Gene annotation
Transcriptome id Sobic.008G175300.1
Synonym Sb08g021980
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
OsFBX3 - F-box domain containing protein, expressed
UniProt C5YSD6
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF89
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G10430 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os01g07160.1 : OsFBX3 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ86093
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
2 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
3 Sobic.009G004700 stripe rust resistance protein Yr10, putative, expressed -
4 Sobic.009G026400 - -
5 Sobic.002G212601 - -
6 Sobic.004G195700 heavy metal associated domain containing protein, expressed -
7 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
8 Sobic.009G113600 - -
9 Sobic.002G062300 expressed protein -
10 Sobic.004G036200 SAM dependent carboxyl methyltransferase, putative, expressed -
11 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
12 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
13 Sobic.003G089650 - -
14 Sobic.005G148400 OsFBX404 - F-box domain containing protein, expressed -
15 Sobic.005G212500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.003G176100 expressed protein -
17 Sobic.007G059300 - -
18 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
19 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.003G031750 - -


Gene co-expression network
sample Sobic008G175300 Sobic008G175300 Sobic005G054600 Sobic005G054600 Sobic008G175300--Sobic005G054600 Sobic005G054300 Sobic005G054300 Sobic008G175300--Sobic005G054300 Sobic009G004700 Sobic009G004700 Sobic008G175300--Sobic009G004700 Sobic009G026400 Sobic009G026400 Sobic008G175300--Sobic009G026400 Sobic002G212601 Sobic002G212601 Sobic008G175300--Sobic002G212601 Sobic004G195700 Sobic004G195700 Sobic008G175300--Sobic004G195700 Sobic005G054000 Sobic005G054000 Sobic008G175300--Sobic005G054000 Sobic009G113600 Sobic009G113600 Sobic008G175300--Sobic009G113600 Sobic002G062300 Sobic002G062300 Sobic008G175300--Sobic002G062300 Sobic005G054600--Sobic005G054300 Sobic005G054600--Sobic005G054000 Sobic005G054600--Sobic009G026400 Sobic001G305400 Sobic001G305400 Sobic005G054600--Sobic001G305400 Sobic005G054600--Sobic002G062300 Sobic009G101600 Sobic009G101600 Sobic005G054600--Sobic009G101600 Sobic002G221200 Sobic002G221200 Sobic005G054600--Sobic002G221200 Sobic005G142200 Sobic005G142200 Sobic005G054600--Sobic005G142200 Sobic002G060500 Sobic002G060500 Sobic005G054600--Sobic002G060500 Sobic005G054300--Sobic005G054600 Sobic005G054300--Sobic005G054000 Sobic005G054300--Sobic009G026400 Sobic005G054300--Sobic009G101600 Sobic005G054300--Sobic005G142200 Sobic005G054300--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic005G054300--Sobic005G212600 Sobic005G054300--Sobic001G305400 Sobic005G054300--Sobic002G221200 Sobic009G004700--Sobic009G113600 Sobic003G089650 Sobic003G089650 Sobic009G004700--Sobic003G089650 Sobic009G004700--Sobic002G062300 Sobic005G110523 Sobic005G110523 Sobic009G004700--Sobic005G110523 Sobic007G059300 Sobic007G059300 Sobic009G004700--Sobic007G059300 Sobic009G004700--Sobic009G026400 Sobic006G009400 Sobic006G009400 Sobic009G004700--Sobic006G009400 Sobic005G212500 Sobic005G212500 Sobic009G004700--Sobic005G212500 Sobic003G031750 Sobic003G031750 Sobic009G004700--Sobic003G031750 Sobic009G026400--Sobic002G060500 Sobic009G026400--Sobic009G101600 Sobic009G026400--Sobic007G059300 Sobic009G026400--Sobic002G062300 Sobic004G196500 Sobic004G196500 Sobic009G026400--Sobic004G196500 Sobic009G026400--Sobic009G113600 Sobic009G026400--Sobic005G054600 Sobic009G026400--Sobic005G142200 Sobic009G026400--Sobic005G054300 Sobic001G246300 Sobic001G246300 Sobic002G212601--Sobic001G246300 Sobic006G138933 Sobic006G138933 Sobic002G212601--Sobic006G138933 Sobic002G212601--Sobic005G054300 Sobic002G022900 Sobic002G022900 Sobic002G212601--Sobic002G022900 Sobic002G212601--Sobic005G054600 Sobic002G212601--Sobic005G054000 Sobic002G212601--Sobic004G195700 Sobic007G032600 Sobic007G032600 Sobic002G212601--Sobic007G032600 Sobic005G145950 Sobic005G145950 Sobic002G212601--Sobic005G145950 Sobic004G195700--Sobic005G054300 Sobic004G195700--Sobic005G212600 Sobic004G195700--Sobic005G054600 Sobic008G108900 Sobic008G108900 Sobic004G195700--Sobic008G108900 Sobic004G164650 Sobic004G164650 Sobic004G195700--Sobic004G164650 Sobic004G195700--Sobic002G062300 Sobic005G012000 Sobic005G012000 Sobic004G195700--Sobic005G012000 Sobic001G271000 Sobic001G271000 Sobic004G195700--Sobic001G271000 Sobic007G115000 Sobic007G115000 Sobic004G195700--Sobic007G115000 Sobic005G054000--Sobic005G054300 Sobic005G054000--Sobic005G054600 Sobic005G054000--Sobic002G062300 Sobic005G054000--Sobic009G026400 Sobic005G054000--Sobic009G113600 Sobic005G054000--Sobic005G212600 SobicK024000 SobicK024000 Sobic005G054000--SobicK024000 Sobic005G054000--Sobic007G059300 Sobic008G009500 Sobic008G009500 Sobic005G054000--Sobic008G009500 Sobic009G113600--Sobic002G062300 Sobic009G113600--Sobic007G059300 Sobic009G113600--SobicK024000 Sobic009G196700 Sobic009G196700 Sobic009G113600--Sobic009G196700 Sobic009G113600--Sobic008G009500 Sobic009G113600--Sobic008G108900 Sobic009G113600--Sobic003G031750 Sobic008G031350 Sobic008G031350 Sobic009G113600--Sobic008G031350 Sobic010G146200 Sobic010G146200 Sobic009G113600--Sobic010G146200 Sobic002G062300--Sobic009G113600 Sobic002G062300--Sobic007G059300 Sobic002G062300--SobicK024000 Sobic002G062300--Sobic005G212600 Sobic002G062300--Sobic003G031750 Sobic002G062300--Sobic008G009500 Sobic002G062300--Sobic008G108900 Sobic002G062300--Sobic009G196700 Sobic001G253100 Sobic001G253100 Sobic002G062300--Sobic001G253100
Octagon: transcription factors


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