Gene annotation
Transcriptome id Sobic.004G138900.1
Synonym CAT5
Functional annotation AAT1, putative, expressed
UniProt A0A194YPK2
Pfam -
Panther DB PTHR11785 PTHR11785:SF230
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G34960 : cationic amino acid transporter 5
RAP-DB (Rice) LOC_Os03g43980.1 : AAT1, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK14010
Barley -
Wheat TraesCS5A02G375600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G102300 dirigent, putative, expressed -
2 Sobic.005G101900 O-methyltransferase, putative, expressed -
3 Sobic.009G144800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G016850 - -
5 Sobic.008G156500 ankyrin-1, putative, expressed -
6 Sobic.002G150866 - -
7 Sobic.006G010100 terpene synthase, putative, expressed -
8 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
9 Sobic.010G223800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
10 Sobic.007G003900 cytochrome P450, putative, expressed -
11 Sobic.010G137366 - -
12 Sobic.005G011900 - -
13 Sobic.009G071100 acid phosphatase, putative, expressed -
14 Sobic.009G144900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G449100 E2F-related protein, putative, expressed -
16 Sobic.005G069800 OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed -
17 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
18 Sobic.005G070200 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.004G022900 expressed protein -
20 Sobic.002G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic004G138900 Sobic004G138900 Sobic005G102300 Sobic005G102300 Sobic004G138900--Sobic005G102300 Sobic005G101900 Sobic005G101900 Sobic004G138900--Sobic005G101900 Sobic009G144800 Sobic009G144800 Sobic004G138900--Sobic009G144800 Sobic010G016850 Sobic010G016850 Sobic004G138900--Sobic010G016850 Sobic008G156500 Sobic008G156500 Sobic004G138900--Sobic008G156500 Sobic002G150866 Sobic002G150866 Sobic004G138900--Sobic002G150866 Sobic006G010100 Sobic006G010100 Sobic004G138900--Sobic006G010100 Sobic001G242000 Sobic001G242000 Sobic004G138900--Sobic001G242000 Sobic010G223800 Sobic010G223800 Sobic004G138900--Sobic010G223800 Sobic005G102300--Sobic004G138900 Sobic005G102300--Sobic005G101900 Sobic005G102300--Sobic009G144800 Sobic005G102300--Sobic006G010100 Sobic005G102300--Sobic008G156500 Sobic009G144900 Sobic009G144900 Sobic005G102300--Sobic009G144900 Sobic010G137366 Sobic010G137366 Sobic005G102300--Sobic010G137366 Sobic001G195300 Sobic001G195300 Sobic005G102300--Sobic001G195300 Sobic005G110454 Sobic005G110454 Sobic005G102300--Sobic005G110454 Sobic005G101900--Sobic005G102300 Sobic005G101900--Sobic009G144800 Sobic005G101900--Sobic004G138900 Sobic002G369400 Sobic002G369400 Sobic005G101900--Sobic002G369400 Sobic005G101900--Sobic009G144900 Sobic005G101900--Sobic006G010100 Sobic005G101900--Sobic001G242000 Sobic005G070200 Sobic005G070200 Sobic005G101900--Sobic005G070200 Sobic005G011900 Sobic005G011900 Sobic005G101900--Sobic005G011900 Sobic009G144800--Sobic009G144900 Sobic005G177600 Sobic005G177600 Sobic009G144800--Sobic005G177600 Sobic001G114900 Sobic001G114900 Sobic009G144800--Sobic001G114900 Sobic009G144800--Sobic005G070200 Sobic002G010900 Sobic002G010900 Sobic009G144800--Sobic002G010900 Sobic008G022000 Sobic008G022000 Sobic009G144800--Sobic008G022000 Sobic009G144800--Sobic005G101900 Sobic009G144800--Sobic002G369400 Sobic009G144800--Sobic005G110454 Sobic010G016850--Sobic005G177600 Sobic004G189500 Sobic004G189500 Sobic010G016850--Sobic004G189500 Sobic010G016850--Sobic009G144900 Sobic010G210100 Sobic010G210100 Sobic010G016850--Sobic010G210100 Sobic009G145500 Sobic009G145500 Sobic010G016850--Sobic009G145500 Sobic009G145600 Sobic009G145600 Sobic010G016850--Sobic009G145600 Sobic009G184100 Sobic009G184100 Sobic010G016850--Sobic009G184100 Sobic004G148200 Sobic004G148200 Sobic010G016850--Sobic004G148200 Sobic009G145700 Sobic009G145700 Sobic010G016850--Sobic009G145700 Sobic008G156500--Sobic004G138900 Sobic008G156500--Sobic005G102300 Sobic007G215600 Sobic007G215600 Sobic008G156500--Sobic007G215600 Sobic008G156500--Sobic005G101900 Sobic008G156500--Sobic006G010100 Sobic004G240100 Sobic004G240100 Sobic008G156500--Sobic004G240100 Sobic005G101600 Sobic005G101600 Sobic008G156500--Sobic005G101600 Sobic010G072100 Sobic010G072100 Sobic008G156500--Sobic010G072100 Sobic008G158100 Sobic008G158100 Sobic008G156500--Sobic008G158100 Sobic002G150866--Sobic004G138900 Sobic009G071100 Sobic009G071100 Sobic002G150866--Sobic009G071100 Sobic005G215500 Sobic005G215500 Sobic002G150866--Sobic005G215500 Sobic007G003900 Sobic007G003900 Sobic002G150866--Sobic007G003900 Sobic002G150866--Sobic005G102300 Sobic002G023200 Sobic002G023200 Sobic002G150866--Sobic002G023200 Sobic001G449100 Sobic001G449100 Sobic002G150866--Sobic001G449100 Sobic002G150866--Sobic010G223800 Sobic002G150866--Sobic007G215600 Sobic006G235000 Sobic006G235000 Sobic006G010100--Sobic006G235000 Sobic001G185450 Sobic001G185450 Sobic006G010100--Sobic001G185450 Sobic002G063800 Sobic002G063800 Sobic006G010100--Sobic002G063800 Sobic004G245700 Sobic004G245700 Sobic006G010100--Sobic004G245700 Sobic006G010100--Sobic009G145600 Sobic010G062300 Sobic010G062300 Sobic006G010100--Sobic010G062300 Sobic003G043500 Sobic003G043500 Sobic006G010100--Sobic003G043500 Sobic006G010100--Sobic009G145500 Sobic004G315200 Sobic004G315200 Sobic006G010100--Sobic004G315200 Sobic007G054900 Sobic007G054900 Sobic001G242000--Sobic007G054900 Sobic001G242000--Sobic002G369400 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic010G270700 Sobic010G270700 Sobic001G242000--Sobic010G270700 Sobic001G242000--Sobic010G062300 Sobic006G050800 Sobic006G050800 Sobic001G242000--Sobic006G050800 Sobic010G009900 Sobic010G009900 Sobic001G242000--Sobic010G009900 Sobic001G242000--Sobic001G449100 Sobic001G246900 Sobic001G246900 Sobic010G223800--Sobic001G246900 Sobic001G539300 Sobic001G539300 Sobic010G223800--Sobic001G539300 Sobic010G156400 Sobic010G156400 Sobic010G223800--Sobic010G156400 Sobic010G223800--Sobic004G138900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.