Gene annotation
Transcriptome id Sobic.003G421300.1
Synonym LSH4, Sb03g045430, DAI,awn1;DOMINANT AWN INHIBITOR
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
encoding a transcription factor with the ALOG domain (PubMedID : 34271177)
"DAI encodes the ALOG family protein, and inhibits awn elongation by suppressing both cell proliferation and elongation." (PubMedID : 35640621)
DUF640 domain containing protein, putative, expressed
UniProt A0A1B6Q842
Pfam PF04852
Panther DB PTHR31165
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07090 : Protein of unknown function (DUF640)
RAP-DB (Rice) LOC_Os06g46030.1 : DUF640 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a021109 , Zm00025a019050 , Zm00025a041930 , Zm00025a006596 , Zm00025a039740 , Zm00025a037663 , Zm00025a032852 , Zm00025a056514 , Zm00025a043957 , Zm00025a044984 , Zm00025a027009 , Zm00025a037773 , Zm00025a010702 , Zm00025a051795
Brachypodium KQK10399 , KQK00399 , KQK17088 , KQK17087 , KQK10400 , KQJ83599 , KQJ93496 , KQK21000 , KQJ97098 , KQK00400 , KQK06795
Barley HORVU3Hr1G088000.1 , HORVU3Hr1G088000.3 , HORVU3Hr1G088000.2 , HORVU3Hr1G088000.5 , HORVU3Hr1G088000.4 , HORVU3Hr1G088000.7 , HORVU3Hr1G088000.6 , HORVU3Hr1G088000.8 , HORVU1Hr1G041240.2 , HORVU1Hr1G041240.1 , HORVU1Hr1G041240.6 , HORVU1Hr1G041240.7 , HORVU1Hr1G041240.4 , HORVU1Hr1G041240.5 , HORVU7Hr1G106960.7 , HORVU7Hr1G106960.6 , HORVU7Hr1G106960.5 , HORVU7Hr1G106960.4 , HORVU7Hr1G106960.3 , HORVU7Hr1G106960.2 , HORVU1Hr1G060250.1 , HORVU6Hr1G058340.2 , HORVU6Hr1G058340.3 , HORVU2Hr1G060890.5 , HORVU2Hr1G060890.4 , HORVU2Hr1G060890.7 , HORVU2Hr1G060890.6 , HORVU2Hr1G060890.3 , HORVU2Hr1G060890.2 , HORVU2Hr1G060890.8
Wheat TraesCS1B02G235800 , TraesCS1A02G154900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G001700 ATOFP18/OFP18, putative, expressed -
2 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.008G108100 - -
4 Sobic.004G173300 expressed protein -
5 Sobic.002G307500 MATH domain containing protein, expressed -
6 Sobic.010G002600 methyltransferase, putative, expressed -
7 Sobic.001G377100 OsFBX426 - F-box domain containing protein, expressed -
8 Sobic.010G127901 - -
9 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
10 Sobic.002G268600 PCF-like (ClassI) Subclade 7 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
11 Sobic.001G014600 - -
12 Sobic.004G093800 integral membrane protein, putative, expressed -
13 Sobic.001G479900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
14 Sobic.006G009200 expressed protein -
15 Sobic.010G241400 expressed protein -
16 Sobic.008G142500 Leucine Rich Repeat family protein, expressed -
17 Sobic.009G035000 expressed protein -
18 Sobic.001G451150 - -
19 Sobic.004G176550 - -
20 Sobic.005G041150 - -


Gene co-expression network
sample Sobic003G421300 Sobic003G421300 Sobic007G001700 Sobic007G001700 Sobic003G421300--Sobic007G001700 Sobic006G192900 Sobic006G192900 Sobic003G421300--Sobic006G192900 Sobic008G108100 Sobic008G108100 Sobic003G421300--Sobic008G108100 Sobic004G173300 Sobic004G173300 Sobic003G421300--Sobic004G173300 Sobic002G307500 Sobic002G307500 Sobic003G421300--Sobic002G307500 Sobic010G002600 Sobic010G002600 Sobic003G421300--Sobic010G002600 Sobic001G377100 Sobic001G377100 Sobic003G421300--Sobic001G377100 Sobic010G127901 Sobic010G127901 Sobic003G421300--Sobic010G127901 Sobic004G181400 Sobic004G181400 Sobic003G421300--Sobic004G181400 Sobic007G001700--Sobic006G192900 Sobic007G001700--Sobic004G173300 Sobic004G093800 Sobic004G093800 Sobic007G001700--Sobic004G093800 Sobic007G001700--Sobic002G307500 Sobic006G089266 Sobic006G089266 Sobic007G001700--Sobic006G089266 Sobic007G001700--Sobic010G002600 