Gene annotation
Transcriptome id Sobic.001G384500.1
Synonym Sb01g036470
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt A0A1B6QNE9
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF22
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G79620 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os03g21230.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029688 , Zm00025a012726 , Zm00025a051047 , Zm00025a004542 , Zm00025a025630 , Zm00025a002306 , Zm00025a044046 , Zm00025a042309 , Zm00025a025101 , Zm00025a000606
Brachypodium KQJ85665 , PNT67767 , KQK21860 , KQK05701
Barley HORVU4Hr1G051120.11 , HORVU4Hr1G051120.35 , HORVU4Hr1G051120.36 , HORVU4Hr1G051120.39 , HORVU4Hr1G051120.38 , HORVU4Hr1G051120.28 , HORVU4Hr1G051120.29 , HORVU4Hr1G051120.22 , HORVU4Hr1G051120.23 , HORVU4Hr1G051120.21 , HORVU4Hr1G051120.27 , HORVU4Hr1G051120.24 , HORVU4Hr1G051120.25 , HORVU4Hr1G051120.40 , HORVU4Hr1G051120.41 , HORVU4Hr1G051120.42 , HORVU4Hr1G051120.43 , HORVU4Hr1G051120.3 , HORVU4Hr1G051120.1 , HORVU4Hr1G051120.7 , HORVU4Hr1G051120.4 , HORVU4Hr1G051120.9 , HORVU4Hr1G051120.34 , HORVU4Hr1G051120.37 , HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1 , HORVU4Hr1G051120.13 , HORVU4Hr1G051120.12 , HORVU4Hr1G051120.17 , HORVU4Hr1G051120.16 , HORVU4Hr1G051120.15 , HORVU4Hr1G051120.19 , HORVU3Hr1G007590.2 , HORVU3Hr1G007590.1 , HORVU3Hr1G007590.6 , HORVU4Hr1G051120.31 , HORVU4Hr1G051120.30
Wheat TraesCS3B02G110500 , TraesCS5D02G524800 , TraesCS3B02G371700 , TraesCS4D02G175200 , TraesCS4D02G175200 , TraesCS4A02G131500 , TraesCS4A02G347600 , TraesCS3D02G333600 , TraesCS4B02G173100 , TraesCS4B02G173100 , TraesCS4A02G391200 , TraesCS5B02G412400 , TraesCS5B02G526000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
2 Sobic.001G004300 expressed protein -
3 Sobic.009G082200 TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G147200 - -
5 Sobic.008G074500 Probable leucine-rich repeat receptor-like protein kinase At5g49770(PubMedID : 31721651)@leucine-rich repeat family protein, putative, expressed -
6 Sobic.004G088100 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
7 Sobic.006G173700 copper-transporting ATPase 3, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
8 Sobic.007G179750 - -
9 Sobic.008G125600 - -
10 Sobic.008G068601 - -
11 Sobic.005G046500 protein kinase family protein, putative, expressed -
12 Sobic.001G291200 - -
13 Sobic.001G162200 expressed protein -
14 Sobic.006G279800 expressed protein -
15 Sobic.006G053700 ACT domain containing protein, expressed -
16 Sobic.005G096000 resistance protein, putative, expressed -
17 Sobic.006G214400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
18 Sobic.003G049500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter family protein, putative, expressed -
19 Sobic.003G159450 - -
20 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein


Gene co-expression network
sample Sobic001G384500 Sobic001G384500 Sobic001G240800 Sobic001G240800 Sobic001G384500--Sobic001G240800 Sobic001G004300 Sobic001G004300 Sobic001G384500--Sobic001G004300 Sobic009G082200 Sobic009G082200 Sobic001G384500--Sobic009G082200 Sobic004G147200 Sobic004G147200 Sobic001G384500--Sobic004G147200 Sobic008G074500 Sobic008G074500 Sobic001G384500--Sobic008G074500 Sobic004G088100 Sobic004G088100 Sobic001G384500--Sobic004G088100 Sobic006G173700 Sobic006G173700 Sobic001G384500--Sobic006G173700 Sobic007G179750 Sobic007G179750 Sobic001G384500--Sobic007G179750 Sobic008G125600 Sobic008G125600 Sobic001G384500--Sobic008G125600 Sobic004G096100 Sobic004G096100 Sobic001G240800--Sobic004G096100 Sobic010G241300 Sobic010G241300 Sobic001G240800--Sobic010G241300 Sobic005G072200 Sobic005G072200 Sobic001G240800--Sobic005G072200 Sobic001G291200 Sobic001G291200 Sobic001G240800--Sobic001G291200 Sobic004G227300 Sobic004G227300 Sobic001G240800--Sobic004G227300 Sobic001G240800--Sobic004G088100 Sobic001G240800--Sobic007G179750 Sobic006G102400 Sobic006G102400 Sobic001G240800--Sobic006G102400 Sobic003G264901 Sobic003G264901 Sobic001G240800--Sobic003G264901 Sobic001G004300--Sobic001G384500 Sobic001G004300--Sobic001G240800 Sobic002G301600 Sobic002G301600 Sobic001G004300--Sobic002G301600 Sobic002G418200 Sobic002G418200 