Gene annotation
Transcriptome id Sobic.001G297200.1
Synonym HB4, ATHB-4, ATHB4, Sb01g029000
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5WRJ5
Pfam PF02183 PF00046 PF04618
Panther DB PTHR24326 PTHR24326:SF251
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT3G60390 : homeobox-leucine zipper protein 3
RAP-DB (Rice) LOC_Os10g41230.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a001412 , Zm00025a028268 , Zm00025a005382 , Zm00025a003364 , Zm00025a010325 , Zm00025a017100 , Zm00025a052979 , Zm00025a047209 , Zm00025a014052 , Zm00025a050084 , Zm00025a050086
Brachypodium KQJ90458 , KQJ83922 , PNT76669 , KQK19923 , KQJ98582 , KQJ97808 , KQK22747
Barley HORVU7Hr1G018780.13 , HORVU7Hr1G018780.12 , HORVU7Hr1G018780.11 , HORVU7Hr1G018780.14 , HORVU5Hr1G067010.13 , HORVU5Hr1G067010.10 , HORVU5Hr1G067010.15 , HORVU5Hr1G067010.14 , HORVU4Hr1G065900.7 , HORVU1Hr1G055930.1 , HORVU1Hr1G055930.3 , HORVU1Hr1G055930.2 , HORVU1Hr1G055930.5 , HORVU4Hr1G065900.4 , HORVU1Hr1G055930.6 , HORVU2Hr1G097940.5 , HORVU2Hr1G097940.4 , HORVU2Hr1G097940.7 , HORVU2Hr1G097940.6 , HORVU2Hr1G097940.1 , HORVU2Hr1G097940.3 , HORVU2Hr1G097940.2 , HORVU2Hr1G097940.9 , HORVU2Hr1G097940.8 , HORVU5Hr1G067010.12 , HORVU5Hr1G067010.11 , HORVU1Hr1G055930.4 , HORVU5Hr1G067010.9 , HORVU5Hr1G067010.3 , HORVU5Hr1G067010.2 , HORVU5Hr1G067010.1 , HORVU5Hr1G067010.7 , HORVU5Hr1G067010.6 , HORVU5Hr1G067010.4 , HORVU7Hr1G018780.3 , HORVU7Hr1G018780.2 , HORVU7Hr1G018780.7 , HORVU7Hr1G018780.6 , HORVU7Hr1G018780.5 , HORVU7Hr1G018780.4 , HORVU7Hr1G018780.9 , HORVU7Hr1G018780.8 , HORVU5Hr1G049790.1 , HORVU5Hr1G049790.2 , HORVU2Hr1G097940.11 , HORVU2Hr1G097940.10 , HORVU4Hr1G065900.6 , HORVU4Hr1G065900.3 , HORVU4Hr1G065900.1 , HORVU1Hr1G082910.3 , HORVU1Hr1G082910.2 , HORVU4Hr1G065900.5 , HORVU4Hr1G065900.8 , HORVU4Hr1G065900.9 , HORVU7Hr1G098230.2 , HORVU7Hr1G098230.1 , HORVU4Hr1G065900.10
Wheat TraesCS1D02G379700 , TraesCS7D02G078900 , TraesCS7A02G423800 , TraesCS7D02G417700 , TraesCS1B02G232700 , TraesCS1D02G220900 , TraesCS7A02G083800 , TraesCS2B02G434900 , TraesCS4A02G059600 , TraesCS4A02G382300 , TraesCS7B02G326300 , TraesCS7D02G078800 , TraesCS4A02G382200 , TraesCS4A02G382400 , TraesCS4D02G236600 , TraesCS7A02G084000 , TraesCS1B02G232700 , TraesCS5D02G235300 , TraesCS1A02G372900 , TraesCS4B02G235300 , TraesCS4B02G235300 , TraesCS2D02G412900 , TraesCS2A02G415900 , TraesCS1B02G393100 , TraesCS5A02G232700 , TraesCS1A02G219200 , TraesCS7D02G079000 , TraesCS5B02G231300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G027700 expressed protein -
2 Sobic.010G242700 expressed protein -
3 Sobic.008G040600 bZIP transcription factor domain containing protein, expressed -
4 Sobic.001G230801 - -
5 Sobic.009G157800 transporter family protein, putative, expressed -
6 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
7 Sobic.004G180100 - -
8 Sobic.001G342101 - -
9 Sobic.001G505600 DENN domain containing protein, expressed -
10 Sobic.001G234500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
12 Sobic.005G110505 - -
13 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
14 Sobic.003G065100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.005G144000 glycosyltransferase, putative, expressed -
16 Sobic.002G423700 - -
17 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
18 Sobic.001G378300 Sucrose synthase 4(PubMedID : 26186930)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@Sucrose synthase 2 SUS2 (Os)(PubMedID : 27208977)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
19 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.001G183633 - -


Gene co-expression network
sample Sobic001G297200 Sobic001G297200 Sobic009G027700 Sobic009G027700 Sobic001G297200--Sobic009G027700 Sobic010G242700 Sobic010G242700 Sobic001G297200--Sobic010G242700 Sobic008G040600 Sobic008G040600 Sobic001G297200--Sobic008G040600 Sobic001G230801 Sobic001G230801 Sobic001G297200--Sobic001G230801 Sobic009G157800 Sobic009G157800 Sobic001G297200--Sobic009G157800 Sobic008G122800 Sobic008G122800 Sobic001G297200--Sobic008G122800 Sobic004G180100 Sobic004G180100 Sobic001G297200--Sobic004G180100 Sobic001G342101 Sobic001G342101 Sobic001G297200--Sobic001G342101 Sobic001G505600 Sobic001G505600 Sobic001G297200--Sobic001G505600 Sobic009G027700--Sobic004G180100 