Gene annotation
Transcriptome id Sobic.001G508700.1
Synonym Sb01g047490
Functional annotation expressed protein
UniProt A0A1Z5SBM6
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45540 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os03g04840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ90126
Barley HORVU7Hr1G036050.1
Wheat TraesCS7A02G052100 , TraesCS7D02G047700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G060750 - -
2 Sobic.001G275400 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.002G246950 - -
4 Sobic.002G264700 RNA recognition motif containing protein, putative, expressed -
5 Sobic.003G398900 tetratricopeptide-like helical, putative, expressed -
6 Sobic.003G018400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G428900 S-domain receptor-like protein kinase, putative, expressed -
8 Sobic.010G258600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.003G303800 tesmin/TSO1-like CXC domain containing protein, expressed -
10 Sobic.003G336400 pentatricopeptide, putative, expressed -
11 Sobic.002G188000 receptor kinase, putative, expressed -
12 Sobic.002G142000 B3 DNA binding domain containing protein, expressed -
13 Sobic.002G171200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
14 Sobic.007G084400 - -
15 Sobic.005G161000 expressed protein -
16 Sobic.003G325000 expressed protein -
17 Sobic.007G070600 purine permease, putative, expressed -
18 Sobic.001G378150 - -
19 Sobic.002G285950 - -
20 Sobic.005G017900 OsFBD13 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G508700 Sobic001G508700 Sobic002G060750 Sobic002G060750 Sobic001G508700--Sobic002G060750 Sobic001G275400 Sobic001G275400 Sobic001G508700--Sobic001G275400 Sobic002G246950 Sobic002G246950 Sobic001G508700--Sobic002G246950 Sobic002G264700 Sobic002G264700 Sobic001G508700--Sobic002G264700 Sobic003G398900 Sobic003G398900 Sobic001G508700--Sobic003G398900 Sobic003G018400 Sobic003G018400 Sobic001G508700--Sobic003G018400 Sobic001G428900 Sobic001G428900 Sobic001G508700--Sobic001G428900 Sobic010G258600 Sobic010G258600 Sobic001G508700--Sobic010G258600 Sobic003G303800 Sobic003G303800 Sobic001G508700--Sobic003G303800 Sobic002G060750--Sobic002G246950 Sobic002G060750--Sobic001G275400 Sobic002G060750--Sobic003G303800 Sobic002G060750--Sobic003G398900 Sobic002G060750--Sobic003G018400 Sobic007G094000 Sobic007G094000 Sobic002G060750--Sobic007G094000 Sobic001G302100 Sobic001G302100 Sobic002G060750--Sobic001G302100 Sobic002G274300 Sobic002G274300 Sobic002G060750--Sobic002G274300 Sobic002G060750--Sobic002G264700 Sobic001G275400--Sobic002G060750 Sobic001G098700 Sobic001G098700 Sobic001G275400--Sobic001G098700 Sobic005G199151 Sobic005G199151 Sobic001G275400--Sobic005G199151 Sobic004G351000 Sobic004G351000 Sobic001G275400--Sobic004G351000 Sobic001G275400--Sobic001G302100 Sobic001G275400--Sobic003G303800 Sobic001G275400--Sobic002G246950 Sobic010G018200 Sobic010G018200 Sobic001G275400--Sobic010G018200 Sobic003G050100 Sobic003G050100 Sobic001G275400--Sobic003G050100 Sobic002G246950--Sobic002G060750 Sobic002G246950--Sobic003G398900 Sobic002G246950--Sobic003G018400 Sobic002G246950--Sobic003G303800 Sobic001G378150 Sobic001G378150 Sobic002G246950--Sobic001G378150 Sobic002G411700 Sobic002G411700 Sobic002G246950--Sobic002G411700 Sobic002G285950 Sobic002G285950 Sobic002G246950--Sobic002G285950 Sobic002G149550 Sobic002G149550 Sobic002G246950--Sobic002G149550 Sobic002G246950--Sobic007G094000 Sobic003G192801 Sobic003G192801 Sobic002G264700--Sobic003G192801 Sobic010G217466 Sobic010G217466 Sobic002G264700--Sobic010G217466 Sobic010G173550 Sobic010G173550 Sobic002G264700--Sobic010G173550 Sobic002G171200 Sobic002G171200 Sobic002G264700--Sobic002G171200 Sobic002G264700--Sobic001G378150 Sobic002G264700--Sobic002G246950 Sobic002G295550 Sobic002G295550 Sobic002G264700--Sobic002G295550 Sobic002G264700--Sobic002G149550 Sobic009G221701 Sobic009G221701 Sobic002G264700--Sobic009G221701 Sobic003G398900--Sobic002G246950 Sobic003G398900--Sobic002G411700 Sobic005G161000 Sobic005G161000 Sobic003G398900--Sobic005G161000 Sobic001G484500 Sobic001G484500 Sobic003G398900--Sobic001G484500 Sobic003G336400 Sobic003G336400 Sobic003G398900--Sobic003G336400 Sobic003G398900--Sobic003G303800 Sobic003G398900--Sobic002G060750 Sobic009G160300 Sobic009G160300 Sobic003G398900--Sobic009G160300 Sobic006G116600 Sobic006G116600 Sobic003G398900--Sobic006G116600 Sobic003G018400--Sobic002G246950 Sobic003G018400--Sobic010G217466 Sobic003G018400--Sobic002G060750 Sobic003G018400--Sobic001G378150 Sobic003G018400--Sobic002G149550 Sobic003G018400--Sobic009G221701 Sobic003G018400--Sobic002G285950 Sobic003G018400--Sobic002G411700 Sobic003G018400--Sobic002G264700 Sobic001G428900--Sobic002G264700 Sobic001G428900--Sobic003G018400 Sobic001G428900--Sobic002G246950 Sobic001G428900--Sobic009G221701 Sobic001G428900--Sobic002G149550 Sobic001G428900--Sobic010G217466 Sobic001G428900--Sobic010G173550 Sobic007G070600 Sobic007G070600 Sobic001G428900--Sobic007G070600 Sobic001G428900--Sobic002G171200 Sobic010G258600--Sobic003G336400 Sobic005G008301 Sobic005G008301 Sobic010G258600--Sobic005G008301 Sobic010G258600--Sobic002G171200 Sobic001G177200 Sobic001G177200 Sobic010G258600--Sobic001G177200 Sobic010G069000 Sobic010G069000 Sobic010G258600--Sobic010G069000 Sobic010G258600--Sobic002G264700 Sobic010G258600--Sobic005G161000 Sobic010G258600--Sobic003G398900 Sobic010G258600--Sobic001G378150 Sobic003G303800--Sobic007G094000 Sobic007G052500 Sobic007G052500 Sobic003G303800--Sobic007G052500 Sobic003G303800--Sobic002G246950 Sobic001G283800 Sobic001G283800 Sobic003G303800--Sobic001G283800 Sobic003G303800--Sobic002G060750 Sobic003G303800--Sobic002G274300 Sobic003G303800--Sobic009G160300 Sobic003G303800--Sobic003G398900 Sobic001G540250 Sobic001G540250 Sobic003G303800--Sobic001G540250
Octagon: transcription factors


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