Gene annotation
Transcriptome id Sobic.001G377100.1,Sobic.001G377100.4,Sobic.001G377100.3,Sobic.001G377100.2
Synonym Sb01g035790
Functional annotation OsFBX426 - F-box domain containing protein, expressed
UniProt A0A1Z5S9K3 , A0A1B6QNA6 , C6JSC7 , A0A1Z5S9L2 , A0A1Z5S9M7
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03970 : F-box associated ubiquitination effector family protein
RAP-DB (Rice) LOC_Os07g02910.1 : OsFBL33 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G421300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@encoding a transcription factor with the ALOG domain(PubMedID : 34271177)@"DAI encodes the ALOG family protein, and inhibits awn elongation by suppressing both cell proliferation and elongation."(PubMedID : 35640621)@DUF640 domain containing protein, putative, expressed -
2 Sobic.008G161100 - -
3 Sobic.003G295500 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.007G217900 expressed protein -
5 Sobic.007G151250 - -
6 Sobic.005G041150 - -
7 Sobic.008G108100 - -
8 Sobic.010G127901 - -
9 Sobic.009G091940 - -
10 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
11 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
12 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
13 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
14 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
15 Sobic.006G099400 - -
16 Sobic.003G267150 - -
17 Sobic.004G262550 - -
18 Sobic.003G389150 - -
19 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
20 Sobic.004G313000 leucine rich repeat containing protein, expressed -


Gene co-expression network
sample Sobic001G377100 Sobic001G377100 Sobic003G421300 Sobic003G421300 Sobic001G377100--Sobic003G421300 Sobic008G161100 Sobic008G161100 Sobic001G377100--Sobic008G161100 Sobic003G295500 Sobic003G295500 Sobic001G377100--Sobic003G295500 Sobic007G217900 Sobic007G217900 Sobic001G377100--Sobic007G217900 Sobic007G151250 Sobic007G151250 Sobic001G377100--Sobic007G151250 Sobic005G041150 Sobic005G041150 Sobic001G377100--Sobic005G041150 Sobic008G108100 Sobic008G108100 Sobic001G377100--Sobic008G108100 Sobic010G127901 Sobic010G127901 Sobic001G377100--Sobic010G127901 Sobic009G091940 Sobic009G091940 Sobic001G377100--Sobic009G091940 Sobic007G001700 Sobic007G001700 Sobic003G421300--Sobic007G001700 Sobic006G192900 Sobic006G192900 Sobic003G421300--Sobic006G192900 Sobic003G421300--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic003G421300--Sobic004G173300 Sobic002G307500 Sobic002G307500 Sobic003G421300--Sobic002G307500 Sobic010G002600 Sobic010G002600 Sobic003G421300--Sobic010G002600 Sobic003G421300--Sobic001G377100 Sobic003G421300--Sobic010G127901 Sobic004G181400 Sobic004G181400 Sobic003G421300--Sobic004G181400 Sobic001G152600 Sobic001G152600 Sobic008G161100--Sobic001G152600 Sobic001G137400 Sobic001G137400 Sobic008G161100--Sobic001G137400 Sobic007G193300 Sobic007G193300 Sobic008G161100--Sobic007G193300 Sobic005G166100 Sobic005G166100 Sobic008G161100--Sobic005G166100 Sobic001G137500 Sobic001G137500 Sobic008G161100--Sobic001G137500 Sobic005G164800 Sobic005G164800 Sobic008G161100--Sobic005G164800 Sobic001G288000 Sobic001G288000 Sobic008G161100--Sobic001G288000 Sobic002G259301 Sobic002G259301 Sobic008G161100--Sobic002G259301 Sobic001G457600 Sobic001G457600 Sobic008G161100--Sobic001G457600 Sobic003G295500--Sobic007G217900 Sobic001G265000 Sobic001G265000 Sobic003G295500--Sobic001G265000 Sobic009G236150 Sobic009G236150 Sobic003G295500--Sobic009G236150 Sobic003G295500--Sobic007G151250 Sobic003G295500--Sobic008G108100 Sobic002G160500 Sobic002G160500 Sobic003G295500--Sobic002G160500 Sobic007G217900--Sobic003G295500 Sobic007G217900--Sobic008G108100 Sobic007G217900--Sobic009G236150 Sobic007G217900--Sobic002G160500 Sobic004G262550 Sobic004G262550 Sobic007G217900--Sobic004G262550 Sobic003G261766 Sobic003G261766 Sobic007G151250--Sobic003G261766 Sobic005G165300 Sobic005G165300 Sobic007G151250--Sobic005G165300 Sobic009G115800 Sobic009G115800 Sobic007G151250--Sobic009G115800 Sobic007G151250--Sobic005G041150 Sobic006G083050 Sobic006G083050 Sobic007G151250--Sobic006G083050 Sobic005G216833 Sobic005G216833 Sobic007G151250--Sobic005G216833 Sobic006G135550 Sobic006G135550 Sobic007G151250--Sobic006G135550 Sobic007G151250--Sobic009G236150 Sobic007G151250--Sobic008G108100 Sobic005G041150--Sobic009G115800 Sobic005G041150--Sobic003G261766 Sobic009G134700 Sobic009G134700 Sobic005G041150--Sobic009G134700 Sobic006G099400 Sobic006G099400 Sobic005G041150--Sobic006G099400 Sobic006G159500 Sobic006G159500 Sobic005G041150--Sobic006G159500 Sobic005G116800 Sobic005G116800 Sobic005G041150--Sobic005G116800 Sobic005G041150--Sobic006G083050 Sobic005G041150--Sobic008G108100 Sobic005G041150--Sobic006G135550 Sobic003G267150 Sobic003G267150 Sobic008G108100--Sobic003G267150 Sobic008G108100--Sobic009G115800 Sobic008G108100--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic008G108100--Sobic004G313000 Sobic008G108100--Sobic004G262550 Sobic010G127901--Sobic006G083050 Sobic003G270650 Sobic003G270650 Sobic010G127901--Sobic003G270650 Sobic001G065150 Sobic001G065150 Sobic010G127901--Sobic001G065150 Sobic010G127901--Sobic005G116800 Sobic010G127901--Sobic007G151250 Sobic009G025750 Sobic009G025750 Sobic010G127901--Sobic009G025750 Sobic010G229025 Sobic010G229025 Sobic010G127901--Sobic010G229025 Sobic009G045400 Sobic009G045400 Sobic010G127901--Sobic009G045400 Sobic010G127901--Sobic005G165300 Sobic009G091940--Sobic002G160500 Sobic009G091940--Sobic003G267150 Sobic009G091940--Sobic004G262550 Sobic003G389150 Sobic003G389150 Sobic009G091940--Sobic003G389150 Sobic009G091940--Sobic004G313000
Octagon: transcription factors


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