Gene annotation
Transcriptome id Sobic.001G166800.1,Sobic.001G166800.2
Synonym 1, CYCD5, Sb01g014590
Functional annotation cyclin, putative, expressed
UniProt A0A1Z5S6J8 , C5WSA9
Pfam PF00134 PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF248
NCBI CDD -
KEGG Orthology K18811; cyclin D5, plant
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT4G37630 : cyclin d5;1
RAP-DB (Rice) LOC_Os03g42070.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a007404 , Zm00025a017305
Brachypodium KQK14165
Barley HORVU4Hr1G013700.5 , HORVU4Hr1G013700.1 , HORVU4Hr1G013700.2 , HORVU3Hr1G105610.1 , HORVU3Hr1G105610.2 , HORVU3Hr1G105610.3 , HORVU4Hr1G013700.11 , HORVU4Hr1G013700.10 , HORVU4Hr1G013700.9 , HORVU4Hr1G013700.7 , HORVU4Hr1G013700.3
Wheat TraesCS4B02G080500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G516200 expressed protein -
2 Sobic.001G414200 expressed protein -
3 Sobic.004G233500 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
4 Sobic.010G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family domain containing protein, expressed -
5 Sobic.006G163650 - -
6 Sobic.006G111500 expressed protein -
7 Sobic.010G267650 - -
8 Sobic.010G156800 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.005G076650 - -
10 Sobic.003G397000 expressed protein -
11 Sobic.001G029900 protein kinase domain containing protein, expressed -
12 Sobic.003G100200 TOO MANY MOUTHS precursor, putative, expressed -
13 Sobic.001G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
14 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.002G010500 expressed protein -
16 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
18 Sobic.004G107400 expressed protein -
19 Sobic.003G359200 DUF740 domain containing protein, expressed -
20 Sobic.001G002300 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G166800 Sobic001G166800 Sobic001G516200 Sobic001G516200 Sobic001G166800--Sobic001G516200 Sobic001G414200 Sobic001G414200 Sobic001G166800--Sobic001G414200 Sobic004G233500 Sobic004G233500 Sobic001G166800--Sobic004G233500 Sobic010G040200 Sobic010G040200 Sobic001G166800--Sobic010G040200 Sobic006G163650 Sobic006G163650 Sobic001G166800--Sobic006G163650 Sobic006G111500 Sobic006G111500 Sobic001G166800--Sobic006G111500 Sobic010G267650 Sobic010G267650 Sobic001G166800--Sobic010G267650 Sobic010G156800 Sobic010G156800 Sobic001G166800--Sobic010G156800 Sobic005G076650 Sobic005G076650 Sobic001G166800--Sobic005G076650 Sobic003G191800 Sobic003G191800 Sobic001G516200--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic001G516200--Sobic005G102200 Sobic010G152700 Sobic010G152700 Sobic001G516200--Sobic010G152700 Sobic001G483700 Sobic001G483700 Sobic001G516200--Sobic001G483700 Sobic007G072400 Sobic007G072400 Sobic001G516200--Sobic007G072400 Sobic007G183000 Sobic007G183000 Sobic001G516200--Sobic007G183000 Sobic002G285525 Sobic002G285525 Sobic001G516200--Sobic002G285525 Sobic004G226300 Sobic004G226300 Sobic001G516200--Sobic004G226300 Sobic007G139000 Sobic007G139000 Sobic001G516200--Sobic007G139000 Sobic007G153300 Sobic007G153300 Sobic001G414200--Sobic007G153300 Sobic001G414200--Sobic006G163650 Sobic003G006500 Sobic003G006500 Sobic001G414200--Sobic003G006500 Sobic003G359200 Sobic003G359200 Sobic001G414200--Sobic003G359200 Sobic004G156600 Sobic004G156600 Sobic001G414200--Sobic004G156600 Sobic009G163700 Sobic009G163700 Sobic001G414200--Sobic009G163700 