Gene annotation
Transcriptome id Sobic.001G426500.1
Synonym Sb01g040080
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
membrane protein, putative, expressed
UniProt A0A1B6QP64
Pfam PF06127
Panther DB PTHR34205 PTHR34205:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09085 : Protein of unknown function (DUF962)
RAP-DB (Rice) LOC_Os03g15910.1 : membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a001745
Brachypodium KQK22426
Barley HORVU4Hr1G060880.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G088600 - -
2 Sobic.003G331800 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.009G041200 expressed protein -
4 Sobic.005G116250 - -
5 Sobic.004G196600 expressed protein -
6 Sobic.001G185100 expressed protein -
7 Sobic.001G079401 - -
8 Sobic.001G396050 - -
9 Sobic.002G028000 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G124100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.009G013600 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
12 Sobic.001G413850 - -
13 Sobic.008G043000 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
14 Sobic.003G255000 no apical meristem protein, putative, expressed -
15 Sobic.003G029350 - -
16 Sobic.007G084800 expressed protein -
17 Sobic.003G000500 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
18 Sobic.002G029200 - -
19 Sobic.005G002350 - -
20 Sobic.003G099232 - -


Gene co-expression network
sample Sobic001G426500 Sobic001G426500 Sobic005G088600 Sobic005G088600 Sobic001G426500--Sobic005G088600 Sobic003G331800 Sobic003G331800 Sobic001G426500--Sobic003G331800 Sobic009G041200 Sobic009G041200 Sobic001G426500--Sobic009G041200 Sobic005G116250 Sobic005G116250 Sobic001G426500--Sobic005G116250 Sobic004G196600 Sobic004G196600 Sobic001G426500--Sobic004G196600 Sobic001G185100 Sobic001G185100 Sobic001G426500--Sobic001G185100 Sobic001G079401 Sobic001G079401 Sobic001G426500--Sobic001G079401 Sobic001G396050 Sobic001G396050 Sobic001G426500--Sobic001G396050 Sobic002G028000 Sobic002G028000 Sobic001G426500--Sobic002G028000 Sobic005G088600--Sobic005G116250 Sobic005G088600--Sobic009G041200 Sobic005G088600--Sobic004G196600 Sobic001G413850 Sobic001G413850 Sobic005G088600--Sobic001G413850 Sobic005G088600--Sobic001G396050 Sobic007G084800 Sobic007G084800 Sobic005G088600--Sobic007G084800 Sobic005G088600--Sobic002G028000 Sobic008G161601 Sobic008G161601 Sobic005G088600--Sobic008G161601 Sobic008G181050 Sobic008G181050 Sobic005G088600--Sobic008G181050 Sobic003G331800--Sobic005G116250 Sobic003G331800--Sobic005G088600 Sobic003G331800--Sobic004G196600 Sobic003G331800--Sobic002G028000 Sobic003G255000 Sobic003G255000 Sobic003G331800--Sobic003G255000 Sobic003G331800--Sobic001G396050 Sobic003G331800--Sobic009G041200 Sobic003G331800--Sobic001G185100 Sobic005G002350 Sobic005G002350 Sobic003G331800--Sobic005G002350 Sobic009G041200--Sobic007G084800 Sobic009G041200--Sobic001G413850 Sobic009G041200--Sobic005G088600 Sobic009G041100 Sobic009G041100 Sobic009G041200--Sobic009G041100 Sobic008G186700 Sobic008G186700 Sobic009G041200--Sobic008G186700 Sobic005G087666 Sobic005G087666 Sobic009G041200--Sobic005G087666 Sobic009G041200--Sobic008G161601 Sobic010G237100 Sobic010G237100 Sobic009G041200--Sobic010G237100 Sobic002G370300 Sobic002G370300 Sobic009G041200--Sobic002G370300 Sobic005G116250--Sobic004G196600 Sobic005G116250--Sobic005G088600 Sobic005G116250--Sobic002G028000 Sobic005G116250--Sobic001G185100 Sobic005G116250--Sobic001G396050 Sobic005G116250--Sobic009G041200 Sobic005G116250--Sobic008G181050 Sobic005G116250--Sobic003G255000 Sobic002G170740 Sobic002G170740 Sobic005G116250--Sobic002G170740 Sobic004G196600--Sobic005G116250 Sobic004G196600--Sobic002G028000 Sobic004G196600--Sobic001G185100 Sobic004G196600--Sobic005G088600 Sobic008G043800 Sobic008G043800 Sobic004G196600--Sobic008G043800 Sobic004G196600--Sobic001G396050 Sobic004G196600--Sobic002G170740 Sobic004G058800 Sobic004G058800 Sobic004G196600--Sobic004G058800 Sobic010G133100 Sobic010G133100 Sobic004G196600--Sobic010G133100 Sobic001G185100--Sobic004G196600 Sobic001G185100--Sobic005G116250 Sobic001G185100--Sobic002G028000 Sobic001G185100--Sobic001G396050 Sobic001G185100--Sobic008G043800 Sobic001G185100--Sobic005G088600 Sobic001G185100--Sobic010G133100 Sobic003G029350 Sobic003G029350 Sobic001G185100--Sobic003G029350 Sobic001G185100--Sobic003G255000 Sobic009G134832 Sobic009G134832 Sobic001G079401--Sobic009G134832 Sobic003G289200 Sobic003G289200 Sobic001G079401--Sobic003G289200 Sobic005G110466 Sobic005G110466 Sobic001G079401--Sobic005G110466 Sobic001G488000 Sobic001G488000 Sobic001G079401--Sobic001G488000 Sobic003G062200 Sobic003G062200 Sobic001G079401--Sobic003G062200 Sobic003G316350 Sobic003G316350 Sobic001G079401--Sobic003G316350 Sobic001G079401--Sobic001G426500 Sobic003G295000 Sobic003G295000 Sobic001G079401--Sobic003G295000 Sobic004G114200 Sobic004G114200 Sobic001G079401--Sobic004G114200 Sobic001G396050--Sobic005G116250 Sobic001G396050--Sobic004G196600 Sobic001G396050--Sobic001G185100 Sobic001G396050--Sobic005G088600 Sobic001G396050--Sobic002G028000 Sobic001G396050--Sobic003G255000 Sobic001G396050--Sobic005G002350 Sobic002G392550 Sobic002G392550 Sobic001G396050--Sobic002G392550 Sobic001G396050--Sobic010G133100 Sobic002G028000--Sobic004G196600 Sobic002G028000--Sobic005G116250 Sobic002G028000--Sobic008G181050 Sobic002G028000--Sobic001G185100 Sobic002G028000--Sobic002G170740 Sobic002G028000--Sobic008G043800 Sobic005G215100 Sobic005G215100 Sobic002G028000--Sobic005G215100 Sobic002G028000--Sobic010G133100 Sobic002G028000--Sobic001G396050
Octagon: transcription factors


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