Gene annotation
Transcriptome id Sobic.001G349200.1
Synonym 3BETAHSD/D1, AT3BETAHSD/D1
Functional annotation sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed
UniProt A0A1B6QMR8
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF471
NCBI CDD KOG1430; C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT1G47290 : 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1
RAP-DB (Rice) LOC_Os03g29170.1 : sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G118180.6 , HORVU7Hr1G118180.4 , HORVU7Hr1G118180.5 , HORVU7Hr1G118180.2 , HORVU7Hr1G118180.3 , HORVU7Hr1G118180.1
Wheat TraesCS5D02G006300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
2 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
3 Sobic.008G077900 exostosin family domain containing protein, expressed -
4 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
5 Sobic.010G096700 leaf senescence related protein, putative, expressed -
6 Sobic.003G001300 ZOS1-05 - C2H2 zinc finger protein, expressed -
7 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
8 Sobic.005G093101 - -
9 Sobic.002G235800 expressed protein -
10 Sobic.002G391900 peroxidase precursor, putative, expressed -
11 Sobic.003G083800 DNA binding protein, putative, expressed -
12 Sobic.003G382200 methyltransferase domain containing protein, expressed -
13 Sobic.010G152500 glycosyltransferase, putative, expressed -
14 Sobic.004G322000 hypro1, putative, expressed -
15 Sobic.001G506700 exostosin family domain containing protein, expressed -
16 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
18 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
19 Sobic.001G506600 exostosin family domain containing protein, expressed -
20 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G349200 Sobic001G349200 Sobic009G106100 Sobic009G106100 Sobic001G349200--Sobic009G106100 Sobic006G209000 Sobic006G209000 Sobic001G349200--Sobic006G209000 Sobic008G077900 Sobic008G077900 Sobic001G349200--Sobic008G077900 Sobic006G205500 Sobic006G205500 Sobic001G349200--Sobic006G205500 Sobic010G096700 Sobic010G096700 Sobic001G349200--Sobic010G096700 Sobic003G001300 Sobic003G001300 Sobic001G349200--Sobic003G001300 Sobic001G274400 Sobic001G274400 Sobic001G349200--Sobic001G274400 Sobic005G093101 Sobic005G093101 Sobic001G349200--Sobic005G093101 Sobic002G235800 Sobic002G235800 Sobic001G349200--Sobic002G235800 Sobic003G083800 Sobic003G083800 Sobic009G106100--Sobic003G083800 Sobic010G152500 Sobic010G152500 Sobic009G106100--Sobic010G152500 Sobic004G009200 Sobic004G009200 Sobic009G106100--Sobic004G009200 Sobic003G382200 Sobic003G382200 Sobic009G106100--Sobic003G382200 Sobic005G106300 Sobic005G106300 Sobic009G106100--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic009G106100--Sobic007G111800 Sobic002G391900 Sobic002G391900 Sobic009G106100--Sobic002G391900 Sobic005G216600 Sobic005G216600 Sobic009G106100--Sobic005G216600 Sobic005G197400 Sobic005G197400 Sobic009G106100--Sobic005G197400 Sobic007G154100 Sobic007G154100 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic001G503000 Sobic001G503000 Sobic006G209000--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic001G506600 Sobic001G506600 Sobic006G209000--Sobic001G506600 Sobic006G209000--Sobic009G106100 Sobic008G077900--Sobic003G001300 Sobic005G222600 Sobic005G222600 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic004G322000 Sobic004G322000 Sobic008G077900--Sobic004G322000 Sobic002G239700 Sobic002G239700 Sobic008G077900--Sobic002G239700 Sobic009G060700 Sobic009G060700 Sobic008G077900--Sobic009G060700 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic005G071700 Sobic005G071700 Sobic008G077900--Sobic005G071700 Sobic006G205500--Sobic008G077900 Sobic006G117500 Sobic006G117500 Sobic006G205500--Sobic006G117500 Sobic006G205500--Sobic003G001300 Sobic006G205500--Sobic010G096700 Sobic006G205500--Sobic001G506600 Sobic006G205500--Sobic002G239700 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic006G205500--Sobic004G322000 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic003G215300 Sobic003G215300 Sobic010G096700--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic010G096700--Sobic005G104200 Sobic005G066300 Sobic005G066300 Sobic010G096700--Sobic005G066300 Sobic010G096700--Sobic001G274400 Sobic005G115300 Sobic005G115300 Sobic010G096700--Sobic005G115300 Sobic003G001300--Sobic008G077900 Sobic003G001300--Sobic009G060700 Sobic003G001300--Sobic005G222600 Sobic003G001300--Sobic010G152500 Sobic008G138700 Sobic008G138700 Sobic003G001300--Sobic008G138700 Sobic006G092100 Sobic006G092100 Sobic003G001300--Sobic006G092100 Sobic003G001300--Sobic007G154100 Sobic003G001300--Sobic004G322000 Sobic010G152300 Sobic010G152300 Sobic003G001300--Sobic010G152300 Sobic004G014600 Sobic004G014600 Sobic001G274400--Sobic004G014600 Sobic009G165100 Sobic009G165100 Sobic001G274400--Sobic009G165100 Sobic001G274400--Sobic010G152500 Sobic001G274400--Sobic004G322000 Sobic001G274400--Sobic003G382200 Sobic001G274400--Sobic007G090600 Sobic001G274400--Sobic002G029600 Sobic006G031100 Sobic006G031100 Sobic001G274400--Sobic006G031100 Sobic006G135300 Sobic006G135300 Sobic001G274400--Sobic006G135300 Sobic007G057400 Sobic007G057400 Sobic005G093101--Sobic007G057400 Sobic003G007400 Sobic003G007400 Sobic005G093101--Sobic003G007400 Sobic005G093101--Sobic010G096700 Sobic005G093101--Sobic003G001300 Sobic005G093101--Sobic008G077900 Sobic001G360500 Sobic001G360500 Sobic005G093101--Sobic001G360500 Sobic005G093101--Sobic001G349200 Sobic001G506800 Sobic001G506800 Sobic005G093101--Sobic001G506800 Sobic002G343100 Sobic002G343100 Sobic005G093101--Sobic002G343100 Sobic002G235800--Sobic005G066300 Sobic002G235800--Sobic006G117500 Sobic002G411000 Sobic002G411000 Sobic002G235800--Sobic002G411000 Sobic002G235800--Sobic010G096700 Sobic009G015166 Sobic009G015166 Sobic002G235800--Sobic009G015166 Sobic002G235800--Sobic005G104200 Sobic002G235800--Sobic001G506600 Sobic001G238500 Sobic001G238500 Sobic002G235800--Sobic001G238500 Sobic002G235800--Sobic006G205500
Octagon: transcription factors


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