Gene annotation
Transcriptome id Sobic.004G340000.1
Synonym
Functional annotation expressed protein
UniProt A0A194YSV9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g56490.1 : expressed protein
MaizeGDB (Corn) Zm00025a032830
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
2 Sobic.005G188500 expressed protein -
3 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
4 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.010G027700 OsSAUR24 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.008G035400 stress responsive A/B Barrel domain containing protein, expressed -
7 Sobic.002G068400 - -
8 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
10 Sobic.005G209900 expressed protein -
11 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
12 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
13 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.003G041801 - -
15 Sobic.009G154100 expressed protein -
16 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
17 Sobic.004G248100 endoglucanase, putative, expressed -
18 Sobic.007G094200 expressed protein -
19 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
20 Sobic.001G179400 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic004G340000 Sobic004G340000 Sobic001G488400 Sobic001G488400 Sobic004G340000--Sobic001G488400 Sobic005G188500 Sobic005G188500 Sobic004G340000--Sobic005G188500 Sobic007G012800 Sobic007G012800 Sobic004G340000--Sobic007G012800 Sobic006G044200 Sobic006G044200 Sobic004G340000--Sobic006G044200 Sobic010G027700 Sobic010G027700 Sobic004G340000--Sobic010G027700 Sobic008G035400 Sobic008G035400 Sobic004G340000--Sobic008G035400 Sobic002G068400 Sobic002G068400 Sobic004G340000--Sobic002G068400 Sobic010G107200 Sobic010G107200 Sobic004G340000--Sobic010G107200 Sobic002G382500 Sobic002G382500 Sobic004G340000--Sobic002G382500 Sobic001G488400--Sobic005G188500 Sobic001G488400--Sobic010G027700 Sobic001G488400--Sobic006G044200 Sobic008G187400 Sobic008G187400 Sobic001G488400--Sobic008G187400 Sobic001G438500 Sobic001G438500 Sobic001G488400--Sobic001G438500 Sobic003G116100 Sobic003G116100 Sobic001G488400--Sobic003G116100 Sobic007G189400 Sobic007G189400 Sobic001G488400--Sobic007G189400 Sobic001G488400--Sobic002G068400 Sobic001G488400--Sobic008G035400 Sobic005G188500--Sobic001G488400 Sobic005G188500--Sobic006G044200 Sobic005G188500--Sobic007G189400 Sobic006G032800 Sobic006G032800 Sobic005G188500--Sobic006G032800 Sobic005G188500--Sobic007G012800 Sobic005G188500--Sobic008G035400 Sobic010G065700 Sobic010G065700 Sobic005G188500--Sobic010G065700 Sobic005G209900 Sobic005G209900 Sobic005G188500--Sobic005G209900 Sobic005G188500--Sobic010G107200 Sobic007G012800--Sobic005G209900 Sobic007G012800--Sobic001G488400 Sobic009G154100 Sobic009G154100 Sobic007G012800--Sobic009G154100 Sobic009G134000 Sobic009G134000 Sobic007G012800--Sobic009G134000 Sobic007G012800--Sobic005G188500 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic007G012800--Sobic006G032800 Sobic003G277200 Sobic003G277200 Sobic007G012800--Sobic003G277200 Sobic006G044200--Sobic008G035400 Sobic006G044200--Sobic001G488400 Sobic006G044200--Sobic005G188500 Sobic004G248100 Sobic004G248100 Sobic006G044200--Sobic004G248100 Sobic006G044200--Sobic006G032800 Sobic006G044200--Sobic003G116100 Sobic006G044200--Sobic007G189400 Sobic006G044200--Sobic002G382500 Sobic006G044200--Sobic002G068400 Sobic010G027700--Sobic002G068400 Sobic004G215000 Sobic004G215000 Sobic010G027700--Sobic004G215000 Sobic010G027700--Sobic001G438500 Sobic007G125400 Sobic007G125400 Sobic010G027700--Sobic007G125400 Sobic003G120600 Sobic003G120600 Sobic010G027700--Sobic003G120600 Sobic001G179400 Sobic001G179400 Sobic010G027700--Sobic001G179400 Sobic007G094200 Sobic007G094200 Sobic010G027700--Sobic007G094200 Sobic002G023700 Sobic002G023700 Sobic010G027700--Sobic002G023700 Sobic009G037300 Sobic009G037300 Sobic010G027700--Sobic009G037300 Sobic008G035400--Sobic002G068400 Sobic008G035400--Sobic006G044200 Sobic008G035400--Sobic010G027700 Sobic008G035400--Sobic002G382500 Sobic008G035400--Sobic001G179400 Sobic008G035400--Sobic004G248100 Sobic008G035400--Sobic004G215000 Sobic008G035400--Sobic001G488400 Sobic010G077700 Sobic010G077700 Sobic008G035400--Sobic010G077700 Sobic002G068400--Sobic010G027700 Sobic002G068400--Sobic008G035400 Sobic002G068400--Sobic001G179400 Sobic002G068400--Sobic004G215000 Sobic004G342000 Sobic004G342000 Sobic002G068400--Sobic004G342000 Sobic002G068400--Sobic010G077700 Sobic002G068400--Sobic002G382500 Sobic002G068400--Sobic007G094200 Sobic004G045500 Sobic004G045500 Sobic002G068400--Sobic004G045500 Sobic010G107200--Sobic005G209900 Sobic005G196500 Sobic005G196500 Sobic010G107200--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic007G142300 Sobic007G142300 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic002G382500--Sobic010G027700 Sobic002G382500--Sobic002G068400 Sobic002G382500--Sobic008G035400 Sobic003G339600 Sobic003G339600 Sobic002G382500--Sobic003G339600 Sobic002G382500--Sobic006G044200 Sobic002G382500--Sobic001G488400 Sobic006G219100 Sobic006G219100 Sobic002G382500--Sobic006G219100 Sobic002G382500--Sobic009G037300 Sobic002G382500--Sobic002G023700
Octagon: transcription factors


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