Gene annotation
Transcriptome id Sobic.004G127200.1
Synonym ATXTH26, Sb04g010980, XTH26
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5Y038
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G28850 : xyloglucan endotransglucosylase/hydrolase 26
RAP-DB (Rice) LOC_Os02g17900.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a019784 , Zm00025a034364 , Zm00025a050765 , Zm00025a054957 , Zm00025a056957 , Zm00025a056955
Brachypodium KQJ94399 , KQK17341
Barley HORVU6Hr1G081590.4 , HORVU4Hr1G028720.1 , HORVU7Hr1G081740.1 , HORVU7Hr1G098330.4 , HORVU7Hr1G098330.5 , HORVU7Hr1G098330.2 , HORVU7Hr1G098330.1 , HORVU7Hr1G098280.2 , HORVU7Hr1G098280.1 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2
Wheat TraesCS6D02G318500 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7B02G326900 , TraesCS7B02G327200 , TraesCS2A02G089000 , TraesCSU02G175000 , TraesCS7D02G339400 , TraesCS2D02G086800 , TraesCS7B02G327000 , TraesCS7A02G426900 , TraesCS2D02G498500 , TraesCS7B02G242900 , TraesCS2D02G431800 , TraesCS7A02G426100 , TraesCS7D02G418700 , TraesCS7D02G419300 , TraesCS7D02G419100 , TraesCS2A02G433800 , TraesCS7A02G427000 , TraesCS7B02G327500 , TraesCS2B02G104700 , TraesCS2B02G454800 , TraesCS7D02G419200 , TraesCS7D02G419600 , TraesCS4D02G142800 , TraesCS4D02G142800 , TraesCS7A02G426600 , TraesCS7A02G426700 , TraesCS2A02G498500 , TraesCS4A02G172600 , TraesCS2D02G498800 , TraesCS7A02G331200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
2 Sobic.008G187001 - K09422: transcription factor MYB, plant
3 Sobic.010G063033 - -
4 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
7 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
8 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
9 Sobic.010G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
11 Sobic.001G114800 - -
12 Sobic.003G427800 Cupin domain containing protein, expressed -
13 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.003G264400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
16 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
17 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
18 Sobic.004G156000 dehydrogenase/reductase, putative, expressed -
19 Sobic.004G228500 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.003G307300 - -


Gene co-expression network
sample Sobic004G127200 Sobic004G127200 Sobic003G033900 Sobic003G033900 Sobic004G127200--Sobic003G033900 Sobic008G187001 Sobic008G187001 Sobic004G127200--Sobic008G187001 Sobic010G063033 Sobic010G063033 Sobic004G127200--Sobic010G063033 Sobic010G196600 Sobic010G196600 Sobic004G127200--Sobic010G196600 Sobic009G224100 Sobic009G224100 Sobic004G127200--Sobic009G224100 Sobic002G388900 Sobic002G388900 Sobic004G127200--Sobic002G388900 Sobic007G036900 Sobic007G036900 Sobic004G127200--Sobic007G036900 Sobic002G184200 Sobic002G184200 Sobic004G127200--Sobic002G184200 Sobic010G084600 Sobic010G084600 Sobic004G127200--Sobic010G084600 Sobic002G188900 Sobic002G188900 Sobic003G033900--Sobic002G188900 Sobic001G108200 Sobic001G108200 Sobic003G033900--Sobic001G108200 Sobic004G100700 Sobic004G100700 Sobic003G033900--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G033900--Sobic003G393900 Sobic001G476500 Sobic001G476500 Sobic003G033900--Sobic001G476500 Sobic004G304625 Sobic004G304625 Sobic003G033900--Sobic004G304625 Sobic005G011300 Sobic005G011300 Sobic003G033900--Sobic005G011300 