Gene annotation
Transcriptome id Sobic.003G307300.1
Synonym
Functional annotation -
UniProt A0A1B6Q6B6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
2 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
3 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
5 Sobic.004G127200 glycosyl hydrolases family 16, putative, expressed -
6 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
8 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
9 Sobic.004G115500 expressed protein -
10 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
12 Sobic.007G057000 expressed protein -
13 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
14 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
15 Sobic.001G365100 lipase, putative, expressed -
16 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
17 Sobic.001G495148 - -
18 Sobic.010G042500 expressed protein -
19 Sobic.008G187001 - K09422: transcription factor MYB, plant
20 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase


Gene co-expression network
sample Sobic003G307300 Sobic003G307300 Sobic010G084600 Sobic010G084600 Sobic003G307300--Sobic010G084600 Sobic001G357100 Sobic001G357100 Sobic003G307300--Sobic001G357100 Sobic002G361100 Sobic002G361100 Sobic003G307300--Sobic002G361100 Sobic007G155200 Sobic007G155200 Sobic003G307300--Sobic007G155200 Sobic004G127200 Sobic004G127200 Sobic003G307300--Sobic004G127200 Sobic010G196600 Sobic010G196600 Sobic003G307300--Sobic010G196600 Sobic003G033900 Sobic003G033900 Sobic003G307300--Sobic003G033900 Sobic004G304625 Sobic004G304625 Sobic003G307300--Sobic004G304625 Sobic004G115500 Sobic004G115500 Sobic003G307300--Sobic004G115500 Sobic002G184200 Sobic002G184200 Sobic010G084600--Sobic002G184200 Sobic010G084600--Sobic003G307300 Sobic006G084600 Sobic006G084600 Sobic010G084600--Sobic006G084600 Sobic004G221500 Sobic004G221500 Sobic010G084600--Sobic004G221500 Sobic004G037000 Sobic004G037000 Sobic010G084600--Sobic004G037000 Sobic010G084600--Sobic007G155200 Sobic010G084600--Sobic002G361100 Sobic009G224100 Sobic009G224100 Sobic010G084600--Sobic009G224100 Sobic001G365100 Sobic001G365100 Sobic010G084600--Sobic001G365100 Sobic001G357100--Sobic004G115500 Sobic001G357100--Sobic003G307300 Sobic007G169500 Sobic007G169500 Sobic001G357100--Sobic007G169500 Sobic001G343601 Sobic001G343601 Sobic001G357100--Sobic001G343601 Sobic009G009400 Sobic009G009400 Sobic001G357100--Sobic009G009400 Sobic001G279701 Sobic001G279701 Sobic001G357100--Sobic001G279701 Sobic001G357100--Sobic007G155200 Sobic008G054150 Sobic008G054150 Sobic001G357100--Sobic008G054150 Sobic001G357100--Sobic010G084600 Sobic009G061200 Sobic009G061200 Sobic002G361100--Sobic009G061200 Sobic001G319600 Sobic001G319600 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic002G361100--Sobic009G224100 Sobic002G361100--Sobic004G037000 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic004G216600 Sobic004G216600 Sobic002G361100--Sobic004G216600 Sobic007G155200--Sobic009G224100 Sobic007G155200--Sobic002G184200 Sobic005G045900 Sobic005G045900 Sobic007G155200--Sobic005G045900 Sobic002G140400 Sobic002G140400 Sobic007G155200--Sobic002G140400 Sobic007G155200--Sobic004G037000 Sobic007G155200--Sobic010G196600 Sobic004G228500 Sobic004G228500 Sobic007G155200--Sobic004G228500 Sobic003G349600 Sobic003G349600 Sobic007G155200--Sobic003G349600 Sobic002G139400 Sobic002G139400 Sobic007G155200--Sobic002G139400 Sobic004G127200--Sobic003G033900 Sobic008G187001 Sobic008G187001 Sobic004G127200--Sobic008G187001 Sobic010G063033 Sobic010G063033 Sobic004G127200--Sobic010G063033 Sobic004G127200--Sobic010G196600 Sobic004G127200--Sobic009G224100 Sobic002G388900 Sobic002G388900 Sobic004G127200--Sobic002G388900 Sobic007G036900 Sobic007G036900 Sobic004G127200--Sobic007G036900 Sobic004G127200--Sobic002G184200 Sobic004G127200--Sobic010G084600 Sobic009G194400 Sobic009G194400 Sobic010G196600--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic010G196600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic003G323201 Sobic003G323201 Sobic010G196600--Sobic003G323201 Sobic010G196600--Sobic008G187001 Sobic001G425600 Sobic001G425600 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic002G188900 Sobic002G188900 Sobic003G033900--Sobic002G188900 Sobic003G033900--Sobic001G108200 Sobic004G100700 Sobic004G100700 Sobic003G033900--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G033900--Sobic003G393900 Sobic001G476500 Sobic001G476500 Sobic003G033900--Sobic001G476500 Sobic003G033900--Sobic004G304625 Sobic005G011300 Sobic005G011300 Sobic003G033900--Sobic005G011300 Sobic004G141200 Sobic004G141200 Sobic003G033900--Sobic004G141200 Sobic004G229800 Sobic004G229800 Sobic003G033900--Sobic004G229800 Sobic004G304625--Sobic004G141200 Sobic004G304625--Sobic001G108200 Sobic004G304625--Sobic002G188900 Sobic003G369100 Sobic003G369100 Sobic004G304625--Sobic003G369100 Sobic001G140900 Sobic001G140900 Sobic004G304625--Sobic001G140900 Sobic004G304625--Sobic007G036900 Sobic004G304625--Sobic003G393900 Sobic004G304625--Sobic003G033900 Sobic007G057000 Sobic007G057000 Sobic004G304625--Sobic007G057000 Sobic004G115500--Sobic001G357100 Sobic004G115500--Sobic007G169500 Sobic004G115500--Sobic008G054150 Sobic004G115500--Sobic009G009400 Sobic004G115500--Sobic001G343601 Sobic009G043700 Sobic009G043700 Sobic004G115500--Sobic009G043700 Sobic004G115500--Sobic010G084600 Sobic004G341000 Sobic004G341000 Sobic004G115500--Sobic004G341000 Sobic004G115500--Sobic004G037000
Octagon: transcription factors


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