Gene annotation
Transcriptome id Sobic.008G156500.1
Synonym Sb08g020530
Functional annotation ankyrin-1, putative, expressed
UniProt C5YRD7
Pfam PF07719 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF351
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10 KOG0508Ankyrin repeat protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os12g40770.1 : ankyrin-1, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT62622 , PNT62623 , PNT62621 , KQJ86511
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G138900 AAT1, putative, expressed -
2 Sobic.005G102300 dirigent, putative, expressed -
3 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.005G101900 O-methyltransferase, putative, expressed -
5 Sobic.006G010100 terpene synthase, putative, expressed -
6 Sobic.004G240100 phosphoenolpyruvate carboxylase kinase, putative, expressed -
7 Sobic.005G101600 dirigent, putative, expressed -
8 Sobic.010G072100 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
10 Sobic.009G144800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.005G101700 dirigent, putative, expressed -
12 Sobic.008G181100 - -
13 Sobic.009G196400 expressed protein -
14 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
15 Sobic.002G163100 expressed protein -
16 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.002G139300 AP2 domain containing protein, expressed -
19 Sobic.009G139600 - -
20 Sobic.002G092400 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2


Gene co-expression network
sample Sobic008G156500 Sobic008G156500 Sobic004G138900 Sobic004G138900 Sobic008G156500--Sobic004G138900 Sobic005G102300 Sobic005G102300 Sobic008G156500--Sobic005G102300 Sobic007G215600 Sobic007G215600 Sobic008G156500--Sobic007G215600 Sobic005G101900 Sobic005G101900 Sobic008G156500--Sobic005G101900 Sobic006G010100 Sobic006G010100 Sobic008G156500--Sobic006G010100 Sobic004G240100 Sobic004G240100 Sobic008G156500--Sobic004G240100 Sobic005G101600 Sobic005G101600 Sobic008G156500--Sobic005G101600 Sobic010G072100 Sobic010G072100 Sobic008G156500--Sobic010G072100 Sobic008G158100 Sobic008G158100 Sobic008G156500--Sobic008G158100 Sobic004G138900--Sobic005G102300 Sobic004G138900--Sobic005G101900 Sobic009G144800 Sobic009G144800 Sobic004G138900--Sobic009G144800 Sobic010G016850 Sobic010G016850 Sobic004G138900--Sobic010G016850 Sobic004G138900--Sobic008G156500 Sobic002G150866 Sobic002G150866 Sobic004G138900--Sobic002G150866 Sobic004G138900--Sobic006G010100 Sobic001G242000 Sobic001G242000 Sobic004G138900--Sobic001G242000 Sobic010G223800 Sobic010G223800 Sobic004G138900--Sobic010G223800 Sobic005G102300--Sobic004G138900 Sobic005G102300--Sobic005G101900 Sobic005G102300--Sobic009G144800 Sobic005G102300--Sobic006G010100 Sobic005G102300--Sobic008G156500 Sobic009G144900 Sobic009G144900 Sobic005G102300--Sobic009G144900 Sobic010G137366 Sobic010G137366 Sobic005G102300--Sobic010G137366 Sobic001G195300 Sobic001G195300 Sobic005G102300--Sobic001G195300 Sobic005G110454 Sobic005G110454 Sobic005G102300--Sobic005G110454 Sobic004G148100 Sobic004G148100 Sobic007G215600--Sobic004G148100 Sobic006G162100 Sobic006G162100 Sobic007G215600--Sobic006G162100 Sobic005G177600 Sobic005G177600 Sobic007G215600--Sobic005G177600 Sobic001G449100 Sobic001G449100 Sobic007G215600--Sobic001G449100 Sobic004G189500 Sobic004G189500 Sobic007G215600--Sobic004G189500 Sobic009G145600 Sobic009G145600 