Gene annotation
Transcriptome id Sobic.001G388800.4,Sobic.001G388800.2,Sobic.001G388800.3,Sobic.001G388800.1
Synonym Sb01g036850, emb2191
Functional annotation tRNA-specific adenosine deaminase 2, putative, expressed
UniProt A0A1Z5SAB7 , C5X1S7 , A0A1Z5S9R9
Pfam PF00383
Panther DB PTHR11079 PTHR11079:SF92
NCBI CDD KOG1018; Cytosine deaminase FCY1 and related enzymes
KEGG Orthology K15441; TAD2, tRNA-specific adenosine deaminase 2
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G48175 : Cytidine/deoxycytidylate deaminase family protein
RAP-DB (Rice) LOC_Os03g20570.1 : tRNA-specific adenosine deaminase 2, putative, expressed
MaizeGDB (Corn) Zm00025a007744
Brachypodium PNT77507
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265066 - -
2 Sobic.010G217001 - -
3 Sobic.001G202550 - -
4 Sobic.009G212500 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.004G306700 peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed K05864: PPID, peptidyl-prolyl isomerase D
6 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
7 Sobic.001G047500 - -
8 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.007G124800 MLA1, putative, expressed -
10 Sobic.001G316500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.008G143901 - -
12 Sobic.008G086300 - -
13 Sobic.001G483001 - -
14 Sobic.001G519200 expressed protein -
15 Sobic.008G007100 lectin-like receptor kinase 7, putative, expressed -
16 Sobic.001G212800 prefoldin, putative, expressed K04797: pfdA, prefoldin alpha subunit
17 Sobic.001G424066 - -
18 Sobic.001G507700 - -
19 Sobic.002G208900 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.006G000200 - -


Gene co-expression network
sample Sobic001G388800 Sobic001G388800 Sobic004G265066 Sobic004G265066 Sobic001G388800--Sobic004G265066 Sobic010G217001 Sobic010G217001 Sobic001G388800--Sobic010G217001 Sobic001G202550 Sobic001G202550 Sobic001G388800--Sobic001G202550 Sobic009G212500 Sobic009G212500 Sobic001G388800--Sobic009G212500 Sobic004G306700 Sobic004G306700 Sobic001G388800--Sobic004G306700 Sobic006G243000 Sobic006G243000 Sobic001G388800--Sobic006G243000 Sobic001G047500 Sobic001G047500 Sobic001G388800--Sobic001G047500 Sobic004G091300 Sobic004G091300 Sobic001G388800--Sobic004G091300 Sobic007G124800 Sobic007G124800 Sobic001G388800--Sobic007G124800 Sobic004G265066--Sobic001G388800 Sobic004G265066--Sobic010G217001 Sobic004G265066--Sobic007G124800 Sobic002G018133 Sobic002G018133 Sobic004G265066--Sobic002G018133 Sobic004G045700 Sobic004G045700 Sobic004G265066--Sobic004G045700 Sobic008G007200 Sobic008G007200 Sobic004G265066--Sobic008G007200 Sobic004G265066--Sobic004G306700 Sobic002G030001 Sobic002G030001 Sobic004G265066--Sobic002G030001 Sobic008G086300 Sobic008G086300 Sobic004G265066--Sobic008G086300 Sobic010G217001--Sobic002G018133 Sobic007G081400 Sobic007G081400 Sobic010G217001--Sobic007G081400 Sobic002G231400 Sobic002G231400 Sobic010G217001--Sobic002G231400 Sobic010G217001--Sobic002G030001 Sobic005G083866 Sobic005G083866 Sobic010G217001--Sobic005G083866 Sobic004G288900 Sobic004G288900 Sobic010G217001--Sobic004G288900 Sobic003G043650 Sobic003G043650 Sobic010G217001--Sobic003G043650 Sobic002G138200 Sobic002G138200 Sobic010G217001--Sobic002G138200 Sobic001G316500 Sobic001G316500 Sobic010G217001--Sobic001G316500 Sobic004G008100 Sobic004G008100 Sobic001G202550--Sobic004G008100 Sobic006G000200 