Gene annotation
Transcriptome id Sobic.004G232900.1,Sobic.004G232900.2
Synonym Sb04g027650
Functional annotation uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
UniProt A0A194YSH4 , C5XYP0
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF25 PTHR10788:SF25 PTHR10788
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0003824; catalytic activity GO:0005992trehalose biosynthetic process GO:0005992trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G35910 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os02g51680.1 : uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
MaizeGDB (Corn) Zm00025a022126 , Zm00025a015246 , Zm00025a006067 , Zm00025a033170 , Zm00025a048808
Brachypodium KQJ90023 , KQJ98224 , KQK21468 , KQK01866
Barley HORVU6Hr1G074960.8 , HORVU6Hr1G074960.9 , HORVU6Hr1G074960.4 , HORVU6Hr1G074960.5 , HORVU6Hr1G074960.6 , HORVU6Hr1G074960.7 , HORVU6Hr1G074960.2 , HORVU6Hr1G074960.3 , HORVU6Hr1G074960.20 , HORVU5Hr1G058300.5 , HORVU5Hr1G058300.4 , HORVU5Hr1G058300.6 , HORVU5Hr1G058300.1 , HORVU5Hr1G058300.3 , HORVU5Hr1G058300.2 , HORVU6Hr1G074960.18 , HORVU6Hr1G074960.19 , HORVU6Hr1G074960.16 , HORVU6Hr1G074960.17 , HORVU6Hr1G074960.14 , HORVU6Hr1G074960.12 , HORVU6Hr1G074960.13 , HORVU6Hr1G074960.10 , HORVU6Hr1G074960.11
Wheat TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS6A02G301800 , TraesCS6D02G281100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
3 Sobic.002G207000 - -
4 Sobic.010G176800 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
7 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
8 Sobic.001G183600 galactosyltransferase, putative, expressed -
9 Sobic.002G214200 ferric reductase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.009G106500 PMR5, putative, expressed -
11 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
12 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
14 Sobic.005G120900 expressed protein -
15 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.005G226400 RGH1A, putative, expressed -
17 Sobic.003G046700 expressed protein -
18 Sobic.009G018300 vrga1, putative, expressed -
19 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
20 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic004G232900 Sobic004G232900 Sobic007G009500 Sobic007G009500 Sobic004G232900--Sobic007G009500 Sobic004G271500 Sobic004G271500 Sobic004G232900--Sobic004G271500 Sobic002G207000 Sobic002G207000 Sobic004G232900--Sobic002G207000 Sobic010G176800 Sobic010G176800 Sobic004G232900--Sobic010G176800 Sobic004G008600 Sobic004G008600 Sobic004G232900--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic004G232900--Sobic010G269000 Sobic005G134200 Sobic005G134200 Sobic004G232900--Sobic005G134200 Sobic001G183600 Sobic001G183600 Sobic004G232900--Sobic001G183600 Sobic002G214200 Sobic002G214200 Sobic004G232900--Sobic002G214200 Sobic003G045900 Sobic003G045900 Sobic007G009500--Sobic003G045900 Sobic005G110490 Sobic005G110490 Sobic007G009500--Sobic005G110490 Sobic001G072600 Sobic001G072600 Sobic007G009500--Sobic001G072600 Sobic001G360700 Sobic001G360700 Sobic007G009500--Sobic001G360700 Sobic006G156600 Sobic006G156600 Sobic007G009500--Sobic006G156600 Sobic007G009500--Sobic004G232900 Sobic002G372800 Sobic002G372800 Sobic007G009500--Sobic002G372800 Sobic004G339800 Sobic004G339800 Sobic007G009500--Sobic004G339800 Sobic001G133900 Sobic001G133900 Sobic007G009500--Sobic001G133900 Sobic001G403200 Sobic001G403200 Sobic004G271500--Sobic001G403200 Sobic002G191000 Sobic002G191000 Sobic004G271500--Sobic002G191000 Sobic004G271500--Sobic010G176800 Sobic001G029800 Sobic001G029800 Sobic004G271500--Sobic001G029800 Sobic009G079900 Sobic009G079900 Sobic004G271500--Sobic009G079900 Sobic002G158900 Sobic002G158900 Sobic004G271500--Sobic002G158900 Sobic001G314000 Sobic001G314000 Sobic004G271500--Sobic001G314000 Sobic002G020500 Sobic002G020500 Sobic004G271500--Sobic002G020500 Sobic001G144200 Sobic001G144200 Sobic004G271500--Sobic001G144200 Sobic003G079100 Sobic003G079100 Sobic002G207000--Sobic003G079100 Sobic003G255600 Sobic003G255600 Sobic002G207000--Sobic003G255600 Sobic001G471800 Sobic001G471800 Sobic002G207000--Sobic001G471800 Sobic006G224500 Sobic006G224500 Sobic002G207000--Sobic006G224500 Sobic002G082000 Sobic002G082000 Sobic002G207000--Sobic002G082000 Sobic007G015100 Sobic007G015100 Sobic002G207000--Sobic007G015100 Sobic001G514700 Sobic001G514700 Sobic002G207000--Sobic001G514700 Sobic006G108300 Sobic006G108300 Sobic002G207000--Sobic006G108300 Sobic005G182800 Sobic005G182800 Sobic002G207000--Sobic005G182800 Sobic010G176800--Sobic009G079900 Sobic010G176800--Sobic004G008600 Sobic001G272600 Sobic001G272600 Sobic010G176800--Sobic001G272600 Sobic001G506100 Sobic001G506100 Sobic010G176800--Sobic001G506100 Sobic010G176800--Sobic005G134200 Sobic010G176800--Sobic010G269000 Sobic007G220400 Sobic007G220400 Sobic010G176800--Sobic007G220400 Sobic009G060700 Sobic009G060700 Sobic010G176800--Sobic009G060700 Sobic010G176800--Sobic004G271500 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic005G216500 Sobic005G216500 Sobic004G008600--Sobic005G216500 Sobic003G046700 Sobic003G046700 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic005G120900 Sobic005G120900 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic010G269000--Sobic005G226400 Sobic010G241900 Sobic010G241900 Sobic010G269000--Sobic010G241900 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic002G391300 Sobic002G391300 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic010G128300 Sobic010G128300 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G134200--Sobic006G047200 Sobic009G206500 Sobic009G206500 Sobic001G183600--Sobic009G206500 Sobic009G026101 Sobic009G026101 Sobic001G183600--Sobic009G026101 Sobic002G275500 Sobic002G275500 Sobic001G183600--Sobic002G275500 Sobic009G063400 Sobic009G063400 Sobic001G183600--Sobic009G063400 Sobic001G183600--Sobic001G029800 Sobic007G119500 Sobic007G119500 Sobic001G183600--Sobic007G119500 Sobic010G090500 Sobic010G090500 Sobic001G183600--Sobic010G090500 Sobic003G366300 Sobic003G366300 Sobic001G183600--Sobic003G366300 Sobic002G393200 Sobic002G393200 Sobic001G183600--Sobic002G393200 Sobic002G214200--Sobic001G144200 Sobic010G118300 Sobic010G118300 Sobic002G214200--Sobic010G118300 Sobic008G014700 Sobic008G014700 Sobic002G214200--Sobic008G014700 Sobic002G214200--Sobic009G206500 Sobic002G214200--Sobic004G339800 Sobic002G214200--Sobic002G275500 Sobic006G172200 Sobic006G172200 Sobic002G214200--Sobic006G172200 Sobic002G214200--Sobic007G009500 Sobic002G214200--Sobic009G026101
Octagon: transcription factors


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