002G269700--Sobic006G018500 Sobic001G112300 Sobic001G112300 Sobic002G269700--Sobic001G112300 Sobic002G269700--Sobic010G129900
Octagon: transcription factors


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