Sobic006G009200 Sobic006G009200 Sobic007G001700--Sobic006G009200 Sobic009G253900 Sobic009G253900 Sobic007G001700--Sobic009G253900 Sobic007G001700--Sobic004G181400 Sobic010G241400 Sobic010G241400 Sobic006G192900--Sobic010G241400 Sobic006G192900--Sobic010G002600 Sobic006G192900--Sobic002G307500 Sobic009G035000 Sobic009G035000 Sobic006G192900--Sobic009G035000 Sobic006G192900--Sobic006G009200 Sobic008G041500 Sobic008G041500 Sobic006G192900--Sobic008G041500 Sobic006G192900--Sobic004G181400 Sobic006G192900--Sobic004G093800 Sobic002G062400 Sobic002G062400 Sobic006G192900--Sobic002G062400 Sobic003G267150 Sobic003G267150 Sobic008G108100--Sobic003G267150 Sobic009G115800 Sobic009G115800 Sobic008G108100--Sobic009G115800 Sobic002G160500 Sobic002G160500 Sobic008G108100--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic008G108100--Sobic004G313000 Sobic004G262550 Sobic004G262550 Sobic008G108100--Sobic004G262550 Sobic004G173300--Sobic004G093800 Sobic004G173300--Sobic010G002600 Sobic005G131500 Sobic005G131500 Sobic004G173300--Sobic005G131500 Sobic004G173300--Sobic002G307500 Sobic004G173300--Sobic006G089266 Sobic004G173300--Sobic006G192900 Sobic004G173300--Sobic004G181400 Sobic004G173300--Sobic009G253900 Sobic008G142500 Sobic008G142500 Sobic004G173300--Sobic008G142500 Sobic002G307500--Sobic004G093800 Sobic002G307500--Sobic006G192900 Sobic001G489400 Sobic001G489400 Sobic002G307500--Sobic001G489400 Sobic010G229025 Sobic010G229025 Sobic002G307500--Sobic010G229025 Sobic009G199401 Sobic009G199401 Sobic002G307500--Sobic009G199401 Sobic006G235801 Sobic006G235801 Sobic002G307500--Sobic006G235801 Sobic006G221500 Sobic006G221500 Sobic002G307500--Sobic006G221500 Sobic002G307500--Sobic010G002600 Sobic006G136300 Sobic006G136300 Sobic002G307500--Sobic006G136300 Sobic010G002600--Sobic008G041500 Sobic010G002600--Sobic009G035000 Sobic006G193801 Sobic006G193801 Sobic010G002600--Sobic006G193801 Sobic010G002600--Sobic006G192900 Sobic003G282400 Sobic003G282400 Sobic010G002600--Sobic003G282400 Sobic010G002600--Sobic004G181400 Sobic002G319900 Sobic002G319900 Sobic010G002600--Sobic002G319900 Sobic003G185000 Sobic003G185000 Sobic010G002600--Sobic003G185000 Sobic001G163500 Sobic001G163500 Sobic010G002600--Sobic001G163500 Sobic001G377100--Sobic003G421300 Sobic008G161100 Sobic008G161100 Sobic001G377100--Sobic008G161100 Sobic003G295500 Sobic003G295500 Sobic001G377100--Sobic003G295500 Sobic007G217900 Sobic007G217900 Sobic001G377100--Sobic007G217900 Sobic007G151250 Sobic007G151250 Sobic001G377100--Sobic007G151250 Sobic005G041150 Sobic005G041150 Sobic001G377100--Sobic005G041150 Sobic001G377100--Sobic008G108100 Sobic001G377100--Sobic010G127901 Sobic009G091940 Sobic009G091940 Sobic001G377100--Sobic009G091940 Sobic006G083050 Sobic006G083050 Sobic010G127901--Sobic006G083050 Sobic003G270650 Sobic003G270650 Sobic010G127901--Sobic003G270650 Sobic001G065150 Sobic001G065150 Sobic010G127901--Sobic001G065150 Sobic005G116800 Sobic005G116800 Sobic010G127901--Sobic005G116800 Sobic010G127901--Sobic007G151250 Sobic009G025750 Sobic009G025750 Sobic010G127901--Sobic009G025750 Sobic010G127901--Sobic010G229025 Sobic009G045400 Sobic009G045400 Sobic010G127901--Sobic009G045400 Sobic005G165300 Sobic005G165300 Sobic010G127901--Sobic005G165300 Sobic004G181400--Sobic010G002600 Sobic004G181400--Sobic006G192900 Sobic004G181400--Sobic008G041500 Sobic004G181400--Sobic002G319900 Sobic004G181400--Sobic009G035000 Sobic004G181400--Sobic003G267150 Sobic004G149150 Sobic004G149150 Sobic004G181400--Sobic004G149150 Sobic004G181400--Sobic008G108100 Sobic004G181400--Sobic004G173300
Octagon: transcription factors


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