Gene annotation
Transcriptome id Sobic.004G240100.1,Sobic.004G240100.2
Synonym FU
Functional annotation phosphoenolpyruvate carboxylase kinase, putative, expressed
UniProt A0A194YRF8
Pfam PF00069
Panther DB PTHR11042 PTHR11042:SF98
NCBI CDD KOG1187; Serine/threonine protein kinase KOG1164Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G50240 : Protein kinase family protein with ARM repeat domain
RAP-DB (Rice) LOC_Os03g21770.1 : phosphoenolpyruvate carboxylase kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
2 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
3 Sobic.006G260300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@oryzain beta chain precursor, putative, expressed -
4 Sobic.001G197000 dehydration response related protein, putative, expressed -
5 Sobic.004G064900 gp176, putative, expressed -
6 Sobic.009G196400 expressed protein -
7 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
8 Sobic.008G156500 ankyrin-1, putative, expressed -
9 Sobic.006G190700 - -
10 Sobic.004G266200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
11 Sobic.003G289601 - -
12 Sobic.002G139300 AP2 domain containing protein, expressed -
13 Sobic.001G333400 SCP-like extracellular protein, expressed -
14 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
15 Sobic.003G174700 expressed protein -
16 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.004G217450 - -
20 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic004G240100 Sobic004G240100 Sobic010G211600 Sobic010G211600 Sobic004G240100--Sobic010G211600 Sobic004G240600 Sobic004G240600 Sobic004G240100--Sobic004G240600 Sobic006G260300 Sobic006G260300 Sobic004G240100--Sobic006G260300 Sobic001G197000 Sobic001G197000 Sobic004G240100--Sobic001G197000 Sobic004G064900 Sobic004G064900 Sobic004G240100--Sobic004G064900 Sobic009G196400 Sobic009G196400 Sobic004G240100--Sobic009G196400 Sobic004G252100 Sobic004G252100 Sobic004G240100--Sobic004G252100 Sobic008G156500 Sobic008G156500 Sobic004G240100--Sobic008G156500 Sobic006G190700 Sobic006G190700 Sobic004G240100--Sobic006G190700 Sobic002G004900 Sobic002G004900 Sobic010G211600--Sobic002G004900 Sobic003G280200 Sobic003G280200 Sobic010G211600--Sobic003G280200 Sobic008G027600 Sobic008G027600 Sobic010G211600--Sobic008G027600 Sobic008G158100 Sobic008G158100 Sobic010G211600--Sobic008G158100 Sobic008G172600 Sobic008G172600 Sobic010G211600--Sobic008G172600 Sobic005G177600 Sobic005G177600 Sobic010G211600--Sobic005G177600 Sobic003G417700 Sobic003G417700 Sobic010G211600--Sobic003G417700 Sobic001G318500 Sobic001G318500 Sobic010G211600--Sobic001G318500 Sobic002G139300 Sobic002G139300 Sobic010G211600--Sobic002G139300 Sobic004G240600--Sobic006G190700 Sobic004G333150 Sobic004G333150 Sobic004G240600--Sobic004G333150 Sobic004G240600--Sobic002G139300 Sobic004G240600--Sobic009G196400 Sobic010G052700 Sobic010G052700 Sobic004G240600--Sobic010G052700 Sobic001G333400 Sobic001G333400 Sobic004G240600--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic004G240600--Sobic005G011200 Sobic009G106800 Sobic009G106800 Sobic004G240600--Sobic009G106800 Sobic004G240600--Sobic008G158100 Sobic005G080900 Sobic005G080900 Sobic006G260300--Sobic005G080900 Sobic008G025600 Sobic008G025600 Sobic006G260300--Sobic008G025600 Sobic003G174700 Sobic003G174700 Sobic006G260300--Sobic003G174700 Sobic004G217450 Sobic004G217450 