Gene annotation
Transcriptome id Sobic.001G139800.1
Synonym GRF2, AtGRF2, Sb01g012170
Functional annotation growth regulating factor protein, putative, expressed
UniProt C5WPQ0
Pfam PF08880 PF08879
Panther DB PTHR31602 PTHR31602:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0005524ATP binding GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G37740 : growth-regulating factor 2
RAP-DB (Rice) LOC_Os03g47140.1 : growth regulating factor protein, putative, expressed
MaizeGDB (Corn) Zm00025a007487 , Zm00025a015738 , Zm00025a017125
Brachypodium KQK13809 , KQK13808
Barley HORVU4Hr1G010080.6 , HORVU4Hr1G010080.5 , HORVU4Hr1G010080.4 , HORVU4Hr1G010080.3 , HORVU4Hr1G010080.2 , HORVU4Hr1G010080.9 , HORVU4Hr1G010080.12 , HORVU4Hr1G010080.11 , HORVU4Hr1G010080.10
Wheat TraesCS4D02G020300 , TraesCS4D02G059600 , TraesCS4A02G255000 , TraesCS4A02G291500 , TraesCS4B02G060000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G143901 - -
2 Sobic.006G021100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate peroxidase (Os)(PubMedID : 27208977)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
3 Sobic.006G213350 - -
4 Sobic.001G483001 - -
5 Sobic.002G413700 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
6 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
7 Sobic.001G156401 - -
8 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
9 Sobic.009G144400 - -
10 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
11 Sobic.007G089566 - -
12 Sobic.002G209450 - -
13 Sobic.001G150100 - -
14 Sobic.006G157450 - -
15 Sobic.002G207601 - -
16 Sobic.002G226200 - -
17 Sobic.001G245100 - -
18 Sobic.003G219300 leaf senescence related protein, putative, expressed -
19 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
20 Sobic.002G380150 - -


Gene co-expression network
sample Sobic001G139800 Sobic001G139800 Sobic008G143901 Sobic008G143901 Sobic001G139800--Sobic008G143901 Sobic006G021100 Sobic006G021100 Sobic001G139800--Sobic006G021100 Sobic006G213350 Sobic006G213350 Sobic001G139800--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic001G139800--Sobic001G483001 Sobic002G413700 Sobic002G413700 Sobic001G139800--Sobic002G413700 Sobic006G243000 Sobic006G243000 Sobic001G139800--Sobic006G243000 Sobic001G156401 Sobic001G156401 Sobic001G139800--Sobic001G156401 Sobic008G190600 Sobic008G190600 Sobic001G139800--Sobic008G190600 Sobic009G144400 Sobic009G144400 Sobic001G139800--Sobic009G144400 Sobic008G143901--Sobic001G483001 Sobic008G143901--Sobic006G243000 Sobic008G143901--Sobic006G213350 Sobic008G143901--Sobic002G413700 Sobic001G520000 Sobic001G520000 Sobic008G143901--Sobic001G520000 Sobic008G160100 Sobic008G160100 Sobic008G143901--Sobic008G160100 Sobic008G143901--Sobic001G139800 Sobic001G096200 Sobic001G096200 Sobic008G143901--Sobic001G096200 Sobic008G143901--Sobic001G156401 Sobic003G336550 Sobic003G336550 Sobic006G021100--Sobic003G336550 Sobic006G041200 Sobic006G041200 Sobic006G021100--Sobic006G041200 Sobic007G089566 Sobic007G089566 Sobic006G021100--Sobic007G089566 Sobic003G219300 Sobic003G219300 Sobic006G021100--Sobic003G219300 Sobic007G203800 Sobic007G203800 Sobic006G021100--Sobic007G203800 Sobic002G226200 Sobic002G226200 Sobic006G021100--Sobic002G226200 Sobic004G030850 