Gene annotation
Transcriptome id Sobic.009G071100.2
Synonym
Functional annotation acid phosphatase, putative, expressed
UniProt A0A1Z5R217
Pfam PF03767
Panther DB PTHR31284 PTHR31284:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003993; acid phosphatase activity


Orthologs (automatic annotation)
TAIR AT5G51260 : HAD superfamily, subfamily IIIB acid phosphatase
RAP-DB (Rice) LOC_Os05g10310.1 : acid phosphatase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07139
Barley HORVU7Hr1G010680.3 , HORVU7Hr1G010680.1
Wheat TraesCS4B02G363900 , TraesCS4A02G431300 , TraesCS4B02G363800 , TraesCS4A02G431200 , TraesCS5A02G532300 , TraesCS5A02G532200 , TraesCS7A02G040400 , TraesCSU02G209300 , TraesCS5A02G532400 , TraesCS4B02G364000 , TraesCS4B02G364100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G071000 HAD superfamily phosphatase, putative, expressed -
2 Sobic.006G268500 transporter family protein, putative, expressed -
3 Sobic.004G138900 AAT1, putative, expressed -
4 Sobic.002G010900 expressed protein -
5 Sobic.002G422300 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
6 Sobic.008G140900 expressed protein -
7 Sobic.002G150866 - -
8 Sobic.005G110451 - -
9 Sobic.005G110454 - -
10 Sobic.010G016850 - -
11 Sobic.007G003900 cytochrome P450, putative, expressed -
12 Sobic.001G449100 E2F-related protein, putative, expressed -
13 Sobic.002G369600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 3-O-glucosyltransferase, putative, expressed -
14 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.009G021900 - -
16 Sobic.004G148100 Cupin domain containing protein, expressed -
17 Sobic.005G011900 - -
18 Sobic.002G040900 VQ domain containing protein, putative, expressed -
19 Sobic.009G197400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (Zm)(PubMedID : 27208977)@O-methyltransferase family protein("PubMedID : 26759170,PubMedID : 24597475")@O-methyltransferase, putative, expressed -
20 Sobic.001G162233 - -


Gene co-expression network
sample Sobic009G071100 Sobic009G071100 Sobic009G071000 Sobic009G071000 Sobic009G071100--Sobic009G071000 Sobic006G268500 Sobic006G268500 Sobic009G071100--Sobic006G268500 Sobic004G138900 Sobic004G138900 Sobic009G071100--Sobic004G138900 Sobic002G010900 Sobic002G010900 Sobic009G071100--Sobic002G010900 Sobic002G422300 Sobic002G422300 Sobic009G071100--Sobic002G422300 Sobic008G140900 Sobic008G140900 Sobic009G071100--Sobic008G140900 Sobic002G150866 Sobic002G150866 Sobic009G071100--Sobic002G150866 Sobic005G110451 Sobic005G110451 Sobic009G071100--Sobic005G110451 Sobic005G110454 Sobic005G110454 Sobic009G071100--Sobic005G110454 Sobic009G071000--Sobic006G268500 Sobic009G071000--Sobic008G140900 Sobic009G071000--Sobic002G422300 Sobic009G071000--Sobic002G010900 Sobic006G227750 Sobic006G227750 Sobic009G071000--Sobic006G227750 Sobic009G157450 Sobic009G157450 Sobic009G071000--Sobic009G157450 Sobic008G158332 Sobic008G158332 Sobic009G071000--Sobic008G158332 Sobic009G071000--Sobic009G071100 Sobic006G234900 Sobic006G234900 Sobic009G071000--Sobic006G234900 Sobic006G268500--Sobic009G071000 Sobic006G268500--Sobic008G140900 Sobic006G268500--Sobic009G157450 Sobic006G268500--Sobic006G227750 