Sobic006G260300--Sobic004G217450 Sobic006G137800 Sobic006G137800 Sobic006G260300--Sobic006G137800 Sobic006G260300--Sobic004G064900 Sobic006G149200 Sobic006G149200 Sobic006G260300--Sobic006G149200 Sobic006G159600 Sobic006G159600 Sobic006G260300--Sobic006G159600 Sobic004G274900 Sobic004G274900 Sobic006G260300--Sobic004G274900 Sobic004G159400 Sobic004G159400 Sobic001G197000--Sobic004G159400 Sobic001G077000 Sobic001G077000 Sobic001G197000--Sobic001G077000 Sobic002G329900 Sobic002G329900 Sobic001G197000--Sobic002G329900 Sobic003G215700 Sobic003G215700 Sobic001G197000--Sobic003G215700 Sobic001G047800 Sobic001G047800 Sobic001G197000--Sobic001G047800 Sobic001G533400 Sobic001G533400 Sobic001G197000--Sobic001G533400 Sobic003G209000 Sobic003G209000 Sobic001G197000--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic001G197000--Sobic002G418400 Sobic010G031000 Sobic010G031000 Sobic001G197000--Sobic010G031000 Sobic001G070800 Sobic001G070800 Sobic004G064900--Sobic001G070800 Sobic004G189500 Sobic004G189500 Sobic004G064900--Sobic004G189500 Sobic004G064900--Sobic006G159600 Sobic003G088400 Sobic003G088400 Sobic004G064900--Sobic003G088400 Sobic002G348100 Sobic002G348100 Sobic004G064900--Sobic002G348100 Sobic007G061300 Sobic007G061300 Sobic004G064900--Sobic007G061300 Sobic002G199650 Sobic002G199650 Sobic004G064900--Sobic002G199650 Sobic001G339700 Sobic001G339700 Sobic004G064900--Sobic001G339700 Sobic001G331200 Sobic001G331200 Sobic004G064900--Sobic001G331200 Sobic001G444400 Sobic001G444400 Sobic009G196400--Sobic001G444400 Sobic009G196400--Sobic002G139300 Sobic006G153100 Sobic006G153100 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic009G196400--Sobic001G333400 Sobic009G196400--Sobic009G106800 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic007G141500 Sobic007G141500 Sobic009G196400--Sobic007G141500 Sobic001G016500 Sobic001G016500 Sobic004G252100--Sobic001G016500 Sobic005G019700 Sobic005G019700 Sobic004G252100--Sobic005G019700 Sobic006G116700 Sobic006G116700 Sobic004G252100--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic004G252100--Sobic001G018900 Sobic007G019000 Sobic007G019000 Sobic004G252100--Sobic007G019000 Sobic007G190800 Sobic007G190800 Sobic004G252100--Sobic007G190800 Sobic001G533500 Sobic001G533500 Sobic004G252100--Sobic001G533500 Sobic009G050300 Sobic009G050300 Sobic004G252100--Sobic009G050300 Sobic007G197800 Sobic007G197800 Sobic004G252100--Sobic007G197800 Sobic004G138900 Sobic004G138900 Sobic008G156500--Sobic004G138900 Sobic005G102300 Sobic005G102300 Sobic008G156500--Sobic005G102300 Sobic007G215600 Sobic007G215600 Sobic008G156500--Sobic007G215600 Sobic005G101900 Sobic005G101900 Sobic008G156500--Sobic005G101900 Sobic006G010100 Sobic006G010100 Sobic008G156500--Sobic006G010100 Sobic008G156500--Sobic004G240100 Sobic005G101600 Sobic005G101600 Sobic008G156500--Sobic005G101600 Sobic010G072100 Sobic010G072100 Sobic008G156500--Sobic010G072100 Sobic008G156500--Sobic008G158100 Sobic006G190700--Sobic004G240600 Sobic006G190700--Sobic002G139300 Sobic006G190700--Sobic010G052700 Sobic006G214600 Sobic006G214600 Sobic006G190700--Sobic006G214600 Sobic006G190700--Sobic004G333150 Sobic006G190700--Sobic001G333400 Sobic006G190700--Sobic005G011200 Sobic006G190700--Sobic003G280200 Sobic006G190700--Sobic008G158100
Octagon: transcription factors


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