Gene annotation
Transcriptome id Sobic.008G157900.1
Synonym ATLOX1, Sb08g020675, LOX1
Functional annotation lipoxygenase, putative, expressed
UniProt A0A1B6PDY2
Pfam PF01477 PF00305
Panther DB PTHR11771 PTHR11771:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


Orthologs (automatic annotation)
TAIR AT1G55020 : lipoxygenase 1
RAP-DB (Rice) LOC_Os05g23880.1 : lipoxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a034670 , Zm00025a025065
Brachypodium KQK01990 , KQK01991 , PNT69657 , KQK01989
Barley HORVU1Hr1G054390.14 , HORVU1Hr1G054390.15 , HORVU1Hr1G054390.16 , HORVU1Hr1G054390.17 , HORVU1Hr1G054390.10 , HORVU1Hr1G054390.11 , HORVU1Hr1G054390.12 , HORVU1Hr1G054390.13 , HORVU1Hr1G054390.18 , HORVU1Hr1G054390.19 , HORVU1Hr1G054390.29 , HORVU1Hr1G054390.28 , HORVU1Hr1G054390.21 , HORVU1Hr1G054390.20 , HORVU1Hr1G054390.23 , HORVU1Hr1G054390.22 , HORVU1Hr1G054390.24 , HORVU1Hr1G054390.27 , HORVU1Hr1G054390.26 , HORVU1Hr1G054390.8 , HORVU1Hr1G054390.9 , HORVU1Hr1G054390.6 , HORVU1Hr1G054390.7 , HORVU1Hr1G054390.4 , HORVU1Hr1G054390.5 , HORVU1Hr1G054390.2 , HORVU1Hr1G054390.3 , HORVU1Hr1G054390.32 , HORVU1Hr1G054390.33 , HORVU1Hr1G054390.30 , HORVU1Hr1G054390.31
Wheat TraesCS7A02G246200 , TraesCS1A02G212900 , TraesCS1B02G226400 , TraesCS1D02G215800 , TraesCS1D02G215800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G030900 cytokinin-N-glucosyltransferase 1, putative, expressed -
2 Sobic.007G142300 expressed protein -
3 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.005G227000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic protease, putative, expressed -
5 Sobic.005G209900 expressed protein -
6 Sobic.003G229700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
7 Sobic.010G124200 expressed protein -
8 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
9 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
12 Sobic.004G340000 expressed protein -
13 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
14 Sobic.002G068400 - -
15 Sobic.003G209300 - -
16 Sobic.003G041801 - -
17 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.010G096200 expressed protein -
19 Sobic.001G389600 expressed protein -
20 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -


Gene co-expression network
sample Sobic008G157900 Sobic008G157900 Sobic001G030900 Sobic001G030900 Sobic008G157900--Sobic001G030900 Sobic007G142300 Sobic007G142300 Sobic008G157900--Sobic007G142300 Sobic005G147800 Sobic005G147800 Sobic008G157900--Sobic005G147800 Sobic005G227000 Sobic005G227000 Sobic008G157900--Sobic005G227000 Sobic005G209900 Sobic005G209900 Sobic008G157900--Sobic005G209900 Sobic003G229700 Sobic003G229700 Sobic008G157900--Sobic003G229700 Sobic010G124200 Sobic010G124200 Sobic008G157900--Sobic010G124200 Sobic002G397400 Sobic002G397400 Sobic008G157900--Sobic002G397400 Sobic010G107200 Sobic010G107200 Sobic008G157900--Sobic010G107200 Sobic002G013700 Sobic002G013700 Sobic001G030900--Sobic002G013700 Sobic006G111600 Sobic006G111600 Sobic001G030900--Sobic006G111600 Sobic009G042200 Sobic009G042200 Sobic001G030900--Sobic009G042200 Sobic007G171800 Sobic007G171800 Sobic001G030900--Sobic007G171800 Sobic001G030900--Sobic008G157900 Sobic009G131600 Sobic009G131600 Sobic001G030900--Sobic009G131600 Sobic002G152800 Sobic002G152800 Sobic001G030900--Sobic002G152800 Sobic001G305700 Sobic001G305700 Sobic001G030900--Sobic001G305700 Sobic001G148200 Sobic001G148200 Sobic001G030900--Sobic001G148200 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic005G196500 Sobic005G196500 Sobic007G142300--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic007G142300--Sobic006G233600 Sobic007G142300--Sobic010G124200 Sobic006G032800 Sobic006G032800 Sobic007G142300--Sobic006G032800 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic005G147800--Sobic010G107200 Sobic005G147800--Sobic010G124200 Sobic005G147800--Sobic005G209900 Sobic010G096200 Sobic010G096200 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700 Sobic005G227000--Sobic005G209900 Sobic005G227000--Sobic007G142300 Sobic005G227000--Sobic005G196500 Sobic005G227000--Sobic010G107200 Sobic005G227000--Sobic005G147800 Sobic006G001400 Sobic006G001400 Sobic005G227000--Sobic006G001400 Sobic005G227050 Sobic005G227050 Sobic005G227000--Sobic005G227050 Sobic005G227000--Sobic006G233600 Sobic005G227000--Sobic002G397400 Sobic005G209900--Sobic010G107200 Sobic005G209900--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic005G209900--Sobic009G154100 Sobic005G209900--Sobic005G227050 Sobic005G209900--Sobic006G233600 Sobic007G012800 Sobic007G012800 Sobic005G209900--Sobic007G012800 Sobic005G209900--Sobic007G142300 Sobic005G209900--Sobic005G147800 Sobic002G179700 Sobic002G179700 Sobic005G209900--Sobic002G179700 Sobic005G036500 Sobic005G036500 Sobic003G229700--Sobic005G036500 Sobic003G287000 Sobic003G287000 Sobic003G229700--Sobic003G287000 Sobic003G229700--Sobic007G142300 Sobic003G095000 Sobic003G095000 Sobic003G229700--Sobic003G095000 Sobic003G229700--Sobic005G227000 Sobic008G189500 Sobic008G189500 Sobic003G229700--Sobic008G189500 Sobic010G116500 Sobic010G116500 Sobic003G229700--Sobic010G116500 Sobic006G074100 Sobic006G074100 Sobic003G229700--Sobic006G074100 Sobic003G229700--Sobic005G147800 Sobic010G124200--Sobic005G212400 Sobic006G172700 Sobic006G172700 Sobic010G124200--Sobic006G172700 Sobic010G124200--Sobic001G127700 Sobic010G124200--Sobic006G001400 Sobic010G124200--Sobic002G397400 Sobic010G124200--Sobic005G147800 Sobic009G059100 Sobic009G059100 Sobic010G124200--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic010G124200--Sobic002G020100 Sobic010G124200--Sobic007G142300 Sobic002G397400--Sobic005G147800 Sobic002G397400--Sobic005G212400 Sobic002G397400--Sobic007G142300 Sobic002G397400--Sobic010G124200 Sobic002G397400--Sobic001G265900 Sobic002G397400--Sobic010G107200 Sobic002G397400--Sobic001G127700 Sobic002G397400--Sobic005G209900 Sobic001G307300 Sobic001G307300 Sobic002G397400--Sobic001G307300 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic010G107200--Sobic005G147800
Octagon: transcription factors


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