Sobic006G268500--Sobic008G158332 Sobic006G268500--Sobic002G422300 Sobic006G268500--Sobic002G010900 Sobic006G268500--Sobic006G234900 Sobic006G026500 Sobic006G026500 Sobic006G268500--Sobic006G026500 Sobic005G102300 Sobic005G102300 Sobic004G138900--Sobic005G102300 Sobic005G101900 Sobic005G101900 Sobic004G138900--Sobic005G101900 Sobic009G144800 Sobic009G144800 Sobic004G138900--Sobic009G144800 Sobic010G016850 Sobic010G016850 Sobic004G138900--Sobic010G016850 Sobic008G156500 Sobic008G156500 Sobic004G138900--Sobic008G156500 Sobic004G138900--Sobic002G150866 Sobic006G010100 Sobic006G010100 Sobic004G138900--Sobic006G010100 Sobic001G242000 Sobic001G242000 Sobic004G138900--Sobic001G242000 Sobic010G223800 Sobic010G223800 Sobic004G138900--Sobic010G223800 Sobic001G114900 Sobic001G114900 Sobic002G010900--Sobic001G114900 Sobic002G010900--Sobic005G110454 Sobic002G010900--Sobic002G422300 Sobic002G010900--Sobic005G110451 Sobic008G022000 Sobic008G022000 Sobic002G010900--Sobic008G022000 Sobic006G101300 Sobic006G101300 Sobic002G010900--Sobic006G101300 Sobic005G177600 Sobic005G177600 Sobic002G010900--Sobic005G177600 Sobic002G010900--Sobic009G071000 Sobic002G010900--Sobic008G158332 Sobic010G043900 Sobic010G043900 Sobic002G422300--Sobic010G043900 Sobic002G422300--Sobic008G158332 Sobic002G422300--Sobic002G010900 Sobic002G422300--Sobic001G114900 Sobic002G422300--Sobic006G268500 Sobic002G422300--Sobic009G071000 Sobic008G027600 Sobic008G027600 Sobic002G422300--Sobic008G027600 Sobic002G422300--Sobic006G101300 Sobic003G026400 Sobic003G026400 Sobic002G422300--Sobic003G026400 Sobic008G140900--Sobic006G268500 Sobic008G140900--Sobic009G157450 Sobic008G140900--Sobic009G071000 Sobic008G140900--Sobic008G158332 Sobic008G140900--Sobic006G227750 Sobic008G140900--Sobic002G422300 Sobic001G162233 Sobic001G162233 Sobic008G140900--Sobic001G162233 Sobic008G140900--Sobic006G026500 Sobic008G140900--Sobic002G010900 Sobic002G150866--Sobic004G138900 Sobic002G150866--Sobic009G071100 Sobic005G215500 Sobic005G215500 Sobic002G150866--Sobic005G215500 Sobic007G003900 Sobic007G003900 Sobic002G150866--Sobic007G003900 Sobic002G150866--Sobic005G102300 Sobic002G023200 Sobic002G023200 Sobic002G150866--Sobic002G023200 Sobic001G449100 Sobic001G449100 Sobic002G150866--Sobic001G449100 Sobic002G150866--Sobic010G223800 Sobic007G215600 Sobic007G215600 Sobic002G150866--Sobic007G215600 Sobic005G110451--Sobic005G110454 Sobic001G195300 Sobic001G195300 Sobic005G110451--Sobic001G195300 Sobic005G110451--Sobic002G010900 Sobic001G401000 Sobic001G401000 Sobic005G110451--Sobic001G401000 Sobic005G110451--Sobic001G114900 Sobic005G224000 Sobic005G224000 Sobic005G110451--Sobic005G224000 Sobic010G211600 Sobic010G211600 Sobic005G110451--Sobic010G211600 Sobic005G110451--Sobic009G144800 Sobic005G110451--Sobic008G158332 Sobic005G110454--Sobic005G110451 Sobic005G110454--Sobic001G195300 Sobic005G110454--Sobic002G010900 Sobic005G110454--Sobic001G401000 Sobic005G110454--Sobic001G114900 Sobic005G110454--Sobic005G224000 Sobic005G110454--Sobic009G144800 Sobic005G110454--Sobic010G211600 Sobic005G110454--Sobic008G158332
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.