Gene annotation
Transcriptome id Sobic.001G275400.1
Synonym Sb01g027030
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5WPW7
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF203
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT2G42990 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os09g07290.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a003684
Brachypodium KQK08977 , KQJ86943 , PNT64278 , PNT64277 , KQJ89652
Barley HORVU5Hr1G051500.6 , HORVU6Hr1G035210.1 , HORVU6Hr1G035210.3 , HORVU6Hr1G035210.2
Wheat TraesCS6D02G161900 , TraesCS5B02G164400 , TraesCS5D02G171800 , TraesCS6B02G200400 , TraesCS7D02G384600 , TraesCS5A02G167400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G060750 - -
2 Sobic.001G098700 GRAM domain containing protein, expressed -
3 Sobic.005G199151 - -
4 Sobic.004G351000 - -
5 Sobic.001G302100 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
6 Sobic.003G303800 tesmin/TSO1-like CXC domain containing protein, expressed -
7 Sobic.002G246950 - -
8 Sobic.010G018200 expressed protein -
9 Sobic.003G050100 polygalacturonase, putative, expressed -
10 Sobic.004G342200 myb-like DNA-binding domain containing protein, expressed -
11 Sobic.008G029000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY40, expressed -
12 Sobic.002G274300 - -
13 Sobic.005G187800 - -
14 Sobic.002G180732 - -
15 Sobic.002G390200 pentatricopeptide, putative, expressed -
16 Sobic.003G375400 - -
17 Sobic.002G232300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR15 - Auxin-responsive SAUR gene family member -
18 Sobic.003G160433 - -
19 Sobic.001G508700 expressed protein -
20 Sobic.005G216900 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G275400 Sobic001G275400 Sobic002G060750 Sobic002G060750 Sobic001G275400--Sobic002G060750 Sobic001G098700 Sobic001G098700 Sobic001G275400--Sobic001G098700 Sobic005G199151 Sobic005G199151 Sobic001G275400--Sobic005G199151 Sobic004G351000 Sobic004G351000 Sobic001G275400--Sobic004G351000 Sobic001G302100 Sobic001G302100 Sobic001G275400--Sobic001G302100 Sobic003G303800 Sobic003G303800 Sobic001G275400--Sobic003G303800 Sobic002G246950 Sobic002G246950 Sobic001G275400--Sobic002G246950 Sobic010G018200 Sobic010G018200 Sobic001G275400--Sobic010G018200 Sobic003G050100 Sobic003G050100 Sobic001G275400--Sobic003G050100 Sobic002G060750--Sobic002G246950 Sobic002G060750--Sobic001G275400 Sobic002G060750--Sobic003G303800 Sobic003G398900 Sobic003G398900 Sobic002G060750--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic002G060750--Sobic003G018400 Sobic007G094000 Sobic007G094000 Sobic002G060750--Sobic007G094000 Sobic002G060750--Sobic001G302100 Sobic002G274300 Sobic002G274300 Sobic002G060750--Sobic002G274300 Sobic002G264700 Sobic002G264700 Sobic002G060750--Sobic002G264700 Sobic003G330350 Sobic003G330350 Sobic001G098700--Sobic003G330350 Sobic001G098700--Sobic003G050100 Sobic006G057100 Sobic006G057100 Sobic001G098700--Sobic006G057100 Sobic009G192200 Sobic009G192200 Sobic001G098700--Sobic009G192200 Sobic003G233266 Sobic003G233266 Sobic001G098700--Sobic003G233266 Sobic001G270800 Sobic001G270800 Sobic001G098700--Sobic001G270800 Sobic003G218950 Sobic003G218950 Sobic001G098700--Sobic003G218950 Sobic003G169000 