Gene annotation
Transcriptome id Sobic.010G137366.1
Synonym -
Functional annotation -
UniProt A0A1W0VSV3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G102300 dirigent, putative, expressed -
2 Sobic.004G138900 AAT1, putative, expressed -
3 Sobic.010G036800 expressed protein -
4 Sobic.003G423500 SbGlu1 promoter sequences(-2000 bp to -1 bp) bound and upregulated by SbSTOP1(PubMedID : 30387379)@"beta-1,3-glucanase, localized throuout cytoplasm and nuclei with no specific subcellular localization"(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.001G449100 E2F-related protein, putative, expressed -
6 Sobic.005G101900 O-methyltransferase, putative, expressed -
7 Sobic.009G144800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.005G011900 - -
10 Sobic.010G069200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
11 Sobic.006G240600 - -
12 Sobic.009G144900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G224200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
14 Sobic.005G215500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
15 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
17 Sobic.007G003900 cytochrome P450, putative, expressed -
18 Sobic.008G156500 ankyrin-1, putative, expressed -
19 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
20 Sobic.005G111400 lipase, putative, expressed -


Gene co-expression network
sample Sobic010G137366 Sobic010G137366 Sobic005G102300 Sobic005G102300 Sobic010G137366--Sobic005G102300 Sobic004G138900 Sobic004G138900 Sobic010G137366--Sobic004G138900 Sobic010G036800 Sobic010G036800 Sobic010G137366--Sobic010G036800 Sobic003G423500 Sobic003G423500 Sobic010G137366--Sobic003G423500 Sobic001G449100 Sobic001G449100 Sobic010G137366--Sobic001G449100 Sobic005G101900 Sobic005G101900 Sobic010G137366--Sobic005G101900 Sobic009G144800 Sobic009G144800 Sobic010G137366--Sobic009G144800 Sobic006G121500 Sobic006G121500 Sobic010G137366--Sobic006G121500 Sobic005G011900 Sobic005G011900 Sobic010G137366--Sobic005G011900 Sobic005G102300--Sobic004G138900 Sobic005G102300--Sobic005G101900 Sobic005G102300--Sobic009G144800 Sobic006G010100 Sobic006G010100 Sobic005G102300--Sobic006G010100 Sobic008G156500 Sobic008G156500 Sobic005G102300--Sobic008G156500 Sobic009G144900 Sobic009G144900 Sobic005G102300--Sobic009G144900 Sobic005G102300--Sobic010G137366 Sobic001G195300 Sobic001G195300 Sobic005G102300--Sobic001G195300 Sobic005G110454 Sobic005G110454 Sobic005G102300--Sobic005G110454 Sobic004G138900--Sobic005G102300 Sobic004G138900--Sobic005G101900 Sobic004G138900--Sobic009G144800 Sobic010G016850 Sobic010G016850 Sobic004G138900--Sobic010G016850 Sobic004G138900--Sobic008G156500 Sobic002G150866 Sobic002G150866 Sobic004G138900--Sobic002G150866 Sobic004G138900--Sobic006G010100 Sobic001G242000 Sobic001G242000 Sobic004G138900--Sobic001G242000 Sobic010G223800 Sobic010G223800 Sobic004G138900--Sobic010G223800 Sobic006G101100 Sobic006G101100 Sobic010G036800--Sobic006G101100 Sobic009G069700 Sobic009G069700 Sobic010G036800--Sobic009G069700 Sobic001G247300 Sobic001G247300 Sobic010G036800--Sobic001G247300 Sobic003G158500 Sobic003G158500 Sobic010G036800--Sobic003G158500 Sobic010G259300 Sobic010G259300 Sobic010G036800--Sobic010G259300 Sobic006G240600 Sobic006G240600 Sobic010G036800--Sobic006G240600 Sobic010G078600 Sobic010G078600 Sobic010G036800--Sobic010G078600 Sobic003G092900 Sobic003G092900 Sobic010G036800--Sobic003G092900 Sobic003G313100 Sobic003G313100 Sobic010G036800--Sobic003G313100 Sobic003G035700 Sobic003G035700 Sobic003G423500--Sobic003G035700 Sobic010G069200 Sobic010G069200 Sobic003G423500--Sobic010G069200 Sobic001G119000 Sobic001G119000 Sobic003G423500--Sobic001G119000 Sobic001G054400 Sobic001G054400 Sobic003G423500--Sobic001G054400 Sobic007G171000 Sobic007G171000 Sobic003G423500--Sobic007G171000 Sobic003G423500--Sobic010G078600 Sobic004G195300 Sobic004G195300 Sobic003G423500--Sobic004G195300 Sobic004G147900 Sobic004G147900 Sobic003G423500--Sobic004G147900 Sobic009G155200 Sobic009G155200 Sobic003G423500--Sobic009G155200 Sobic003G079200 Sobic003G079200 Sobic001G449100--Sobic003G079200 Sobic002G243000 Sobic002G243000 Sobic001G449100--Sobic002G243000 Sobic008G158600 Sobic008G158600 Sobic001G449100--Sobic008G158600 Sobic001G449100--Sobic006G240600 Sobic002G369400 Sobic002G369400 Sobic001G449100--Sobic002G369400 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic002G063800 Sobic002G063800 Sobic001G449100--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic001G449100--Sobic004G161751 Sobic005G101900--Sobic005G102300 Sobic005G101900--Sobic009G144800 Sobic005G101900--Sobic004G138900 Sobic005G101900--Sobic002G369400 Sobic005G101900--Sobic009G144900 Sobic005G101900--Sobic006G010100 Sobic005G101900--Sobic001G242000 Sobic005G070200 Sobic005G070200 Sobic005G101900--Sobic005G070200 Sobic005G101900--Sobic005G011900 Sobic009G144800--Sobic009G144900 Sobic005G177600 Sobic005G177600 Sobic009G144800--Sobic005G177600 Sobic001G114900 Sobic001G114900 Sobic009G144800--Sobic001G114900 Sobic009G144800--Sobic005G070200 Sobic002G010900 Sobic002G010900 Sobic009G144800--Sobic002G010900 Sobic008G022000 Sobic008G022000 Sobic009G144800--Sobic008G022000 Sobic009G144800--Sobic005G101900 Sobic009G144800--Sobic002G369400 Sobic009G144800--Sobic005G110454 Sobic001G401100 Sobic001G401100 Sobic006G121500--Sobic001G401100 Sobic002G055600 Sobic002G055600 Sobic006G121500--Sobic002G055600 Sobic004G148200 Sobic004G148200 Sobic006G121500--Sobic004G148200 Sobic002G367400 Sobic002G367400 Sobic006G121500--Sobic002G367400 Sobic002G055700 Sobic002G055700 Sobic006G121500--Sobic002G055700 Sobic006G121500--Sobic010G069200 Sobic004G189500 Sobic004G189500 Sobic006G121500--Sobic004G189500 Sobic004G050000 Sobic004G050000 Sobic006G121500--Sobic004G050000 Sobic006G121500--Sobic006G240600 Sobic010G156400 Sobic010G156400 Sobic005G011900--Sobic010G156400 Sobic001G539300 Sobic001G539300 Sobic005G011900--Sobic001G539300 Sobic001G162233 Sobic001G162233 Sobic005G011900--Sobic001G162233 Sobic004G292600 Sobic004G292600 Sobic005G011900--Sobic004G292600
Octagon: transcription factors


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