Gene annotation
Transcriptome id Sobic.001G242700.1
Synonym BPM1, Sb01g021460, ATBPM1
Functional annotation MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5X1F1
Pfam PF00917 PF00651
Panther DB PTHR26379 PTHR26379:SF148
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os10g28780.1 : MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G303400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G157700 BURP domain containing protein, expressed -
2 Sobic.006G143800 - -
3 Sobic.003G119750 - -
4 Sobic.003G354166 - -
5 Sobic.007G004750 - -
6 Sobic.005G008101 - -
7 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
8 Sobic.003G200400 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
9 Sobic.002G394433 - -
10 Sobic.003G168350 - -
11 Sobic.002G014900 OsFBD13 - F-box and FBD domain containing protein, expressed -
12 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
13 Sobic.003G089700 - -
14 Sobic.003G168800 photosystem II reaction center protein H, putative, expressed K02709: photosystem II PsbH protein
15 Sobic.004G198701 - -
16 Sobic.003G255850 - -
17 Sobic.002G150032 - -
18 Sobic.006G005550 - -
19 Sobic.006G124850 - K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
20 Sobic.006G020350 - -


Gene co-expression network
sample Sobic001G242700 Sobic001G242700 Sobic008G157700 Sobic008G157700 Sobic001G242700--Sobic008G157700 Sobic006G143800 Sobic006G143800 Sobic001G242700--Sobic006G143800 Sobic003G119750 Sobic003G119750 Sobic001G242700--Sobic003G119750 Sobic003G354166 Sobic003G354166 Sobic001G242700--Sobic003G354166 Sobic007G004750 Sobic007G004750 Sobic001G242700--Sobic007G004750 Sobic005G008101 Sobic005G008101 Sobic001G242700--Sobic005G008101 Sobic001G293900 Sobic001G293900 Sobic001G242700--Sobic001G293900 Sobic003G200400 Sobic003G200400 Sobic001G242700--Sobic003G200400 Sobic002G394433 Sobic002G394433 Sobic001G242700--Sobic002G394433 Sobic006G124850 Sobic006G124850 Sobic008G157700--Sobic006G124850 Sobic003G168350 Sobic003G168350 Sobic008G157700--Sobic003G168350 Sobic003G128575 Sobic003G128575 Sobic008G157700--Sobic003G128575 Sobic006G017266 Sobic006G017266 Sobic008G157700--Sobic006G017266 Sobic002G014900 Sobic002G014900 Sobic008G157700--Sobic002G014900 Sobic005G183450 Sobic005G183450 Sobic008G157700--Sobic005G183450 Sobic006G020350 Sobic006G020350 Sobic008G157700--Sobic006G020350 Sobic008G157700--Sobic001G293900 Sobic002G150032 Sobic002G150032 Sobic008G157700--Sobic002G150032 Sobic003G288500 Sobic003G288500 Sobic006G143800--Sobic003G288500 Sobic006G143800--Sobic003G119750 Sobic006G143800--Sobic003G354166 Sobic006G143800--Sobic001G293900 Sobic006G192600 Sobic006G192600 Sobic006G143800--Sobic006G192600 Sobic006G143800--Sobic008G157700 Sobic002G002000 Sobic002G002000 Sobic006G143800--Sobic002G002000 Sobic003G168800 Sobic003G168800 Sobic006G143800--Sobic003G168800 Sobic006G143800--Sobic007G004750 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic003G119750--Sobic007G004750 Sobic010G132200 Sobic010G132200 Sobic003G119750--Sobic010G132200 Sobic003G119750--Sobic003G168800 Sobic003G423400 Sobic003G423400 Sobic003G119750--Sobic003G423400 Sobic003G119750--Sobic006G192600 Sobic001G128000 Sobic001G128000 Sobic003G119750--Sobic001G128000 Sobic003G169400 Sobic003G169400 Sobic003G119750--Sobic003G169400 Sobic003G354166--Sobic001G293900 Sobic003G354166--Sobic007G004750 Sobic003G255850 Sobic003G255850 Sobic003G354166--Sobic003G255850 Sobic003G354166--Sobic003G128575 Sobic003G354166--Sobic003G119750 Sobic003G354166--Sobic006G017266 Sobic003G354166--Sobic005G183450 Sobic003G354166--Sobic010G132200 Sobic003G354166--Sobic006G124850 Sobic007G004750--Sobic001G293900 Sobic007G004750--Sobic003G119750 Sobic007G004750--Sobic010G132200 Sobic007G004750--Sobic003G168800 Sobic007G004750--Sobic003G354166 Sobic007G004750--Sobic003G344300 Sobic007G004750--Sobic008G157700 Sobic007G004750--Sobic003G423400 Sobic007G004750--Sobic003G169400 Sobic004G201800 Sobic004G201800 Sobic005G008101--Sobic004G201800 Sobic003G290050 Sobic003G290050 Sobic005G008101--Sobic003G290050 Sobic006G078450 Sobic006G078450 Sobic005G008101--Sobic006G078450 Sobic003G089700 Sobic003G089700 Sobic005G008101--Sobic003G089700 Sobic005G008101--Sobic005G183450 Sobic005G008101--Sobic006G020350 Sobic005G008101--Sobic006G124850 Sobic008G035633 Sobic008G035633 Sobic005G008101--Sobic008G035633 Sobic005G008101--Sobic006G017266 Sobic001G293900--Sobic003G119750 Sobic001G293900--Sobic010G132200 Sobic001G293900--Sobic003G169400 Sobic001G293900--Sobic003G168800 Sobic003G172850 Sobic003G172850 Sobic001G293900--Sobic003G172850 Sobic001G293900--Sobic003G423400 Sobic001G293900--Sobic006G124850 Sobic001G293900--Sobic006G192600 Sobic003G168500 Sobic003G168500 Sobic001G293900--Sobic003G168500 Sobic004G198701 Sobic004G198701 Sobic003G200400--Sobic004G198701 Sobic003G200400--Sobic003G168350 Sobic001G365332 Sobic001G365332 Sobic003G200400--Sobic001G365332 Sobic002G174000 Sobic002G174000 Sobic003G200400--Sobic002G174000 Sobic005G008400 Sobic005G008400 Sobic003G200400--Sobic005G008400 Sobic001G260900 Sobic001G260900 Sobic003G200400--Sobic001G260900 Sobic003G200400--Sobic008G157700 Sobic006G005550 Sobic006G005550 Sobic003G200400--Sobic006G005550 Sobic004G346700 Sobic004G346700 Sobic003G200400--Sobic004G346700 Sobic002G394433--Sobic006G020350 Sobic002G394433--Sobic005G183450 Sobic002G394433--Sobic003G128575 Sobic002G394433--Sobic006G017266 Sobic002G394433--Sobic001G365332 Sobic002G394433--Sobic006G005550 Sobic005G093600 Sobic005G093600 Sobic002G394433--Sobic005G093600 Sobic002G394433--Sobic003G168350 Sobic002G394433--Sobic006G078450
Octagon: transcription factors


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