Sobic001G234500 Sobic001G234500 Sobic009G027700--Sobic001G234500 Sobic005G110505 Sobic005G110505 Sobic009G027700--Sobic005G110505 Sobic009G027700--Sobic008G122800 Sobic007G138000 Sobic007G138000 Sobic009G027700--Sobic007G138000 Sobic009G027700--Sobic001G230801 Sobic001G183633 Sobic001G183633 Sobic009G027700--Sobic001G183633 Sobic007G101600 Sobic007G101600 Sobic009G027700--Sobic007G101600 Sobic003G065100 Sobic003G065100 Sobic009G027700--Sobic003G065100 Sobic010G242700--Sobic001G342101 Sobic008G055600 Sobic008G055600 Sobic010G242700--Sobic008G055600 Sobic003G187700 Sobic003G187700 Sobic010G242700--Sobic003G187700 Sobic010G242700--Sobic001G183633 Sobic010G242700--Sobic008G122800 Sobic005G144000 Sobic005G144000 Sobic010G242700--Sobic005G144000 Sobic004G253200 Sobic004G253200 Sobic010G242700--Sobic004G253200 Sobic010G242700--Sobic003G065100 Sobic010G242700--Sobic004G180100 Sobic008G040600--Sobic009G027700 Sobic008G040600--Sobic003G065100 Sobic008G040600--Sobic001G234500 Sobic006G064450 Sobic006G064450 Sobic008G040600--Sobic006G064450 Sobic002G087600 Sobic002G087600 Sobic008G040600--Sobic002G087600 Sobic008G040600--Sobic008G122800 Sobic005G052400 Sobic005G052400 Sobic008G040600--Sobic005G052400 Sobic005G144500 Sobic005G144500 Sobic008G040600--Sobic005G144500 Sobic001G345500 Sobic001G345500 Sobic008G040600--Sobic001G345500 Sobic004G038500 Sobic004G038500 Sobic001G230801--Sobic004G038500 Sobic001G072000 Sobic001G072000 Sobic001G230801--Sobic001G072000 Sobic005G050400 Sobic005G050400 Sobic001G230801--Sobic005G050400 Sobic008G156600 Sobic008G156600 Sobic001G230801--Sobic008G156600 Sobic001G112600 Sobic001G112600 Sobic001G230801--Sobic001G112600 Sobic003G005700 Sobic003G005700 Sobic001G230801--Sobic003G005700 Sobic001G230801--Sobic004G180100 Sobic001G230801--Sobic005G144000 Sobic004G279200 Sobic004G279200 Sobic001G230801--Sobic004G279200 Sobic009G157800--Sobic005G144000 Sobic008G071300 Sobic008G071300 Sobic009G157800--Sobic008G071300 Sobic004G154100 Sobic004G154100 Sobic009G157800--Sobic004G154100 Sobic009G157800--Sobic008G122800 Sobic001G039100 Sobic001G039100 Sobic009G157800--Sobic001G039100 Sobic009G157800--Sobic004G180100 Sobic001G503600 Sobic001G503600 Sobic009G157800--Sobic001G503600 Sobic003G212000 Sobic003G212000 Sobic009G157800--Sobic003G212000 Sobic002G170100 Sobic002G170100 Sobic009G157800--Sobic002G170100 Sobic008G122800--Sobic004G180100 Sobic008G122800--Sobic005G144000 Sobic008G122800--Sobic002G170100 Sobic001G279000 Sobic001G279000 Sobic008G122800--Sobic001G279000 Sobic008G122800--Sobic001G234500 Sobic008G122800--Sobic001G183633 Sobic003G013900 Sobic003G013900 Sobic008G122800--Sobic003G013900 Sobic003G441000 Sobic003G441000 Sobic008G122800--Sobic003G441000 Sobic009G086600 Sobic009G086600 Sobic008G122800--Sobic009G086600 Sobic004G180100--Sobic001G234500 Sobic004G180100--Sobic009G086600 Sobic004G042501 Sobic004G042501 Sobic004G180100--Sobic004G042501 Sobic010G145000 Sobic010G145000 Sobic004G180100--Sobic010G145000 Sobic005G170400 Sobic005G170400 Sobic004G180100--Sobic005G170400 Sobic004G180100--Sobic001G183633 Sobic004G180100--Sobic008G122800 Sobic008G176500 Sobic008G176500 Sobic004G180100--Sobic008G176500 Sobic010G034400 Sobic010G034400 Sobic004G180100--Sobic010G034400 Sobic001G342101--Sobic008G055600 Sobic001G342101--Sobic005G144000 Sobic001G342101--Sobic003G187700 Sobic001G342101--Sobic004G253200 Sobic001G342101--Sobic003G441000 Sobic001G342101--Sobic001G279000 Sobic010G189432 Sobic010G189432 Sobic001G342101--Sobic010G189432 Sobic001G342101--Sobic005G050400 Sobic001G400000 Sobic001G400000 Sobic001G342101--Sobic001G400000 Sobic003G372200 Sobic003G372200 Sobic001G505600--Sobic003G372200 Sobic001G378800 Sobic001G378800 Sobic001G505600--Sobic001G378800 Sobic010G065200 Sobic010G065200 Sobic001G505600--Sobic010G065200 Sobic001G385000 Sobic001G385000 Sobic001G505600--Sobic001G385000 Sobic001G486900 Sobic001G486900 Sobic001G505600--Sobic001G486900 Sobic002G070300 Sobic002G070300 Sobic001G505600--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G505600--Sobic008G132200 Sobic001G424800 Sobic001G424800 Sobic001G505600--Sobic001G424800 Sobic003G394500 Sobic003G394500 Sobic001G505600--Sobic003G394500
Octagon: transcription factors


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