Sobic003G169000 Sobic001G098700--Sobic003G169000 Sobic006G131700 Sobic006G131700 Sobic001G098700--Sobic006G131700 Sobic005G199151--Sobic004G351000 Sobic002G180732 Sobic002G180732 Sobic005G199151--Sobic002G180732 Sobic008G029000 Sobic008G029000 Sobic005G199151--Sobic008G029000 Sobic002G232300 Sobic002G232300 Sobic005G199151--Sobic002G232300 Sobic005G199151--Sobic010G018200 Sobic005G187800 Sobic005G187800 Sobic005G199151--Sobic005G187800 Sobic009G087480 Sobic009G087480 Sobic005G199151--Sobic009G087480 Sobic001G259850 Sobic001G259850 Sobic005G199151--Sobic001G259850 Sobic002G390200 Sobic002G390200 Sobic005G199151--Sobic002G390200 Sobic004G351000--Sobic005G199151 Sobic004G351000--Sobic002G232300 Sobic004G351000--Sobic008G029000 Sobic004G351000--Sobic001G259850 Sobic004G351000--Sobic010G018200 Sobic004G351000--Sobic002G180732 Sobic004G351000--Sobic005G187800 Sobic001G343700 Sobic001G343700 Sobic004G351000--Sobic001G343700 Sobic004G351000--Sobic009G087480 Sobic003G249300 Sobic003G249300 Sobic001G302100--Sobic003G249300 Sobic002G341600 Sobic002G341600 Sobic001G302100--Sobic002G341600 Sobic004G125701 Sobic004G125701 Sobic001G302100--Sobic004G125701 Sobic001G540250 Sobic001G540250 Sobic001G302100--Sobic001G540250 Sobic004G125600 Sobic004G125600 Sobic001G302100--Sobic004G125600 Sobic001G217800 Sobic001G217800 Sobic001G302100--Sobic001G217800 Sobic004G019700 Sobic004G019700 Sobic001G302100--Sobic004G019700 Sobic007G099300 Sobic007G099300 Sobic001G302100--Sobic007G099300 Sobic001G124500 Sobic001G124500 Sobic001G302100--Sobic001G124500 Sobic003G303800--Sobic007G094000 Sobic007G052500 Sobic007G052500 Sobic003G303800--Sobic007G052500 Sobic003G303800--Sobic002G246950 Sobic001G283800 Sobic001G283800 Sobic003G303800--Sobic001G283800 Sobic003G303800--Sobic002G060750 Sobic003G303800--Sobic002G274300 Sobic009G160300 Sobic009G160300 Sobic003G303800--Sobic009G160300 Sobic003G303800--Sobic003G398900 Sobic003G303800--Sobic001G540250 Sobic002G246950--Sobic002G060750 Sobic002G246950--Sobic003G398900 Sobic002G246950--Sobic003G018400 Sobic002G246950--Sobic003G303800 Sobic001G378150 Sobic001G378150 Sobic002G246950--Sobic001G378150 Sobic002G411700 Sobic002G411700 Sobic002G246950--Sobic002G411700 Sobic002G285950 Sobic002G285950 Sobic002G246950--Sobic002G285950 Sobic002G149550 Sobic002G149550 Sobic002G246950--Sobic002G149550 Sobic002G246950--Sobic007G094000 Sobic010G018200--Sobic008G029000 Sobic005G065050 Sobic005G065050 Sobic010G018200--Sobic005G065050 Sobic009G147450 Sobic009G147450 Sobic010G018200--Sobic009G147450 Sobic003G003300 Sobic003G003300 Sobic010G018200--Sobic003G003300 Sobic004G024350 Sobic004G024350 Sobic010G018200--Sobic004G024350 Sobic004G230000 Sobic004G230000 Sobic010G018200--Sobic004G230000 Sobic003G050100--Sobic003G330350 Sobic003G160300 Sobic003G160300 Sobic003G050100--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic003G050100--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic003G050100--Sobic007G085900 Sobic003G050100--Sobic006G057100 Sobic003G050100--Sobic009G192200 Sobic003G050100--Sobic003G218950 Sobic005G216900 Sobic005G216900 Sobic003G050100--Sobic005G216900 Sobic003G050100--Sobic002G390200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.