Gene annotation
Transcriptome id Sobic.001G006300.1
Synonym ATRL4, Sb01g000670, RL4
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5WRY8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05790 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g63890.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a009104
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G162000 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
2 Sobic.003G230200 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
3 Sobic.003G009900 cytochrome P450, putative, expressed -
4 Sobic.001G387700 LTPL66 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.006G135525 - -
6 Sobic.002G020000 wax synthase, putative, expressed -
7 Sobic.005G056201 - -
8 Sobic.001G394250 - -
9 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.005G110436 - -
11 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.002G020100 chalcone synthase, putative, expressed -
13 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
14 Sobic.009G115050 - -
15 Sobic.005G121600 - -
16 Sobic.006G114300 pentatricopeptide, putative, expressed -
17 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
18 Sobic.001G519400 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.001G480700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
20 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III


Gene co-expression network
sample Sobic001G006300 Sobic001G006300 Sobic005G162000 Sobic005G162000 Sobic001G006300--Sobic005G162000 Sobic003G230200 Sobic003G230200 Sobic001G006300--Sobic003G230200 Sobic003G009900 Sobic003G009900 Sobic001G006300--Sobic003G009900 Sobic001G387700 Sobic001G387700 Sobic001G006300--Sobic001G387700 Sobic006G135525 Sobic006G135525 Sobic001G006300--Sobic006G135525 Sobic002G020000 Sobic002G020000 Sobic001G006300--Sobic002G020000 Sobic005G056201 Sobic005G056201 Sobic001G006300--Sobic005G056201 Sobic001G394250 Sobic001G394250 Sobic001G006300--Sobic001G394250 Sobic001G003600 Sobic001G003600 Sobic001G006300--Sobic001G003600 Sobic004G253800 Sobic004G253800 Sobic005G162000--Sobic004G253800 Sobic001G357200 Sobic001G357200 Sobic005G162000--Sobic001G357200 Sobic005G200600 Sobic005G200600 Sobic005G162000--Sobic005G200600 Sobic003G068300 Sobic003G068300 Sobic005G162000--Sobic003G068300 Sobic006G238100 Sobic006G238100 Sobic005G162000--Sobic006G238100 Sobic008G163200 Sobic008G163200 Sobic005G162000--Sobic008G163200 Sobic002G415300 Sobic002G415300 Sobic005G162000--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic005G162000--Sobic002G415400 Sobic006G114300 Sobic006G114300 Sobic005G162000--Sobic006G114300 Sobic008G161900 Sobic008G161900 Sobic003G230200--Sobic008G161900 Sobic009G169300 Sobic009G169300 Sobic003G230200--Sobic009G169300 Sobic009G126200 Sobic009G126200 Sobic003G230200--Sobic009G126200 Sobic002G172300 Sobic002G172300 Sobic003G230200--Sobic002G172300 Sobic003G089500 Sobic003G089500 Sobic003G230200--Sobic003G089500 Sobic004G264800 Sobic004G264800 Sobic003G230200--Sobic004G264800 Sobic002G055000 Sobic002G055000 Sobic003G230200--Sobic002G055000 Sobic010G011500 Sobic010G011500 Sobic003G230200--Sobic010G011500 Sobic008G030801 Sobic008G030801 Sobic003G230200--Sobic008G030801 Sobic008G084200 Sobic008G084200 Sobic003G009900--Sobic008G084200 Sobic003G009900--Sobic002G020000 Sobic009G115050 Sobic009G115050 Sobic003G009900--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic003G009900--Sobic002G329500 Sobic005G212400 Sobic005G212400 Sobic003G009900--Sobic005G212400 Sobic003G009900--Sobic002G415400 Sobic001G127700 Sobic001G127700 Sobic003G009900--Sobic001G127700 Sobic003G009900--Sobic002G415300 Sobic003G009900--Sobic008G163200 Sobic001G387700--Sobic005G162000 Sobic001G387700--Sobic003G009900 Sobic005G121600 Sobic005G121600 Sobic001G387700--Sobic005G121600 Sobic001G387700--Sobic008G163200 Sobic005G029400 Sobic005G029400 Sobic001G387700--Sobic005G029400 Sobic001G387700--Sobic001G006300 Sobic003G058600 Sobic003G058600 Sobic001G387700--Sobic003G058600 Sobic007G009600 Sobic007G009600 Sobic001G387700--Sobic007G009600 Sobic001G387700--Sobic003G230200 Sobic006G135525--Sobic003G230200 Sobic006G135525--Sobic001G006300 Sobic006G135525--Sobic001G387700 Sobic007G116700 Sobic007G116700 Sobic006G135525--Sobic007G116700 Sobic009G062701 Sobic009G062701 Sobic006G135525--Sobic009G062701 Sobic006G135525--Sobic004G264800 Sobic005G188900 Sobic005G188900 Sobic006G135525--Sobic005G188900 Sobic006G135525--Sobic009G169300 Sobic002G015950 Sobic002G015950 Sobic006G135525--Sobic002G015950 Sobic005G110436 Sobic005G110436 Sobic002G020000--Sobic005G110436 Sobic002G020000--Sobic009G115050 Sobic002G020000--Sobic001G003600 Sobic003G096100 Sobic003G096100 Sobic002G020000--Sobic003G096100 Sobic004G076000 Sobic004G076000 Sobic002G020000--Sobic004G076000 Sobic002G020000--Sobic002G329500 Sobic002G020100 Sobic002G020100 Sobic002G020000--Sobic002G020100 Sobic002G020000--Sobic001G394250 Sobic006G172700 Sobic006G172700 Sobic002G020000--Sobic006G172700 Sobic005G056201--Sobic006G172700 Sobic005G056201--Sobic002G020100 Sobic005G056201--Sobic001G003600 Sobic009G059100 Sobic009G059100 Sobic005G056201--Sobic009G059100 Sobic005G056201--Sobic004G076000 Sobic003G157500 Sobic003G157500 Sobic005G056201--Sobic003G157500 Sobic005G056201--Sobic003G096100 Sobic005G020200 Sobic005G020200 Sobic005G056201--Sobic005G020200 Sobic006G025700 Sobic006G025700 Sobic005G056201--Sobic006G025700 Sobic004G105800 Sobic004G105800 Sobic001G394250--Sobic004G105800 Sobic001G519400 Sobic001G519400 Sobic001G394250--Sobic001G519400 Sobic001G394250--Sobic005G110436 Sobic001G394250--Sobic003G096100 Sobic001G394250--Sobic001G003600 Sobic001G394250--Sobic002G020000 Sobic001G394250--Sobic001G127700 Sobic001G394250--Sobic006G172700 Sobic003G074600 Sobic003G074600 Sobic001G394250--Sobic003G074600 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G435600 Sobic001G435600 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic001G003600--Sobic003G058600 Sobic001G003600--Sobic005G110436
Octagon: transcription factors


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