Gene annotation
Transcriptome id Sobic.001G212800.1
Synonym Sb01g018810, PFD5
Functional annotation prefoldin, putative, expressed
UniProt C5WXH7
Pfam PF02996
Panther DB PTHR12674 PTHR12674:SF2
NCBI CDD KOG3048; Molecular chaperone Prefoldin, subunit 5
KEGG Orthology K04797; pfdA, prefoldin alpha subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23290 : prefoldin 5
RAP-DB (Rice) LOC_Os10g34670.1 : prefoldin, putative, expressed
MaizeGDB (Corn) Zm00025a006543
Brachypodium KQJ97204
Barley -
Wheat TraesCS1B02G179100 , TraesCS1A02G163200
Populus -


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cDNA sequences
Sobic.001G212800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G507700 - -
2 Sobic.004G306700 peptidyl-prolyl cis-trans isomerase CYP40, putative, expressed K05864: PPID, peptidyl-prolyl isomerase D
3 Sobic.001G140101 - -
4 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
5 Sobic.002G399000 expressed protein -
6 Sobic.002G197400 expressed protein -
7 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
8 Sobic.008G007100 lectin-like receptor kinase 7, putative, expressed -
9 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
10 Sobic.001G388800 tRNA-specific adenosine deaminase 2, putative, expressed K15441: TAD2, tRNA-specific adenosine deaminase 2
11 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
12 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
13 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
14 Sobic.003G251900 expressed protein -
15 Sobic.004G350600 AMP-binding domain containing protein, expressed -
16 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
17 Sobic.009G211600 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
18 Sobic.001G027400 - -
19 Sobic.009G149600 transmembrane protein 18, putative, expressed -
20 Sobic.008G160100 - -


