Gene annotation
Transcriptome id Sobic.010G219600.1
Synonym Sb10g026530
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A194YKP4
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF105
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G65530 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g45350.2 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051732
Brachypodium KQK16989 , KQK16988
Barley HORVU7Hr1G109290.8 , HORVU7Hr1G109290.9 , HORVU7Hr1G109290.1 , HORVU7Hr1G109290.2 , HORVU7Hr1G109290.3 , HORVU7Hr1G109290.4 , HORVU7Hr1G109290.5 , HORVU7Hr1G109290.6 , HORVU7Hr1G109290.7 , HORVU7Hr1G109290.10
Wheat TraesCS7B02G388000 , TraesCS7B02G388000 , TraesCS7B02G388000 , TraesCS7D02G471700 , TraesCS7A02G484300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
3 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
4 Sobic.006G093800 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.010G251700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT2@4 - Na+ transporter, expressed -
6 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
7 Sobic.003G021100 expressed protein -
8 Sobic.004G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
9 Sobic.004G027600 expressed protein -
10 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
11 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
12 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
14 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
15 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
16 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
17 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
19 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
20 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)


Gene co-expression network
sample Sobic010G219600 Sobic010G219600 Sobic004G356400 Sobic004G356400 Sobic010G219600--Sobic004G356400 Sobic005G101200 Sobic005G101200 Sobic010G219600--Sobic005G101200 Sobic008G130000 Sobic008G130000 Sobic010G219600--Sobic008G130000 Sobic006G093800 Sobic006G093800 Sobic010G219600--Sobic006G093800 Sobic010G251700 Sobic010G251700 Sobic010G219600--Sobic010G251700 Sobic010G085100 Sobic010G085100 Sobic010G219600--Sobic010G085100 Sobic003G021100 Sobic003G021100 Sobic010G219600--Sobic003G021100 Sobic004G347800 Sobic004G347800 Sobic010G219600--Sobic004G347800 Sobic004G027600 Sobic004G027600 Sobic010G219600--Sobic004G027600 Sobic001G017300 Sobic001G017300 Sobic004G356400--Sobic001G017300 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic010G176200 Sobic010G176200 Sobic008G130000--Sobic010G176200 Sobic008G130000--Sobic004G356400 Sobic003G160200 Sobic003G160200 Sobic008G130000--Sobic003G160200 Sobic008G130000--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic008G130000--Sobic010G275700 Sobic008G130000--Sobic001G303200 Sobic001G168250 Sobic001G168250 Sobic008G130000--Sobic001G168250 Sobic003G229300 Sobic003G229300 Sobic008G130000--Sobic003G229300 Sobic001G333800 Sobic001G333800 Sobic008G130000--Sobic001G333800 Sobic006G093800--Sobic001G017300 Sobic010G249700 Sobic010G249700 Sobic006G093800--Sobic010G249700 Sobic006G093800--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic006G093800--Sobic001G134100 Sobic006G093800--Sobic005G101200 Sobic006G093800--Sobic010G085100 Sobic006G093800--Sobic004G189800 Sobic006G093800--Sobic004G027600 Sobic007G136200 Sobic007G136200 Sobic006G093800--Sobic007G136200 Sobic010G251700--Sobic004G027600 Sobic005G231500 Sobic005G231500 Sobic010G251700--Sobic005G231500 Sobic004G112100 Sobic004G112100 Sobic010G251700--Sobic004G112100 Sobic010G251700--Sobic004G356400 Sobic001G446100 Sobic001G446100 Sobic010G251700--Sobic001G446100 Sobic010G251700--Sobic004G189800 Sobic010G251700--Sobic003G021100 Sobic001G329400 Sobic001G329400 Sobic010G251700--Sobic001G329400 Sobic007G142200 Sobic007G142200 Sobic010G251700--Sobic007G142200 Sobic010G085100--Sobic005G101200 Sobic010G085100--Sobic003G185900 Sobic010G085100--Sobic007G105500 Sobic010G085100--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200 Sobic003G021100--Sobic010G275700 Sobic003G021100--Sobic005G101200 Sobic003G021100--Sobic004G281800 Sobic003G021100--Sobic004G189800 Sobic003G021100--Sobic009G038900 Sobic003G021100--Sobic010G251700 Sobic003G021100--Sobic010G085100 Sobic003G021100--Sobic004G027600 Sobic003G021100--Sobic008G130000 Sobic004G347800--Sobic010G176200 Sobic004G347800--Sobic003G229300 Sobic001G305600 Sobic001G305600 Sobic004G347800--Sobic001G305600 Sobic004G347800--Sobic008G130000 Sobic004G347800--Sobic004G356400 Sobic005G045000 Sobic005G045000 Sobic004G347800--Sobic005G045000 Sobic003G313300 Sobic003G313300 Sobic004G347800--Sobic003G313300 Sobic004G347800--Sobic003G021100 Sobic004G347800--Sobic006G093800 Sobic004G027600--Sobic004G189800 Sobic004G027600--Sobic003G185900 Sobic004G027600--Sobic010G251700 Sobic004G027600--Sobic004G112100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic004G027600--Sobic010G085100 Sobic004G027600--Sobic001G258200 Sobic004G027600--Sobic005G101200
Octagon: transcription factors


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