Gene annotation
Transcriptome id Sobic.006G275300.1
Synonym MKS1, Sb06g033670
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1Z5RFV3
Pfam PF05678
Panther DB PTHR33143 PTHR33143:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18690 : MAP kinase substrate 1
RAP-DB (Rice) LOC_Os08g01260.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G102100 expressed protein -
2 Sobic.003G176350 - -
3 Sobic.010G035700 expressed protein -
4 Sobic.003G307300 - -
5 Sobic.010G006000 expressed protein -
6 Sobic.001G049700 UDP-rhamnose rhamnosyltransferase, putative, expressed -
7 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.010G102300 expressed protein -
10 Sobic.002G057900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed K03671: thioredoxin 1
11 Sobic.007G066932 - -
12 Sobic.002G203700 hypothetical protein -
13 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
14 Sobic.001G208800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
15 Sobic.004G180301 - -
16 Sobic.007G067350 - -
17 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G495148 - -
20 Sobic.005G169000 3-ketoacyl-CoA synthase, putative, expressed -


Gene co-expression network
sample Sobic006G275300 Sobic006G275300 Sobic010G102100 Sobic010G102100 Sobic006G275300--Sobic010G102100 Sobic003G176350 Sobic003G176350 Sobic006G275300--Sobic003G176350 Sobic010G035700 Sobic010G035700 Sobic006G275300--Sobic010G035700 Sobic003G307300 Sobic003G307300 Sobic006G275300--Sobic003G307300 Sobic010G006000 Sobic010G006000 Sobic006G275300--Sobic010G006000 Sobic001G049700 Sobic001G049700 Sobic006G275300--Sobic001G049700 Sobic003G426100 Sobic003G426100 Sobic006G275300--Sobic003G426100 Sobic001G319700 Sobic001G319700 Sobic006G275300--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic006G275300--Sobic010G102300 Sobic002G195400 Sobic002G195400 Sobic010G102100--Sobic002G195400 Sobic010G102100--Sobic001G319700 Sobic001G317000 Sobic001G317000 Sobic010G102100--Sobic001G317000 Sobic009G153100 Sobic009G153100 Sobic010G102100--Sobic009G153100 Sobic010G102100--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic010G102100--Sobic007G066932 Sobic010G102100--Sobic010G102300 Sobic005G033900 Sobic005G033900 Sobic010G102100--Sobic005G033900 Sobic001G420600 Sobic001G420600 Sobic010G102100--Sobic001G420600 Sobic003G176350--Sobic005G033900 Sobic003G176350--Sobic010G006000 Sobic003G437200 Sobic003G437200 Sobic003G176350--Sobic003G437200 Sobic003G176350--Sobic007G066932 Sobic003G176350--Sobic003G426100 Sobic007G067350 Sobic007G067350 Sobic003G176350--Sobic007G067350 Sobic003G430600 Sobic003G430600 Sobic003G176350--Sobic003G430600 Sobic003G062600 Sobic003G062600 Sobic003G176350--Sobic003G062600 Sobic006G084600 Sobic006G084600 Sobic003G176350--Sobic006G084600 Sobic010G035700--Sobic003G426100 Sobic010G035700--Sobic010G102300 Sobic010G035700--Sobic001G319700 Sobic010G035700--Sobic007G066932 Sobic010G035700--Sobic007G067350 Sobic010G035700--Sobic002G195400 Sobic007G135201 Sobic007G135201 Sobic010G035700--Sobic007G135201 Sobic004G304300 Sobic004G304300 Sobic010G035700--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G035700--Sobic004G180301 Sobic010G084600 Sobic010G084600 Sobic003G307300--Sobic010G084600 Sobic001G357100 Sobic001G357100 Sobic003G307300--Sobic001G357100 Sobic002G361100 Sobic002G361100 Sobic003G307300--Sobic002G361100 Sobic007G155200 Sobic007G155200 Sobic003G307300--Sobic007G155200 Sobic004G127200 Sobic004G127200 Sobic003G307300--Sobic004G127200 Sobic010G196600 Sobic010G196600 Sobic003G307300--Sobic010G196600 Sobic003G033900 Sobic003G033900 Sobic003G307300--Sobic003G033900 Sobic004G304625 Sobic004G304625 Sobic003G307300--Sobic004G304625 Sobic004G115500 Sobic004G115500 Sobic003G307300--Sobic004G115500 Sobic010G006000--Sobic003G176350 Sobic010G006000--Sobic001G049700 Sobic010G006000--Sobic010G035700 Sobic010G006000--Sobic006G275300 Sobic010G006000--Sobic003G426100 Sobic010G006000--Sobic004G180301 Sobic010G006000--Sobic005G033900 Sobic010G006000--Sobic007G066932 Sobic002G310500 Sobic002G310500 Sobic010G006000--Sobic002G310500 Sobic001G049700--Sobic010G006000 Sobic001G049700--Sobic010G035700 Sobic001G049700--Sobic010G102300 Sobic001G049700--Sobic003G176350 Sobic001G049700--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic001G049700--Sobic007G015800 Sobic001G049700--Sobic004G180301 Sobic001G049700--Sobic006G275300 Sobic001G049700--Sobic007G066932 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic003G426100--Sobic007G067600 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic003G426000 Sobic003G426000 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600
Octagon: transcription factors


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