Gene annotation
Transcriptome id Sobic.009G178000.1,Sobic.009G178000.2
Synonym MYR1, Sb09g023830, ATMYR1
Functional annotation Myb transcription factor, putative, expressed
UniProt A0A1B6P922
Pfam PF00249 PF14379
Panther DB PTHR31499 PTHR31499:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18240 : myb-related protein 1
RAP-DB (Rice) LOC_Os05g40960.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a037819 , Zm00025a044053
Brachypodium KQK05685 , KQK05686
Barley HORVU1Hr1G068930.1 , HORVU1Hr1G068930.3 , HORVU1Hr1G068930.2 , HORVU1Hr1G068930.5 , HORVU1Hr1G068930.4 , HORVU1Hr1G068930.7 , HORVU1Hr1G068930.6 , HORVU1Hr1G068930.9 , HORVU1Hr1G068930.40 , HORVU1Hr1G068930.33 , HORVU1Hr1G068930.32 , HORVU1Hr1G068930.31 , HORVU1Hr1G068930.30 , HORVU1Hr1G068930.37 , HORVU1Hr1G068930.36 , HORVU1Hr1G068930.35 , HORVU1Hr1G068930.34 , HORVU1Hr1G068930.39 , HORVU1Hr1G068930.38 , HORVU1Hr1G068930.41 , HORVU1Hr1G068930.20 , HORVU1Hr1G068930.21 , HORVU1Hr1G068930.22 , HORVU1Hr1G068930.23 , HORVU1Hr1G068930.24 , HORVU1Hr1G068930.25 , HORVU1Hr1G068930.26 , HORVU1Hr1G068930.27 , HORVU1Hr1G068930.28 , HORVU1Hr1G068930.29 , HORVU1Hr1G068930.16 , HORVU1Hr1G068930.8 , HORVU1Hr1G068930.15 , HORVU1Hr1G068930.14 , HORVU1Hr1G068930.17 , HORVU1Hr1G068930.11 , HORVU1Hr1G068930.10 , HORVU1Hr1G068930.13 , HORVU1Hr1G068930.12 , HORVU1Hr1G068930.19 , HORVU1Hr1G068930.18
Wheat TraesCS1B02G316200 , TraesCS1B02G316200 , TraesCS1A02G305500 , TraesCS1A02G305500 , TraesCS1D02G305200 , TraesCS1D02G305200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G178000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G026900 ubiquitin conjugating enzyme protein, putative, expressed -
2 Sobic.004G169800 ATP synthase gamma chain, putative, expressed -
3 Sobic.001G258700 - -
4 Sobic.002G185000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
5 Sobic.004G061300 expressed protein -
6 Sobic.001G025201 - -
7 Sobic.003G286650 - -
8 Sobic.003G353050 - -
9 Sobic.010G133800 - -
10 Sobic.009G184450 - -
11 Sobic.001G504300 - -
12 Sobic.003G076300 - -
13 Sobic.002G235000 expressed protein -
14 Sobic.002G323800 expressed protein -
15 Sobic.004G295200 expressed protein -
16 Sobic.001G418300 - -
17 Sobic.004G345300 expressed protein -
18 Sobic.007G059800 expressed protein -
19 Sobic.006G064900 - -
20 Sobic.009G026900 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic009G178000 Sobic009G178000 Sobic004G026900 Sobic004G026900 Sobic009G178000--Sobic004G026900 Sobic004G169800 Sobic004G169800 Sobic009G178000--Sobic004G169800 Sobic001G258700 Sobic001G258700 Sobic009G178000--Sobic001G258700 Sobic002G185000 Sobic002G185000 Sobic009G178000--Sobic002G185000 Sobic004G061300 Sobic004G061300 Sobic009G178000--Sobic004G061300 Sobic001G025201 Sobic001G025201 Sobic009G178000--Sobic001G025201 Sobic003G286650 Sobic003G286650 Sobic009G178000--Sobic003G286650 Sobic003G353050 Sobic003G353050 Sobic009G178000--Sobic003G353050 Sobic010G133800 Sobic010G133800 Sobic009G178000--Sobic010G133800 Sobic004G026900--Sobic004G061300 Sobic004G026900--Sobic003G286650 Sobic004G026900--Sobic001G025201 Sobic004G026900--Sobic003G353050 Sobic007G059800 Sobic007G059800 Sobic004G026900--Sobic007G059800 Sobic004G026900--Sobic009G178000 Sobic002G069601 Sobic002G069601 Sobic004G026900--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic004G026900--Sobic003G318400 Sobic005G181700 Sobic005G181700 Sobic004G026900--Sobic005G181700 