Gene co-expression network
sample Sobic001G212800 Sobic001G212800 Sobic001G507700 Sobic001G507700 Sobic001G212800--Sobic001G507700 Sobic004G306700 Sobic004G306700 Sobic001G212800--Sobic004G306700 Sobic001G140101 Sobic001G140101 Sobic001G212800--Sobic001G140101 Sobic001G096200 Sobic001G096200 Sobic001G212800--Sobic001G096200 Sobic002G399000 Sobic002G399000 Sobic001G212800--Sobic002G399000 Sobic002G197400 Sobic002G197400 Sobic001G212800--Sobic002G197400 Sobic009G252600 Sobic009G252600 Sobic001G212800--Sobic009G252600 Sobic008G007100 Sobic008G007100 Sobic001G212800--Sobic008G007100 Sobic001G212900 Sobic001G212900 Sobic001G212800--Sobic001G212900 Sobic001G507700--Sobic004G306700 Sobic006G082100 Sobic006G082100 Sobic001G507700--Sobic006G082100 Sobic002G387000 Sobic002G387000 Sobic001G507700--Sobic002G387000 Sobic001G507700--Sobic001G212800 Sobic009G064832 Sobic009G064832 Sobic001G507700--Sobic009G064832 Sobic009G211600 Sobic009G211600 Sobic001G507700--Sobic009G211600 Sobic007G189900 Sobic007G189900 Sobic001G507700--Sobic007G189900 Sobic010G105900 Sobic010G105900 Sobic001G507700--Sobic010G105900 Sobic001G507700--Sobic001G096200 Sobic004G306700--Sobic001G507700 Sobic001G316500 Sobic001G316500 Sobic004G306700--Sobic001G316500 Sobic001G312801 Sobic001G312801 Sobic004G306700--Sobic001G312801 Sobic004G306700--Sobic009G252600 Sobic001G027400 Sobic001G027400 Sobic004G306700--Sobic001G027400 Sobic004G306700--Sobic002G387000 Sobic010G217001 Sobic010G217001 Sobic004G306700--Sobic010G217001 Sobic004G306700--Sobic008G007100 Sobic007G124800 Sobic007G124800 Sobic004G306700--Sobic007G124800 Sobic004G350600 Sobic004G350600 Sobic001G140101--Sobic004G350600 Sobic005G063600 Sobic005G063600 Sobic001G140101--Sobic005G063600 Sobic001G140101--Sobic002G399000 Sobic009G223900 Sobic009G223900 Sobic001G140101--Sobic009G223900 Sobic008G151900 Sobic008G151900 Sobic001G140101--Sobic008G151900 Sobic003G155800 Sobic003G155800 Sobic001G140101--Sobic003G155800 Sobic009G149600 Sobic009G149600 Sobic001G140101--Sobic009G149600 Sobic006G169600 Sobic006G169600 Sobic001G140101--Sobic006G169600 Sobic001G028500 Sobic001G028500 Sobic001G140101--Sobic001G028500 Sobic004G310400 Sobic004G310400 Sobic001G096200--Sobic004G310400 Sobic004G026000 Sobic004G026000 Sobic001G096200--Sobic004G026000 Sobic001G520000 Sobic001G520000 Sobic001G096200--Sobic001G520000 Sobic004G314100 Sobic004G314100 Sobic001G096200--Sobic004G314100 Sobic001G096200--Sobic003G155800 Sobic006G243000 Sobic006G243000 Sobic001G096200--Sobic006G243000 Sobic003G118500 Sobic003G118500 Sobic001G096200--Sobic003G118500 Sobic003G253700 Sobic003G253700 Sobic001G096200--Sobic003G253700 Sobic004G231501 Sobic004G231501 Sobic001G096200--Sobic004G231501 Sobic001G350300 Sobic001G350300 Sobic002G399000--Sobic001G350300 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic006G170800 Sobic006G170800 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic002G399000--Sobic003G118500 Sobic005G025400 Sobic005G025400 Sobic002G399000--Sobic005G025400 Sobic004G091300 Sobic004G091300 Sobic002G197400--Sobic004G091300 Sobic008G160100 Sobic008G160100 Sobic002G197400--Sobic008G160100 Sobic002G110600 Sobic002G110600 Sobic002G197400--Sobic002G110600 Sobic008G016800 Sobic008G016800 Sobic002G197400--Sobic008G016800 Sobic002G197400--Sobic004G310400 Sobic002G197400--Sobic001G096200 Sobic002G197400--Sobic004G026000 Sobic002G197400--Sobic002G399000 Sobic002G197400--Sobic003G118500 Sobic003G251900 Sobic003G251900 Sobic009G252600--Sobic003G251900 Sobic009G252600--Sobic003G155800 Sobic001G093732 Sobic001G093732 Sobic009G252600--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic009G252600--Sobic002G206900 Sobic009G252600--Sobic001G520000 Sobic001G483001 Sobic001G483001 Sobic009G252600--Sobic001G483001 Sobic009G252600--Sobic003G253700 Sobic010G261500 Sobic010G261500 Sobic009G252600--Sobic010G261500 Sobic006G157450 Sobic006G157450 Sobic009G252600--Sobic006G157450 Sobic008G007200 Sobic008G007200 Sobic008G007100--Sobic008G007200 Sobic006G111400 Sobic006G111400 Sobic008G007100--Sobic006G111400 Sobic003G005332 Sobic003G005332 Sobic008G007100--Sobic003G005332 Sobic008G007100--Sobic001G027400 Sobic003G304900 Sobic003G304900 Sobic008G007100--Sobic003G304900 Sobic009G199900 Sobic009G199900 Sobic008G007100--Sobic009G199900 Sobic003G259000 Sobic003G259000 Sobic008G007100--Sobic003G259000 Sobic008G007100--Sobic003G251900 Sobic008G007100--Sobic006G169600 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic006G249600 Sobic006G249600 Sobic001G212900--Sobic006G249600 Sobic002G187900 Sobic002G187900 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic004G173200 Sobic004G173200 Sobic001G212900--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic001G212900--Sobic010G012200
Octagon: transcription factors


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