Sobic004G030850 Sobic006G021100--Sobic004G030850 Sobic006G111000 Sobic006G111000 Sobic006G021100--Sobic006G111000 Sobic004G084600 Sobic004G084600 Sobic006G021100--Sobic004G084600 Sobic006G213350--Sobic001G520000 Sobic005G031400 Sobic005G031400 Sobic006G213350--Sobic005G031400 Sobic006G213350--Sobic001G483001 Sobic006G213350--Sobic008G160100 Sobic010G012200 Sobic010G012200 Sobic006G213350--Sobic010G012200 Sobic006G213350--Sobic008G143901 Sobic003G253700 Sobic003G253700 Sobic006G213350--Sobic003G253700 Sobic006G213350--Sobic006G243000 Sobic006G157450 Sobic006G157450 Sobic006G213350--Sobic006G157450 Sobic001G483001--Sobic001G520000 Sobic001G483001--Sobic006G213350 Sobic001G483001--Sobic008G143901 Sobic001G483001--Sobic008G160100 Sobic001G483001--Sobic006G157450 Sobic001G483001--Sobic005G031400 Sobic008G170800 Sobic008G170800 Sobic001G483001--Sobic008G170800 Sobic001G483001--Sobic010G012200 Sobic001G483001--Sobic003G253700 Sobic002G209450 Sobic002G209450 Sobic002G413700--Sobic002G209450 Sobic002G413700--Sobic007G089566 Sobic002G413700--Sobic008G143901 Sobic004G118000 Sobic004G118000 Sobic002G413700--Sobic004G118000 Sobic002G413700--Sobic006G021100 Sobic004G053600 Sobic004G053600 Sobic002G413700--Sobic004G053600 Sobic002G231400 Sobic002G231400 Sobic002G413700--Sobic002G231400 Sobic002G413700--Sobic001G483001 Sobic002G413700--Sobic008G190600 Sobic006G243000--Sobic008G143901 Sobic006G243000--Sobic001G096200 Sobic006G243000--Sobic006G213350 Sobic002G395900 Sobic002G395900 Sobic006G243000--Sobic002G395900 Sobic006G243000--Sobic001G483001 Sobic006G243000--Sobic001G520000 Sobic004G026000 Sobic004G026000 Sobic006G243000--Sobic004G026000 Sobic009G045100 Sobic009G045100 Sobic006G243000--Sobic009G045100 Sobic001G018550 Sobic001G018550 Sobic006G243000--Sobic001G018550 Sobic009G118700 Sobic009G118700 Sobic001G156401--Sobic009G118700 Sobic001G494400 Sobic001G494400 Sobic001G156401--Sobic001G494400 Sobic001G156401--Sobic008G143901 Sobic004G257900 Sobic004G257900 Sobic001G156401--Sobic004G257900 Sobic001G156401--Sobic006G243000 Sobic001G156401--Sobic001G139800 Sobic001G156401--Sobic002G413700 Sobic001G156401--Sobic002G395900 Sobic010G219700 Sobic010G219700 Sobic001G156401--Sobic010G219700 Sobic009G074800 Sobic009G074800 Sobic008G190600--Sobic009G074800 Sobic001G191500 Sobic001G191500 Sobic008G190600--Sobic001G191500 Sobic008G190600--Sobic005G031400 Sobic008G142200 Sobic008G142200 Sobic008G190600--Sobic008G142200 Sobic008G190600--Sobic008G170800 Sobic008G190600--Sobic006G157450 Sobic008G190600--Sobic003G219300 Sobic001G460900 Sobic001G460900 Sobic008G190600--Sobic001G460900 Sobic008G190600--Sobic002G226200 Sobic008G169500 Sobic008G169500 Sobic009G144400--Sobic008G169500 Sobic003G230800 Sobic003G230800 Sobic009G144400--Sobic003G230800 Sobic009G144400--Sobic002G226200 Sobic001G150100 Sobic001G150100 Sobic009G144400--Sobic001G150100 Sobic006G215650 Sobic006G215650 Sobic009G144400--Sobic006G215650 Sobic002G208500 Sobic002G208500 Sobic009G144400--Sobic002G208500 Sobic009G144400--Sobic008G190600 Sobic009G144400--Sobic001G139800 Sobic002G129900 Sobic002G129900 Sobic009G144400--Sobic002G129900
Octagon: transcription factors


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