Sobic001G004300--Sobic002G418200 Sobic009G209200 Sobic009G209200 Sobic001G004300--Sobic009G209200 Sobic007G130100 Sobic007G130100 Sobic001G004300--Sobic007G130100 Sobic010G214600 Sobic010G214600 Sobic001G004300--Sobic010G214600 Sobic008G186400 Sobic008G186400 Sobic001G004300--Sobic008G186400 Sobic006G107832 Sobic006G107832 Sobic001G004300--Sobic006G107832 Sobic009G082200--Sobic004G088100 Sobic002G040800 Sobic002G040800 Sobic009G082200--Sobic002G040800 Sobic009G154600 Sobic009G154600 Sobic009G082200--Sobic009G154600 Sobic005G008001 Sobic005G008001 Sobic009G082200--Sobic005G008001 Sobic009G082200--Sobic008G125600 Sobic001G377000 Sobic001G377000 Sobic009G082200--Sobic001G377000 Sobic002G273700 Sobic002G273700 Sobic009G082200--Sobic002G273700 Sobic001G031300 Sobic001G031300 Sobic009G082200--Sobic001G031300 Sobic003G222300 Sobic003G222300 Sobic009G082200--Sobic003G222300 Sobic006G214400 Sobic006G214400 Sobic004G147200--Sobic006G214400 Sobic003G170200 Sobic003G170200 Sobic004G147200--Sobic003G170200 Sobic010G052500 Sobic010G052500 Sobic004G147200--Sobic010G052500 Sobic004G147200--Sobic003G222300 Sobic010G258300 Sobic010G258300 Sobic004G147200--Sobic010G258300 Sobic007G205600 Sobic007G205600 Sobic004G147200--Sobic007G205600 Sobic004G147200--Sobic001G031300 Sobic002G114700 Sobic002G114700 Sobic004G147200--Sobic002G114700 Sobic003G368800 Sobic003G368800 Sobic004G147200--Sobic003G368800 Sobic001G162200 Sobic001G162200 Sobic008G074500--Sobic001G162200 Sobic009G038200 Sobic009G038200 Sobic008G074500--Sobic009G038200 Sobic003G237000 Sobic003G237000 Sobic008G074500--Sobic003G237000 Sobic002G209100 Sobic002G209100 Sobic008G074500--Sobic002G209100 Sobic009G233900 Sobic009G233900 Sobic008G074500--Sobic009G233900 Sobic001G321600 Sobic001G321600 Sobic008G074500--Sobic001G321600 Sobic005G093400 Sobic005G093400 Sobic008G074500--Sobic005G093400 Sobic004G197800 Sobic004G197800 Sobic008G074500--Sobic004G197800 Sobic009G153200 Sobic009G153200 Sobic008G074500--Sobic009G153200 Sobic004G088100--Sobic009G082200 Sobic004G088100--Sobic008G125600 Sobic003G386600 Sobic003G386600 Sobic004G088100--Sobic003G386600 Sobic004G088100--Sobic001G240800 Sobic005G222900 Sobic005G222900 Sobic004G088100--Sobic005G222900 Sobic004G088100--Sobic003G264901 Sobic007G054100 Sobic007G054100 Sobic004G088100--Sobic007G054100 Sobic004G088100--Sobic003G368800 Sobic001G429300 Sobic001G429300 Sobic004G088100--Sobic001G429300 Sobic006G000700 Sobic006G000700 Sobic006G173700--Sobic006G000700 Sobic010G123400 Sobic010G123400 Sobic006G173700--Sobic010G123400 Sobic005G224700 Sobic005G224700 Sobic006G173700--Sobic005G224700 Sobic009G103600 Sobic009G103600 Sobic006G173700--Sobic009G103600 Sobic008G193300 Sobic008G193300 Sobic006G173700--Sobic008G193300 Sobic006G173700--Sobic001G384500 Sobic004G253100 Sobic004G253100 Sobic006G173700--Sobic004G253100 Sobic006G173700--Sobic004G147200 Sobic003G196900 Sobic003G196900 Sobic006G173700--Sobic003G196900 Sobic001G093600 Sobic001G093600 Sobic007G179750--Sobic001G093600 Sobic006G273000 Sobic006G273000 Sobic007G179750--Sobic006G273000 Sobic003G107300 Sobic003G107300 Sobic007G179750--Sobic003G107300 Sobic007G014600 Sobic007G014600 Sobic007G179750--Sobic007G014600 Sobic001G005500 Sobic001G005500 Sobic007G179750--Sobic001G005500 Sobic008G101500 Sobic008G101500 Sobic007G179750--Sobic008G101500 Sobic010G246600 Sobic010G246600 Sobic007G179750--Sobic010G246600 Sobic007G191900 Sobic007G191900 Sobic007G179750--Sobic007G191900 Sobic008G152200 Sobic008G152200 Sobic007G179750--Sobic008G152200 Sobic008G125501 Sobic008G125501 Sobic008G125600--Sobic008G125501 Sobic008G000900 Sobic008G000900 Sobic008G125600--Sobic008G000900 Sobic003G159450 Sobic003G159450 Sobic008G125600--Sobic003G159450 Sobic001G111900 Sobic001G111900 Sobic008G125600--Sobic001G111900 Sobic003G088700 Sobic003G088700 Sobic008G125600--Sobic003G088700 Sobic007G112900 Sobic007G112900 Sobic008G125600--Sobic007G112900 Sobic004G062800 Sobic004G062800 Sobic008G125600--Sobic004G062800 Sobic010G056000 Sobic010G056000 Sobic008G125600--Sobic010G056000 Sobic001G454401 Sobic001G454401 Sobic008G125600--Sobic001G454401
Octagon: transcription factors


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