Sobic006G000200 Sobic001G202550--Sobic006G000200 Sobic001G202550--Sobic001G047500 Sobic005G031400 Sobic005G031400 Sobic001G202550--Sobic005G031400 Sobic004G030850 Sobic004G030850 Sobic001G202550--Sobic004G030850 Sobic007G075600 Sobic007G075600 Sobic001G202550--Sobic007G075600 Sobic010G088100 Sobic010G088100 Sobic001G202550--Sobic010G088100 Sobic003G358800 Sobic003G358800 Sobic001G202550--Sobic003G358800 Sobic002G302800 Sobic002G302800 Sobic001G202550--Sobic002G302800 Sobic006G280250 Sobic006G280250 Sobic009G212500--Sobic006G280250 Sobic003G433000 Sobic003G433000 Sobic009G212500--Sobic003G433000 Sobic009G212500--Sobic001G202550 Sobic002G208900 Sobic002G208900 Sobic009G212500--Sobic002G208900 Sobic009G212500--Sobic004G306700 Sobic009G212500--Sobic001G388800 Sobic009G212500--Sobic004G091300 Sobic008G075500 Sobic008G075500 Sobic009G212500--Sobic008G075500 Sobic009G199401 Sobic009G199401 Sobic009G212500--Sobic009G199401 Sobic001G507700 Sobic001G507700 Sobic004G306700--Sobic001G507700 Sobic004G306700--Sobic001G316500 Sobic001G312801 Sobic001G312801 Sobic004G306700--Sobic001G312801 Sobic009G252600 Sobic009G252600 Sobic004G306700--Sobic009G252600 Sobic001G027400 Sobic001G027400 Sobic004G306700--Sobic001G027400 Sobic002G387000 Sobic002G387000 Sobic004G306700--Sobic002G387000 Sobic004G306700--Sobic010G217001 Sobic008G007100 Sobic008G007100 Sobic004G306700--Sobic008G007100 Sobic004G306700--Sobic007G124800 Sobic008G143901 Sobic008G143901 Sobic006G243000--Sobic008G143901 Sobic001G096200 Sobic001G096200 Sobic006G243000--Sobic001G096200 Sobic006G213350 Sobic006G213350 Sobic006G243000--Sobic006G213350 Sobic002G395900 Sobic002G395900 Sobic006G243000--Sobic002G395900 Sobic001G483001 Sobic001G483001 Sobic006G243000--Sobic001G483001 Sobic001G520000 Sobic001G520000 Sobic006G243000--Sobic001G520000 Sobic004G026000 Sobic004G026000 Sobic006G243000--Sobic004G026000 Sobic009G045100 Sobic009G045100 Sobic006G243000--Sobic009G045100 Sobic001G018550 Sobic001G018550 Sobic006G243000--Sobic001G018550 Sobic001G047500--Sobic001G202550 Sobic001G047500--Sobic004G008100 Sobic001G047500--Sobic007G124800 Sobic003G253900 Sobic003G253900 Sobic001G047500--Sobic003G253900 Sobic001G047500--Sobic001G316500 Sobic008G151900 Sobic008G151900 Sobic001G047500--Sobic008G151900 Sobic001G047500--Sobic006G000200 Sobic001G047500--Sobic004G306700 Sobic001G047500--Sobic001G388800 Sobic002G321700 Sobic002G321700 Sobic004G091300--Sobic002G321700 Sobic002G197400 Sobic002G197400 Sobic004G091300--Sobic002G197400 Sobic010G042300 Sobic010G042300 Sobic004G091300--Sobic010G042300 Sobic006G279100 Sobic006G279100 Sobic004G091300--Sobic006G279100 Sobic008G160100 Sobic008G160100 Sobic004G091300--Sobic008G160100 Sobic004G091300--Sobic006G280250 Sobic004G091300--Sobic001G483001 Sobic001G093732 Sobic001G093732 Sobic004G091300--Sobic001G093732 Sobic004G091300--Sobic008G075500 Sobic001G174300 Sobic001G174300 Sobic007G124800--Sobic001G174300 Sobic007G124800--Sobic001G316500 Sobic008G108000 Sobic008G108000 Sobic007G124800--Sobic008G108000 Sobic007G124800--Sobic010G217001 Sobic007G124800--Sobic004G045700 Sobic007G124800--Sobic008G086300 Sobic007G124800--Sobic001G027400 Sobic007G124800--Sobic008G007200 Sobic002G202200 Sobic002G202200 Sobic007G124800--Sobic002G202200
Octagon: transcription factors


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