Sobic003G406500 Sobic003G406500 Sobic001G414200--Sobic003G406500 Sobic004G128800 Sobic004G128800 Sobic001G414200--Sobic004G128800 Sobic005G168500 Sobic005G168500 Sobic001G414200--Sobic005G168500 Sobic002G078850 Sobic002G078850 Sobic004G233500--Sobic002G078850 Sobic004G107400 Sobic004G107400 Sobic004G233500--Sobic004G107400 Sobic004G233500--Sobic010G152700 Sobic001G179680 Sobic001G179680 Sobic004G233500--Sobic001G179680 Sobic004G233500--Sobic003G191800 Sobic006G171000 Sobic006G171000 Sobic004G233500--Sobic006G171000 Sobic001G137200 Sobic001G137200 Sobic004G233500--Sobic001G137200 Sobic003G104900 Sobic003G104900 Sobic004G233500--Sobic003G104900 Sobic009G028600 Sobic009G028600 Sobic004G233500--Sobic009G028600 Sobic003G128500 Sobic003G128500 Sobic010G040200--Sobic003G128500 Sobic010G040200--Sobic010G267650 Sobic010G040200--Sobic001G516200 Sobic001G029900 Sobic001G029900 Sobic010G040200--Sobic001G029900 Sobic010G040200--Sobic005G076650 Sobic010G040200--Sobic010G156800 Sobic010G040200--Sobic006G111500 Sobic010G040200--Sobic001G166800 Sobic003G284500 Sobic003G284500 Sobic010G040200--Sobic003G284500 Sobic006G163650--Sobic007G139000 Sobic010G014900 Sobic010G014900 Sobic006G163650--Sobic010G014900 Sobic006G163650--Sobic004G107400 Sobic006G163650--Sobic010G152700 Sobic006G163650--Sobic003G191800 Sobic006G163650--Sobic003G359200 Sobic006G163650--Sobic007G153300 Sobic006G163650--Sobic005G102200 Sobic007G158400 Sobic007G158400 Sobic006G163650--Sobic007G158400 Sobic009G157000 Sobic009G157000 Sobic006G111500--Sobic009G157000 Sobic006G111500--Sobic001G516200 Sobic004G123600 Sobic004G123600 Sobic006G111500--Sobic004G123600 Sobic006G111500--Sobic007G139000 Sobic006G111500--Sobic010G267650 Sobic002G285450 Sobic002G285450 Sobic006G111500--Sobic002G285450 Sobic004G310700 Sobic004G310700 Sobic006G111500--Sobic004G310700 Sobic006G111500--Sobic003G191800 Sobic004G132400 Sobic004G132400 Sobic006G111500--Sobic004G132400 Sobic005G003900 Sobic005G003900 Sobic010G267650--Sobic005G003900 Sobic010G267650--Sobic003G128500 Sobic001G262500 Sobic001G262500 Sobic010G267650--Sobic001G262500 Sobic010G267650--Sobic006G111500 Sobic007G090448 Sobic007G090448 Sobic010G267650--Sobic007G090448 Sobic009G230400 Sobic009G230400 Sobic010G267650--Sobic009G230400 Sobic006G073001 Sobic006G073001 Sobic010G267650--Sobic006G073001 Sobic010G267650--Sobic004G310700 Sobic007G159800 Sobic007G159800 Sobic010G267650--Sobic007G159800 Sobic010G156800--Sobic001G483700 Sobic010G156800--Sobic005G102200 Sobic006G169300 Sobic006G169300 Sobic010G156800--Sobic006G169300 Sobic009G223700 Sobic009G223700 Sobic010G156800--Sobic009G223700 Sobic010G156800--Sobic001G516200 Sobic010G156800--Sobic007G183000 Sobic010G156800--Sobic003G191800 Sobic010G156800--Sobic001G137200 Sobic004G224300 Sobic004G224300 Sobic010G156800--Sobic004G224300 Sobic008G098098 Sobic008G098098 Sobic005G076650--Sobic008G098098 Sobic007G016000 Sobic007G016000 Sobic005G076650--Sobic007G016000 Sobic009G088401 Sobic009G088401 Sobic005G076650--Sobic009G088401 Sobic004G043200 Sobic004G043200 Sobic005G076650--Sobic004G043200 Sobic005G076650--Sobic007G072400 Sobic005G076650--Sobic010G152700 Sobic008G119200 Sobic008G119200 Sobic005G076650--Sobic008G119200 Sobic005G076650--Sobic001G516200 Sobic006G273500 Sobic006G273500 Sobic005G076650--Sobic006G273500
Octagon: transcription factors


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