Gene annotation
Transcriptome id Sobic.010G150325.1
Synonym -
Functional annotation -
UniProt A0A1W0VT69
Pfam PF00646
Panther DB PTHR34591 PTHR34591:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G53370 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os03g46140.1 : OsFBX101 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016067 , Zm00025a046987 , Zm00025a046982
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
2 Sobic.002G302000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.002G214200 ferric reductase, putative, expressed K13447: respiratory burst oxidase
4 Sobic.005G154400 stripe rust resistance protein Yr10, putative, expressed -
5 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
6 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
7 Sobic.005G071800 - -
8 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
9 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.006G144700 BRCA1 C Terminus domain containing protein, expressed K10683: BRCA1-associated RING domain protein 1
12 Sobic.004G232900 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
13 Sobic.009G026101 - -
14 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
15 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.010G003100 monocopper oxidase, putative, expressed -
17 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
18 Sobic.009G227600 aspartyl protease family protein, putative, expressed -
19 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
20 Sobic.010G062400 expressed protein -


Gene co-expression network
sample Sobic010G150325 Sobic010G150325 Sobic006G172200 Sobic006G172200 Sobic010G150325--Sobic006G172200 Sobic002G302000 Sobic002G302000 Sobic010G150325--Sobic002G302000 Sobic002G214200 Sobic002G214200 Sobic010G150325--Sobic002G214200 Sobic005G154400 Sobic005G154400 Sobic010G150325--Sobic005G154400 Sobic009G073400 Sobic009G073400 Sobic010G150325--Sobic009G073400 Sobic009G151700 Sobic009G151700 Sobic010G150325--Sobic009G151700 Sobic005G071800 Sobic005G071800 Sobic010G150325--Sobic005G071800 Sobic004G271500 Sobic004G271500 Sobic010G150325--Sobic004G271500 Sobic009G206500 Sobic009G206500 Sobic010G150325--Sobic009G206500 Sobic006G172200--Sobic009G073400 Sobic010G054100 Sobic010G054100 Sobic006G172200--Sobic010G054100 Sobic006G144700 Sobic006G144700 Sobic006G172200--Sobic006G144700 Sobic003G345200 Sobic003G345200 Sobic006G172200--Sobic003G345200 Sobic010G067800 Sobic010G067800 Sobic006G172200--Sobic010G067800 Sobic004G119700 Sobic004G119700 Sobic006G172200--Sobic004G119700 Sobic006G172200--Sobic002G214200 Sobic002G351700 Sobic002G351700 Sobic006G172200--Sobic002G351700 Sobic001G507000 Sobic001G507000 Sobic006G172200--Sobic001G507000 Sobic002G302000--Sobic006G144700 Sobic002G302000--Sobic009G151700 Sobic007G139500 Sobic007G139500 Sobic002G302000--Sobic007G139500 Sobic001G196000 Sobic001G196000 Sobic002G302000--Sobic001G196000 Sobic007G040301 Sobic007G040301 Sobic002G302000--Sobic007G040301 Sobic008G174966 Sobic008G174966 Sobic002G302000--Sobic008G174966 Sobic004G010000 Sobic004G010000 Sobic002G302000--Sobic004G010000 Sobic010G090500 Sobic010G090500 Sobic002G302000--Sobic010G090500 Sobic001G437500 Sobic001G437500 Sobic002G302000--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic002G214200--Sobic001G144200 Sobic010G118300 Sobic010G118300 Sobic002G214200--Sobic010G118300 Sobic008G014700 Sobic008G014700 Sobic002G214200--Sobic008G014700 Sobic002G214200--Sobic009G206500 Sobic004G339800 Sobic004G339800 Sobic002G214200--Sobic004G339800 Sobic002G275500 Sobic002G275500 Sobic002G214200--Sobic002G275500 Sobic002G214200--Sobic006G172200 Sobic007G009500 Sobic007G009500 Sobic002G214200--Sobic007G009500 Sobic009G026101 Sobic009G026101 Sobic002G214200--Sobic009G026101 Sobic005G154300 Sobic005G154300 Sobic005G154400--Sobic005G154300 Sobic010G003100 Sobic010G003100 Sobic005G154400--Sobic010G003100 Sobic002G255500 Sobic002G255500 Sobic005G154400--Sobic002G255500 Sobic005G154400--Sobic004G271500 Sobic002G191000 Sobic002G191000 Sobic005G154400--Sobic002G191000 Sobic005G154400--Sobic010G150325 Sobic001G029800 Sobic001G029800 Sobic005G154400--Sobic001G029800 Sobic001G070300 Sobic001G070300 Sobic005G154400--Sobic001G070300 Sobic010G248500 Sobic010G248500 Sobic005G154400--Sobic010G248500 Sobic009G061000 Sobic009G061000 Sobic009G073400--Sobic009G061000 Sobic009G073400--Sobic003G345200 Sobic003G017500 Sobic003G017500 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic001G159800 Sobic001G159800 Sobic009G073400--Sobic001G159800 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G073400--Sobic009G206500 Sobic009G073400--Sobic010G090500 Sobic006G267500 Sobic006G267500 Sobic009G151700--Sobic006G267500 Sobic009G151700--Sobic009G206500 Sobic009G151700--Sobic003G345200 Sobic009G151700--Sobic007G139500 Sobic009G246700 Sobic009G246700 Sobic009G151700--Sobic009G246700 Sobic009G151700--Sobic007G040301 Sobic009G151700--Sobic009G061000 Sobic002G161700 Sobic002G161700 Sobic009G151700--Sobic002G161700 Sobic009G119700 Sobic009G119700 Sobic009G151700--Sobic009G119700 Sobic005G012800 Sobic005G012800 Sobic005G071800--Sobic005G012800 Sobic005G093500 Sobic005G093500 Sobic005G071800--Sobic005G093500 Sobic009G063400 Sobic009G063400 Sobic005G071800--Sobic009G063400 Sobic005G071800--Sobic001G196000 Sobic006G256200 Sobic006G256200 Sobic005G071800--Sobic006G256200 Sobic010G096100 Sobic010G096100 Sobic005G071800--Sobic010G096100 Sobic002G064600 Sobic002G064600 Sobic005G071800--Sobic002G064600 Sobic003G258800 Sobic003G258800 Sobic005G071800--Sobic003G258800 Sobic002G083600 Sobic002G083600 Sobic005G071800--Sobic002G083600 Sobic001G403200 Sobic001G403200 Sobic004G271500--Sobic001G403200 Sobic004G271500--Sobic002G191000 Sobic010G176800 Sobic010G176800 Sobic004G271500--Sobic010G176800 Sobic004G271500--Sobic001G029800 Sobic009G079900 Sobic009G079900 Sobic004G271500--Sobic009G079900 Sobic002G158900 Sobic002G158900 Sobic004G271500--Sobic002G158900 Sobic001G314000 Sobic001G314000 Sobic004G271500--Sobic001G314000 Sobic002G020500 Sobic002G020500 Sobic004G271500--Sobic002G020500 Sobic004G271500--Sobic001G144200 Sobic009G206500--Sobic007G139500 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic009G206500--Sobic007G040301 Sobic009G206500--Sobic002G275500 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.