Gene annotation
Transcriptome id Sobic.001G049700.1
Synonym Sb01g004560
Functional annotation UDP-rhamnose rhamnosyltransferase, putative, expressed
UniProt C5WW76
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF145
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G49690 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os03g59030.1 : UDP-rhamnose rhamnosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a044129 , Zm00025a037885 , Zm00025a037884
Brachypodium KQK12611 , KQK12610 , KQK13538
Barley HORVU7Hr1G019260.2 , HORVU7Hr1G019260.1 , HORVU5Hr1G109280.1
Wheat TraesCS5B02G251500 , TraesCS4A02G385500 , TraesCSU02G063000 , TraesCS1A02G323100 , TraesCS5D02G260500 , TraesCS5A02G320000 , TraesCS5D02G464600 , TraesCS5A02G453800 , TraesCS5D02G464400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G006000 expressed protein -
2 Sobic.010G035700 expressed protein -
3 Sobic.010G102300 expressed protein -
4 Sobic.003G176350 - -
5 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.007G015800 - -
7 Sobic.004G180301 - -
8 Sobic.006G275300 VQ domain containing protein, putative, expressed -
9 Sobic.007G066932 - -
10 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.005G156600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
12 Sobic.010G102200 expressed protein -
13 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
14 Sobic.005G169100 cytochrome P450, putative, expressed -
15 Sobic.007G067350 - -
16 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.008G123801 - -
18 Sobic.007G067300 Cupin domain containing protein, expressed -
19 Sobic.007G066908 - -
20 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G049700 Sobic001G049700 Sobic010G006000 Sobic010G006000 Sobic001G049700--Sobic010G006000 Sobic010G035700 Sobic010G035700 Sobic001G049700--Sobic010G035700 Sobic010G102300 Sobic010G102300 Sobic001G049700--Sobic010G102300 Sobic003G176350 Sobic003G176350 Sobic001G049700--Sobic003G176350 Sobic001G319700 Sobic001G319700 Sobic001G049700--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic001G049700--Sobic007G015800 Sobic004G180301 Sobic004G180301 Sobic001G049700--Sobic004G180301 Sobic006G275300 Sobic006G275300 Sobic001G049700--Sobic006G275300 Sobic007G066932 Sobic007G066932 Sobic001G049700--Sobic007G066932 Sobic010G006000--Sobic003G176350 Sobic010G006000--Sobic001G049700 Sobic010G006000--Sobic010G035700 Sobic010G006000--Sobic006G275300 Sobic003G426100 Sobic003G426100 Sobic010G006000--Sobic003G426100 Sobic010G006000--Sobic004G180301 Sobic005G033900 Sobic005G033900 Sobic010G006000--Sobic005G033900 Sobic010G006000--Sobic007G066932 Sobic002G310500 Sobic002G310500 Sobic010G006000--Sobic002G310500 Sobic010G035700--Sobic003G426100 Sobic010G035700--Sobic010G102300 Sobic010G035700--Sobic001G319700 Sobic010G035700--Sobic007G066932 Sobic007G067350 Sobic007G067350 Sobic010G035700--Sobic007G067350 Sobic002G195400 Sobic002G195400 Sobic010G035700--Sobic002G195400 Sobic007G135201 Sobic007G135201 Sobic010G035700--Sobic007G135201 Sobic004G304300 Sobic004G304300 Sobic010G035700--Sobic004G304300 Sobic010G035700--Sobic004G180301 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic007G067600 Sobic007G067600 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic003G176350--Sobic005G033900 Sobic003G176350--Sobic010G006000 Sobic003G437200 Sobic003G437200 Sobic003G176350--Sobic003G437200 Sobic003G176350--Sobic007G066932 Sobic003G176350--Sobic003G426100 Sobic003G176350--Sobic007G067350 Sobic003G430600 Sobic003G430600 Sobic003G176350--Sobic003G430600 Sobic003G062600 Sobic003G062600 Sobic003G176350--Sobic003G062600 Sobic006G084600 Sobic006G084600 Sobic003G176350--Sobic006G084600 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic003G426000 Sobic003G426000 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic002G024650 Sobic002G024650 Sobic007G015800--Sobic002G024650 Sobic001G121850 Sobic001G121850 Sobic007G015800--Sobic001G121850 Sobic004G180301--Sobic010G035700 Sobic004G180301--Sobic003G426100 Sobic004G180301--Sobic004G304300 Sobic004G180301--Sobic007G015800 Sobic004G180301--Sobic010G102300 Sobic004G180301--Sobic001G319700 Sobic004G180301--Sobic007G066932 Sobic010G102200 Sobic010G102200 Sobic004G180301--Sobic010G102200 Sobic004G180301--Sobic002G195400 Sobic010G102100 Sobic010G102100 Sobic006G275300--Sobic010G102100 Sobic006G275300--Sobic003G176350 Sobic006G275300--Sobic010G035700 Sobic003G307300 Sobic003G307300 Sobic006G275300--Sobic003G307300 Sobic006G275300--Sobic010G006000 Sobic006G275300--Sobic001G049700 Sobic006G275300--Sobic003G426100 Sobic006G275300--Sobic001G319700 Sobic006G275300--Sobic010G102300 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic007G066932--Sobic006G084600 Sobic007G066932--Sobic007G135201
Octagon: transcription factors


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