Gene annotation
Transcriptome id Sobic.001G193600.1
Synonym ATMGL, Sb01g017060, MGL
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cystathionine gamma-synthase, putative, expressed
UniProt C5WVD4
Pfam PF01053
Panther DB PTHR11808 PTHR11808:SF55
NCBI CDD KOG0053; Cystathionine beta-lyases/cystathionine gamma-synthases
KEGG Orthology K01761; methionine-gamma-lyase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64660 : methionine gamma-lyase
RAP-DB (Rice) LOC_Os10g37340.1 : cystathionine gamma-synthase, putative, expressed
MaizeGDB (Corn) Zm00025a017419 , Zm00025a006291
Brachypodium KQJ97468
Barley HORVU0Hr1G000340.2 , HORVU0Hr1G000340.4 , HORVU0Hr1G000340.1 , HORVU0Hr1G000340.3
Wheat TraesCS6B02G001700 , TraesCS1B02G199600 , TraesCS6B02G003900 , TraesCS1A02G181000 , TraesCS1D02G184500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G111600 WRKY89, expressed -
2 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
3 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.008G131800 zinc knuckle family protein, expressed -
5 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
6 Sobic.004G239000 - -
7 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
8 Sobic.001G525000 polygalacturonase, putative, expressed -
9 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
10 Sobic.002G387100 X8 domain containing protein, expressed -
11 Sobic.007G204500 expressed protein -
12 Sobic.004G251350 - -
13 Sobic.007G013100 OsFBX142 - F-box domain containing protein, expressed -
14 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
15 Sobic.003G367401 - -
16 Sobic.010G179150 - -
17 Sobic.002G284800 expressed protein -
18 Sobic.007G122300 - -
19 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
20 Sobic.001G255700 - -


Gene co-expression network
sample Sobic001G193600 Sobic001G193600 Sobic007G111600 Sobic007G111600 Sobic001G193600--Sobic007G111600 Sobic007G116600 Sobic007G116600 Sobic001G193600--Sobic007G116600 Sobic003G099500 Sobic003G099500 Sobic001G193600--Sobic003G099500 Sobic008G131800 Sobic008G131800 Sobic001G193600--Sobic008G131800 Sobic001G460800 Sobic001G460800 Sobic001G193600--Sobic001G460800 Sobic004G239000 Sobic004G239000 Sobic001G193600--Sobic004G239000 Sobic002G004100 Sobic002G004100 Sobic001G193600--Sobic002G004100 Sobic001G525000 Sobic001G525000 Sobic001G193600--Sobic001G525000 Sobic002G430200 Sobic002G430200 Sobic001G193600--Sobic002G430200 Sobic007G111600--Sobic008G131800 Sobic010G179150 Sobic010G179150 Sobic007G111600--Sobic010G179150 Sobic004G251350 Sobic004G251350 Sobic007G111600--Sobic004G251350 Sobic007G204500 Sobic007G204500 Sobic007G111600--Sobic007G204500 Sobic007G111600--Sobic007G116600 Sobic007G111600--Sobic004G239000 Sobic007G111600--Sobic003G099500 Sobic001G016900 Sobic001G016900 Sobic007G111600--Sobic001G016900 Sobic007G013100 Sobic007G013100 Sobic007G111600--Sobic007G013100 Sobic007G116600--Sobic007G111600 Sobic007G116600--Sobic007G013100 Sobic007G116600--Sobic003G099500 Sobic007G116600--Sobic001G016900 Sobic007G116600--Sobic007G204500 Sobic007G116600--Sobic004G239000 Sobic007G116600--Sobic008G131800 Sobic007G116600--Sobic010G179150 Sobic007G116600--Sobic004G251350 Sobic003G099500--Sobic004G239000 Sobic002G387100 Sobic002G387100 Sobic003G099500--Sobic002G387100 Sobic003G099500--Sobic002G430200 Sobic003G099500--Sobic001G016900 Sobic007G122300 Sobic007G122300 Sobic003G099500--Sobic007G122300 Sobic002G284800 Sobic002G284800 Sobic003G099500--Sobic002G284800 Sobic003G099500--Sobic008G131800 Sobic003G368150 Sobic003G368150 Sobic003G099500--Sobic003G368150 Sobic003G099500--Sobic007G111600 Sobic008G131800--Sobic004G239000 Sobic008G131800--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic008G131800--Sobic001G255700 Sobic008G131800--Sobic003G368150 Sobic008G131800--Sobic007G111600 Sobic008G131800--Sobic010G179150 Sobic008G131800--Sobic007G122300 Sobic008G131800--Sobic003G099500 Sobic008G131800--Sobic001G016900 Sobic001G460800--Sobic001G525000 Sobic003G167825 Sobic003G167825 Sobic001G460800--Sobic003G167825 Sobic001G460800--Sobic002G004100 Sobic002G320900 Sobic002G320900 Sobic001G460800--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic001G460800--Sobic003G120400 Sobic007G093400 Sobic007G093400 Sobic001G460800--Sobic007G093400 Sobic009G085600 Sobic009G085600 Sobic001G460800--Sobic009G085600 Sobic002G284901 Sobic002G284901 Sobic001G460800--Sobic002G284901 Sobic001G460800--Sobic001G016900 Sobic004G239000--Sobic003G099500 Sobic004G239000--Sobic008G131800 Sobic004G239000--Sobic002G284800 Sobic004G239000--Sobic002G430200 Sobic004G239000--Sobic001G016900 Sobic004G239000--Sobic003G368150 Sobic004G239000--Sobic001G255700 Sobic004G239000--Sobic002G387100 Sobic004G239000--Sobic007G122300 Sobic002G004100--Sobic001G016900 Sobic002G004100--Sobic009G085600 Sobic002G004100--Sobic007G111600 Sobic002G004100--Sobic003G167825 Sobic002G004100--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G004100--Sobic003G367401 Sobic002G004100--Sobic004G239000 Sobic002G004100--Sobic003G099500 Sobic004G016600 Sobic004G016600 Sobic002G004100--Sobic004G016600 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic001G525000--Sobic003G367401 Sobic001G525000--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic001G525000--Sobic002G210200 Sobic003G200501 Sobic003G200501 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400 Sobic002G430200--Sobic002G387100 Sobic002G430200--Sobic007G122300 Sobic002G430200--Sobic003G099500 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic010G201000 Sobic010G201000 Sobic002G430200--Sobic010G201000 Sobic002G430200--Sobic002G284800
Octagon: transcription factors


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