Sobic007G215600--Sobic009G145600 Sobic004G148200 Sobic004G148200 Sobic007G215600--Sobic004G148200 Sobic002G369400 Sobic002G369400 Sobic007G215600--Sobic002G369400 Sobic006G154500 Sobic006G154500 Sobic007G215600--Sobic006G154500 Sobic005G101900--Sobic005G102300 Sobic005G101900--Sobic009G144800 Sobic005G101900--Sobic004G138900 Sobic005G101900--Sobic002G369400 Sobic005G101900--Sobic009G144900 Sobic005G101900--Sobic006G010100 Sobic005G101900--Sobic001G242000 Sobic005G070200 Sobic005G070200 Sobic005G101900--Sobic005G070200 Sobic005G011900 Sobic005G011900 Sobic005G101900--Sobic005G011900 Sobic006G235000 Sobic006G235000 Sobic006G010100--Sobic006G235000 Sobic001G185450 Sobic001G185450 Sobic006G010100--Sobic001G185450 Sobic002G063800 Sobic002G063800 Sobic006G010100--Sobic002G063800 Sobic004G245700 Sobic004G245700 Sobic006G010100--Sobic004G245700 Sobic006G010100--Sobic009G145600 Sobic010G062300 Sobic010G062300 Sobic006G010100--Sobic010G062300 Sobic003G043500 Sobic003G043500 Sobic006G010100--Sobic003G043500 Sobic009G145500 Sobic009G145500 Sobic006G010100--Sobic009G145500 Sobic004G315200 Sobic004G315200 Sobic006G010100--Sobic004G315200 Sobic010G211600 Sobic010G211600 Sobic004G240100--Sobic010G211600 Sobic004G240600 Sobic004G240600 Sobic004G240100--Sobic004G240600 Sobic006G260300 Sobic006G260300 Sobic004G240100--Sobic006G260300 Sobic001G197000 Sobic001G197000 Sobic004G240100--Sobic001G197000 Sobic004G064900 Sobic004G064900 Sobic004G240100--Sobic004G064900 Sobic009G196400 Sobic009G196400 Sobic004G240100--Sobic009G196400 Sobic004G252100 Sobic004G252100 Sobic004G240100--Sobic004G252100 Sobic004G240100--Sobic008G156500 Sobic006G190700 Sobic006G190700 Sobic004G240100--Sobic006G190700 Sobic005G101700 Sobic005G101700 Sobic005G101600--Sobic005G101700 Sobic001G318600 Sobic001G318600 Sobic005G101600--Sobic001G318600 Sobic001G400800 Sobic001G400800 Sobic005G101600--Sobic001G400800 Sobic007G227300 Sobic007G227300 Sobic005G101600--Sobic007G227300 Sobic005G206601 Sobic005G206601 Sobic005G101600--Sobic005G206601 Sobic005G101800 Sobic005G101800 Sobic005G101600--Sobic005G101800 Sobic010G084400 Sobic010G084400 Sobic005G101600--Sobic010G084400 Sobic003G437100 Sobic003G437100 Sobic005G101600--Sobic003G437100 Sobic003G200700 Sobic003G200700 Sobic005G101600--Sobic003G200700 Sobic003G280100 Sobic003G280100 Sobic010G072100--Sobic003G280100 Sobic003G426000 Sobic003G426000 Sobic010G072100--Sobic003G426000 Sobic010G072100--Sobic003G437100 Sobic010G102200 Sobic010G102200 Sobic010G072100--Sobic010G102200 Sobic009G128700 Sobic009G128700 Sobic010G072100--Sobic009G128700 Sobic003G426300 Sobic003G426300 Sobic010G072100--Sobic003G426300 Sobic010G072100--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic010G072100--Sobic007G067600 Sobic010G072100--Sobic004G148200 Sobic008G027600 Sobic008G027600 Sobic008G158100--Sobic008G027600 Sobic008G158100--Sobic004G148200 Sobic002G139300 Sobic002G139300 Sobic008G158100--Sobic002G139300 Sobic003G417700 Sobic003G417700 Sobic008G158100--Sobic003G417700 Sobic001G187200 Sobic001G187200 Sobic008G158100--Sobic001G187200 Sobic005G011200 Sobic005G011200 Sobic008G158100--Sobic005G011200 Sobic006G268800 Sobic006G268800 Sobic008G158100--Sobic006G268800 Sobic008G158100--Sobic002G369400 Sobic008G158100--Sobic009G145500
Octagon: transcription factors


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