Gene annotation
Transcriptome id Sobic.002G268600.1
Synonym Sb02g030260, TCP-like gene;SbTCP6;SbTCP6
Functional annotation PCF-like (ClassI) Subclade 7 TCP (PubMedID : 21444336)
"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
TCP family transcription factor, putative, expressed
UniProt C5X621
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45680 : TCP family transcription factor
RAP-DB (Rice) LOC_Os08g43160.1 : TCP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a014378 , Zm00025a005363 , Zm00025a051123
Brachypodium KQJ91115
Barley HORVU5Hr1G080210.2 , HORVU5Hr1G080210.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G134150 - -
2 Sobic.005G218300 - -
3 Sobic.006G192900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
4 Sobic.010G241400 expressed protein -
5 Sobic.010G054700 - -
6 Sobic.003G018150 - -
7 Sobic.009G136950 - -
8 Sobic.004G163350 - -
9 Sobic.001G213832 - -
10 Sobic.004G347000 - -
11 Sobic.002G307500 MATH domain containing protein, expressed -
12 Sobic.001G245650 - -
13 Sobic.007G126150 - -
14 Sobic.004G111200 receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.004G181400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed K16286: E3 ubiquitin-protein ligase EL5
16 Sobic.004G320900 - -
17 Sobic.010G002600 methyltransferase, putative, expressed -
18 Sobic.004G173300 expressed protein -
19 Sobic.006G193801 - -
20 Sobic.006G235801 - -


Gene co-expression network
sample Sobic002G268600 Sobic002G268600 Sobic001G134150 Sobic001G134150 Sobic002G268600--Sobic001G134150 Sobic005G218300 Sobic005G218300 Sobic002G268600--Sobic005G218300 Sobic006G192900 Sobic006G192900 Sobic002G268600--Sobic006G192900 Sobic010G241400 Sobic010G241400 Sobic002G268600--Sobic010G241400 Sobic010G054700 Sobic010G054700 Sobic002G268600--Sobic010G054700 Sobic003G018150 Sobic003G018150 Sobic002G268600--Sobic003G018150 Sobic009G136950 Sobic009G136950 Sobic002G268600--Sobic009G136950 Sobic004G163350 Sobic004G163350 Sobic002G268600--Sobic004G163350 Sobic001G213832 Sobic001G213832 Sobic002G268600--Sobic001G213832 Sobic001G134150--Sobic002G268600 Sobic001G489550 Sobic001G489550 Sobic001G134150--Sobic001G489550 Sobic001G134150--Sobic010G241400 Sobic007G126150 Sobic007G126150 Sobic001G134150--Sobic007G126150 Sobic007G207100 Sobic007G207100 Sobic001G134150--Sobic007G207100 Sobic004G320900 Sobic004G320900 Sobic001G134150--Sobic004G320900 Sobic010G008433 Sobic010G008433 Sobic001G134150--Sobic010G008433 Sobic010G222050 Sobic010G222050 Sobic001G134150--Sobic010G222050 Sobic001G134150--Sobic006G192900 Sobic009G253900 Sobic009G253900 Sobic005G218300--Sobic009G253900 Sobic005G218300--Sobic010G054700 Sobic005G218300--Sobic009G136950 Sobic004G347000 Sobic004G347000 Sobic005G218300--Sobic004G347000 Sobic005G218300--Sobic002G268600 Sobic005G218300--Sobic001G213832 Sobic002G307500 Sobic002G307500 Sobic005G218300--Sobic002G307500 Sobic001G245650 Sobic001G245650 Sobic005G218300--Sobic001G245650 Sobic006G089266 Sobic006G089266 Sobic005G218300--Sobic006G089266 Sobic006G192900--Sobic010G241400 Sobic010G002600 Sobic010G002600 