Gene annotation
Transcriptome id Sobic.001G375500.1
Synonym Sb01g035660
Functional annotation strictosidine synthase, putative, expressed
UniProt A0A1B6QNB3
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF34
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os08g07810.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a039537 , Zm00025a039639 , Zm00025a002405 , Zm00025a002403 , Zm00025a002402 , Zm00025a002400 , Zm00025a039540 , Zm00025a002406 , Zm00025a039641
Brachypodium KQJ90062 , KQK10870 , KQJ91975
Barley HORVU2Hr1G013460.2 , HORVU2Hr1G013460.1 , HORVU2Hr1G012970.4 , HORVU2Hr1G012970.3 , HORVU2Hr1G012970.2 , HORVU2Hr1G012970.1 , HORVU3Hr1G065520.3 , HORVU5Hr1G009400.1 , HORVU5Hr1G009400.2 , HORVU3Hr1G065520.2 , HORVU6Hr1G026020.2 , HORVU6Hr1G026020.3 , HORVU6Hr1G026020.1 , HORVU3Hr1G065520.1
Wheat TraesCS5D02G389100 , TraesCS2D02G076200 , TraesCS2B02G092900 , TraesCS2D02G076300 , TraesCS5B02G383000 , TraesCS5B02G382800 , TraesCS3B02G289800 , TraesCS3D02G256900 , TraesCSU02G189700 , TraesCS2D02G076400 , TraesCS2A02G078000 , TraesCS2D02G076000 , TraesCS2B02G093000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G003900 cytochrome P450, putative, expressed -
2 Sobic.005G011900 - -
3 Sobic.005G203700 - -
4 Sobic.001G449100 E2F-related protein, putative, expressed -
5 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
6 Sobic.010G156400 expressed protein -
7 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
8 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
9 Sobic.004G138900 AAT1, putative, expressed -
10 Sobic.002G150866 - -
11 Sobic.002G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@SCP-like extracellular protein, expressed -
12 Sobic.001G539300 expressed protein -
13 Sobic.001G539300 expressed protein -
14 Sobic.001G539300 expressed protein -
15 Sobic.001G539300 expressed protein -
16 Sobic.001G539300 expressed protein -
17 Sobic.001G539300 expressed protein -
18 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G162233 - -
20 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic001G375500 Sobic001G375500 Sobic007G003900 Sobic007G003900 Sobic001G375500--Sobic007G003900 Sobic005G011900 Sobic005G011900 Sobic001G375500--Sobic005G011900 Sobic005G203700 Sobic005G203700 Sobic001G375500--Sobic005G203700 Sobic001G449100 Sobic001G449100 Sobic001G375500--Sobic001G449100 Sobic007G054900 Sobic007G054900 Sobic001G375500--Sobic007G054900 Sobic010G156400 Sobic010G156400 Sobic001G375500--Sobic010G156400 Sobic002G154900 Sobic002G154900 Sobic001G375500--Sobic002G154900 Sobic001G242000 Sobic001G242000 Sobic001G375500--Sobic001G242000 Sobic004G138900 Sobic004G138900 Sobic001G375500--Sobic004G138900 Sobic001G246900 Sobic001G246900 Sobic007G003900--Sobic001G246900 Sobic006G198000 Sobic006G198000 Sobic007G003900--Sobic006G198000 Sobic007G003900--Sobic010G156400 Sobic004G292600 Sobic004G292600 Sobic007G003900--Sobic004G292600 Sobic001G539300 Sobic001G539300 Sobic007G003900--Sobic001G539300 Sobic005G011900--Sobic010G156400 Sobic005G011900--Sobic001G539300 Sobic001G162233 Sobic001G162233 Sobic005G011900--Sobic001G162233 Sobic005G011900--Sobic004G292600 Sobic009G178550 Sobic009G178550 Sobic005G203700--Sobic009G178550 Sobic005G203700--Sobic001G539300 Sobic005G203700--Sobic010G156400 Sobic005G203700--Sobic005G011900 Sobic003G079200 Sobic003G079200 Sobic001G449100--Sobic003G079200 Sobic002G243000 Sobic002G243000 Sobic001G449100--Sobic002G243000 Sobic008G158600 Sobic008G158600 Sobic001G449100--Sobic008G158600 Sobic006G240600 Sobic006G240600 Sobic001G449100--Sobic006G240600 Sobic002G369400 Sobic002G369400 Sobic001G449100--Sobic002G369400 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic002G063800 Sobic002G063800 Sobic001G449100--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic001G449100--Sobic004G161751 Sobic010G009900 Sobic010G009900 Sobic007G054900--Sobic010G009900 Sobic007G054900--Sobic001G242000 Sobic007G054900--Sobic008G158600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic007G054900--Sobic005G011900 Sobic007G054900--Sobic002G369400 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic010G156400--Sobic001G539300 Sobic010G156400--Sobic001G246900 Sobic010G156400--Sobic009G178550 Sobic008G184700 Sobic008G184700 Sobic010G156400--Sobic008G184700 Sobic005G067933 Sobic005G067933 Sobic002G154900--Sobic005G067933 Sobic002G154900--Sobic008G158600 Sobic002G154900--Sobic001G162233 Sobic002G154900--Sobic007G054900 Sobic002G154900--Sobic004G292600 Sobic002G154900--Sobic005G011900 Sobic002G154900--Sobic002G012300 Sobic001G211200 Sobic001G211200 Sobic002G154900--Sobic001G211200 Sobic002G154900--Sobic010G156400 Sobic001G242000--Sobic007G054900 Sobic001G242000--Sobic002G369400 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic010G270700 Sobic010G270700 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic006G050800 Sobic006G050800 Sobic001G242000--Sobic006G050800 Sobic001G242000--Sobic010G009900 Sobic001G242000--Sobic001G449100 Sobic005G102300 Sobic005G102300 Sobic004G138900--Sobic005G102300 Sobic005G101900 Sobic005G101900 Sobic004G138900--Sobic005G101900 Sobic009G144800 Sobic009G144800 Sobic004G138900--Sobic009G144800 Sobic010G016850 Sobic010G016850 Sobic004G138900--Sobic010G016850 Sobic008G156500 Sobic008G156500 Sobic004G138900--Sobic008G156500 Sobic002G150866 Sobic002G150866 Sobic004G138900--Sobic002G150866 Sobic006G010100 Sobic006G010100 Sobic004G138900--Sobic006G010100 Sobic004G138900--Sobic001G242000 Sobic010G223800 Sobic010G223800 Sobic004G138900--Sobic010G223800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.