Sobic004G169800--Sobic009G178000 Sobic008G167900 Sobic008G167900 Sobic004G169800--Sobic008G167900 Sobic004G169800--Sobic004G026900 Sobic009G184450 Sobic009G184450 Sobic004G169800--Sobic009G184450 Sobic004G169800--Sobic004G061300 Sobic004G169800--Sobic010G133800 Sobic001G325500 Sobic001G325500 Sobic004G169800--Sobic001G325500 Sobic006G064900 Sobic006G064900 Sobic004G169800--Sobic006G064900 Sobic003G288700 Sobic003G288700 Sobic004G169800--Sobic003G288700 Sobic001G258700--Sobic009G184450 Sobic001G258700--Sobic009G178000 Sobic010G028366 Sobic010G028366 Sobic001G258700--Sobic010G028366 Sobic001G504300 Sobic001G504300 Sobic001G258700--Sobic001G504300 Sobic003G177350 Sobic003G177350 Sobic001G258700--Sobic003G177350 Sobic002G235000 Sobic002G235000 Sobic001G258700--Sobic002G235000 Sobic006G065000 Sobic006G065000 Sobic001G258700--Sobic006G065000 Sobic006G128233 Sobic006G128233 Sobic001G258700--Sobic006G128233 Sobic010G123650 Sobic010G123650 Sobic001G258700--Sobic010G123650 Sobic006G107332 Sobic006G107332 Sobic002G185000--Sobic006G107332 Sobic001G418300 Sobic001G418300 Sobic002G185000--Sobic001G418300 Sobic001G055300 Sobic001G055300 Sobic002G185000--Sobic001G055300 Sobic002G185000--Sobic001G025201 Sobic002G185000--Sobic007G059800 Sobic002G185000--Sobic010G133800 Sobic003G372950 Sobic003G372950 Sobic002G185000--Sobic003G372950 Sobic002G185000--Sobic004G026900 Sobic004G201200 Sobic004G201200 Sobic002G185000--Sobic004G201200 Sobic004G061300--Sobic004G026900 Sobic004G061300--Sobic007G059800 Sobic004G061300--Sobic005G181700 Sobic004G061300--Sobic003G286650 Sobic004G061300--Sobic004G201200 Sobic004G061300--Sobic001G025201 Sobic005G057600 Sobic005G057600 Sobic004G061300--Sobic005G057600 Sobic004G061300--Sobic003G318400 Sobic001G062200 Sobic001G062200 Sobic004G061300--Sobic001G062200 Sobic001G025201--Sobic002G069601 Sobic001G025201--Sobic003G353050 Sobic001G025201--Sobic007G059800 Sobic001G025201--Sobic003G318400 Sobic001G025201--Sobic003G286650 Sobic001G025201--Sobic005G181700 Sobic001G025201--Sobic004G201200 Sobic004G295200 Sobic004G295200 Sobic001G025201--Sobic004G295200 Sobic001G025201--Sobic004G026900 Sobic003G286650--Sobic003G353050 Sobic003G286650--Sobic001G025201 Sobic003G286650--Sobic002G069601 Sobic002G333200 Sobic002G333200 Sobic003G286650--Sobic002G333200 Sobic003G286650--Sobic004G026900 Sobic003G286650--Sobic003G318400 Sobic003G286650--Sobic007G059800 Sobic003G286650--Sobic005G181700 Sobic010G262650 Sobic010G262650 Sobic003G286650--Sobic010G262650 Sobic003G353050--Sobic001G025201 Sobic003G353050--Sobic002G069601 Sobic003G353050--Sobic003G286650 Sobic003G353050--Sobic002G333200 Sobic006G259501 Sobic006G259501 Sobic003G353050--Sobic006G259501 Sobic008G192200 Sobic008G192200 Sobic003G353050--Sobic008G192200 Sobic001G272300 Sobic001G272300 Sobic003G353050--Sobic001G272300 Sobic008G154200 Sobic008G154200 Sobic010G133800--Sobic008G154200 Sobic003G064000 Sobic003G064000 Sobic010G133800--Sobic003G064000 Sobic010G133800--Sobic003G372950 Sobic004G286450 Sobic004G286450 Sobic010G133800--Sobic004G286450 Sobic006G223700 Sobic006G223700 Sobic010G133800--Sobic006G223700 Sobic003G126700 Sobic003G126700 Sobic010G133800--Sobic003G126700 Sobic006G167850 Sobic006G167850 Sobic010G133800--Sobic006G167850 Sobic002G269800 Sobic002G269800 Sobic010G133800--Sobic002G269800 Sobic010G133800--Sobic005G057600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.