Sobic004G141200 Sobic004G141200 Sobic003G033900--Sobic004G141200 Sobic004G229800 Sobic004G229800 Sobic003G033900--Sobic004G229800 Sobic008G187001--Sobic002G388900 Sobic001G256700 Sobic001G256700 Sobic008G187001--Sobic001G256700 Sobic008G187001--Sobic007G036900 Sobic008G187001--Sobic009G224100 Sobic004G219800 Sobic004G219800 Sobic008G187001--Sobic004G219800 Sobic009G032000 Sobic009G032000 Sobic008G187001--Sobic009G032000 Sobic001G330100 Sobic001G330100 Sobic008G187001--Sobic001G330100 Sobic009G122400 Sobic009G122400 Sobic008G187001--Sobic009G122400 Sobic004G352000 Sobic004G352000 Sobic008G187001--Sobic004G352000 Sobic003G427800 Sobic003G427800 Sobic010G063033--Sobic003G427800 Sobic010G063033--Sobic002G184200 Sobic009G144600 Sobic009G144600 Sobic010G063033--Sobic009G144600 Sobic010G063033--Sobic004G127200 Sobic004G228500 Sobic004G228500 Sobic010G063033--Sobic004G228500 Sobic010G063033--Sobic008G187001 Sobic009G183900 Sobic009G183900 Sobic010G063033--Sobic009G183900 Sobic001G279701 Sobic001G279701 Sobic010G063033--Sobic001G279701 Sobic006G198700 Sobic006G198700 Sobic010G063033--Sobic006G198700 Sobic009G194400 Sobic009G194400 Sobic010G196600--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic010G196600--Sobic001G425500 Sobic004G109700 Sobic004G109700 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic003G323201 Sobic003G323201 Sobic010G196600--Sobic003G323201 Sobic010G196600--Sobic008G187001 Sobic001G425600 Sobic001G425600 Sobic010G196600--Sobic001G425600 Sobic004G109600 Sobic004G109600 Sobic010G196600--Sobic004G109600 Sobic004G243100 Sobic004G243100 Sobic009G224100--Sobic004G243100 Sobic002G139400 Sobic002G139400 Sobic009G224100--Sobic002G139400 Sobic009G224100--Sobic002G184200 Sobic009G224100--Sobic008G187001 Sobic007G155200 Sobic007G155200 Sobic009G224100--Sobic007G155200 Sobic001G423800 Sobic001G423800 Sobic009G224100--Sobic001G423800 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic009G224100--Sobic001G330100 Sobic002G388900--Sobic008G187001 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic002G388900--Sobic009G032000 Sobic002G388900--Sobic004G352000 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic004G004500 Sobic004G004500 Sobic007G036900--Sobic004G004500 Sobic007G036900--Sobic008G187001 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic007G036900--Sobic004G141200 Sobic002G339000 Sobic002G339000 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic002G184200--Sobic009G224100 Sobic002G184200--Sobic002G139400 Sobic002G184200--Sobic004G243100 Sobic004G221500 Sobic004G221500 Sobic002G184200--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G184200--Sobic007G067400 Sobic010G084700 Sobic010G084700 Sobic002G184200--Sobic010G084700 Sobic002G184200--Sobic007G155200 Sobic007G155100 Sobic007G155100 Sobic002G184200--Sobic007G155100 Sobic002G184200--Sobic001G423800 Sobic010G084600--Sobic002G184200 Sobic003G307300 Sobic003G307300 Sobic010G084600--Sobic003G307300 Sobic006G084600 Sobic006G084600 Sobic010G084600--Sobic006G084600 Sobic010G084600--Sobic004G221500 Sobic004G037000 Sobic004G037000 Sobic010G084600--Sobic004G037000 Sobic010G084600--Sobic007G155200 Sobic002G361100 Sobic002G361100 Sobic010G084600--Sobic002G361100 Sobic010G084600--Sobic009G224100 Sobic001G365100 Sobic001G365100 Sobic010G084600--Sobic001G365100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.