Sobic006G192900--Sobic010G002600 Sobic006G192900--Sobic002G307500 Sobic009G035000 Sobic009G035000 Sobic006G192900--Sobic009G035000 Sobic006G009200 Sobic006G009200 Sobic006G192900--Sobic006G009200 Sobic008G041500 Sobic008G041500 Sobic006G192900--Sobic008G041500 Sobic004G181400 Sobic004G181400 Sobic006G192900--Sobic004G181400 Sobic004G093800 Sobic004G093800 Sobic006G192900--Sobic004G093800 Sobic002G062400 Sobic002G062400 Sobic006G192900--Sobic002G062400 Sobic010G241400--Sobic006G192900 Sobic010G241400--Sobic006G009200 Sobic010G241400--Sobic002G062400 Sobic005G168900 Sobic005G168900 Sobic010G241400--Sobic005G168900 Sobic001G217850 Sobic001G217850 Sobic010G241400--Sobic001G217850 Sobic004G176550 Sobic004G176550 Sobic010G241400--Sobic004G176550 Sobic010G241400--Sobic009G035000 Sobic009G170050 Sobic009G170050 Sobic010G241400--Sobic009G170050 Sobic010G241400--Sobic001G134150 Sobic010G054700--Sobic009G136950 Sobic010G054700--Sobic001G213832 Sobic004G111200 Sobic004G111200 Sobic010G054700--Sobic004G111200 Sobic010G054700--Sobic005G218300 Sobic010G054700--Sobic003G018150 Sobic006G045601 Sobic006G045601 Sobic010G054700--Sobic006G045601 Sobic010G054700--Sobic004G347000 Sobic006G235801 Sobic006G235801 Sobic010G054700--Sobic006G235801 Sobic010G195000 Sobic010G195000 Sobic010G054700--Sobic010G195000 Sobic003G018150--Sobic006G235801 Sobic010G100600 Sobic010G100600 Sobic003G018150--Sobic010G100600 Sobic001G278900 Sobic001G278900 Sobic003G018150--Sobic001G278900 Sobic001G471050 Sobic001G471050 Sobic003G018150--Sobic001G471050 Sobic003G018150--Sobic010G054700 Sobic003G018150--Sobic004G111200 Sobic006G097600 Sobic006G097600 Sobic003G018150--Sobic006G097600 Sobic004G150300 Sobic004G150300 Sobic003G018150--Sobic004G150300 Sobic002G204050 Sobic002G204050 Sobic003G018150--Sobic002G204050 Sobic009G136950--Sobic001G213832 Sobic009G136950--Sobic010G054700 Sobic009G136950--Sobic001G245650 Sobic009G136950--Sobic004G320900 Sobic009G136950--Sobic005G218300 Sobic007G141900 Sobic007G141900 Sobic009G136950--Sobic007G141900 Sobic002G012100 Sobic002G012100 Sobic009G136950--Sobic002G012100 Sobic010G196466 Sobic010G196466 Sobic009G136950--Sobic010G196466 Sobic001G494200 Sobic001G494200 Sobic009G136950--Sobic001G494200 Sobic004G163350--Sobic003G018150 Sobic009G223400 Sobic009G223400 Sobic004G163350--Sobic009G223400 Sobic004G163350--Sobic010G054700 Sobic004G163350--Sobic006G235801 Sobic004G163350--Sobic002G268600 Sobic004G163350--Sobic009G136950 Sobic004G163350--Sobic001G213832 Sobic009G235400 Sobic009G235400 Sobic004G163350--Sobic009G235400 Sobic004G163350--Sobic006G045601 Sobic001G213832--Sobic009G136950 Sobic001G213832--Sobic010G054700 Sobic009G102250 Sobic009G102250 Sobic001G213832--Sobic009G102250 Sobic001G213832--Sobic002G012100 Sobic001G213832--Sobic004G111200 Sobic003G023450 Sobic003G023450 Sobic001G213832--Sobic003G023450 Sobic001G213832--Sobic001G494200 Sobic001G213832--Sobic010G196466 Sobic004G242800 Sobic004G242800 Sobic001G213832--Sobic004G242800
Octagon: transcription factors


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