Gene annotation
Transcriptome id Sobic.001G517400.1
Synonym Sb01g048250
Functional annotation expressed protein
UniProt A0A1Z5SBL1
Pfam -
Panther DB PTHR33127 PTHR33127:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g56710.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G044500 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed -
2 Sobic.003G085400 BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
3 Sobic.010G181150 - -
4 Sobic.004G290900 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
5 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
6 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
7 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
8 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G332966 - -
10 Sobic.006G160500 aspartyl protease family protein, putative, expressed -
11 Sobic.005G083733 - -
12 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
13 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
14 Sobic.009G033200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.003G006866 - -
16 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
17 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
18 Sobic.008G032000 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
19 Sobic.005G130800 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.008G124100 - -


Gene co-expression network
sample Sobic001G517400 Sobic001G517400 Sobic007G044500 Sobic007G044500 Sobic001G517400--Sobic007G044500 Sobic003G085400 Sobic003G085400 Sobic001G517400--Sobic003G085400 Sobic010G181150 Sobic010G181150 Sobic001G517400--Sobic010G181150 Sobic004G290900 Sobic004G290900 Sobic001G517400--Sobic004G290900 Sobic007G144400 Sobic007G144400 Sobic001G517400--Sobic007G144400 Sobic001G277000 Sobic001G277000 Sobic001G517400--Sobic001G277000 Sobic001G332966 Sobic001G332966 Sobic001G517400--Sobic001G332966 Sobic007G044500--Sobic007G144400 Sobic005G083733 Sobic005G083733 Sobic007G044500--Sobic005G083733 Sobic003G400266 Sobic003G400266 Sobic007G044500--Sobic003G400266 Sobic007G044500--Sobic001G517400 Sobic002G051300 Sobic002G051300 Sobic007G044500--Sobic002G051300 Sobic003G148700 Sobic003G148700 Sobic007G044500--Sobic003G148700 Sobic007G044500--Sobic001G277000 Sobic005G141000 Sobic005G141000 Sobic003G085400--Sobic005G141000 Sobic008G130700 Sobic008G130700 Sobic003G085400--Sobic008G130700 Sobic003G095000 Sobic003G095000 Sobic003G085400--Sobic003G095000 Sobic003G085400--Sobic001G517400 Sobic006G060700 Sobic006G060700 Sobic003G085400--Sobic006G060700 Sobic007G090415 Sobic007G090415 Sobic003G085400--Sobic007G090415 Sobic002G190100 Sobic002G190100 Sobic003G085400--Sobic002G190100 Sobic003G236300 Sobic003G236300 Sobic003G085400--Sobic003G236300 Sobic006G263800 Sobic006G263800 Sobic003G085400--Sobic006G263800 Sobic001G015300 Sobic001G015300 Sobic010G181150--Sobic001G015300 Sobic010G181150--Sobic005G083733 Sobic008G124100 Sobic008G124100 Sobic010G181150--Sobic008G124100 Sobic010G181150--Sobic001G277000 Sobic010G181150--Sobic001G517400 Sobic010G181150--Sobic003G085400 Sobic010G181150--Sobic007G044500 Sobic010G270900 Sobic010G270900 Sobic010G181150--Sobic010G270900 Sobic009G064766 Sobic009G064766 Sobic010G181150--Sobic009G064766 Sobic004G290900--Sobic001G517400 Sobic007G060900 Sobic007G060900 Sobic004G290900--Sobic007G060900 Sobic004G290900--Sobic001G277000 Sobic006G160500 Sobic006G160500 Sobic004G290900--Sobic006G160500 Sobic002G213800 Sobic002G213800 Sobic004G290900--Sobic002G213800 Sobic004G290900--Sobic003G085400 Sobic006G279800 Sobic006G279800 Sobic004G290900--Sobic006G279800 Sobic010G161600 Sobic010G161600 Sobic004G290900--Sobic010G161600 Sobic002G172600 Sobic002G172600 Sobic004G290900--Sobic002G172600 Sobic007G144400--Sobic007G144400 Sobic007G144400--Sobic007G044500 Sobic007G144400--Sobic005G083733 Sobic007G144400--Sobic003G400266 Sobic007G144400--Sobic003G148700 Sobic007G144400--Sobic002G051300 Sobic007G144400--Sobic001G277000 Sobic007G144400--Sobic001G015300 Sobic001G277000--Sobic008G124100 Sobic007G189800 Sobic007G189800 Sobic001G277000--Sobic007G189800 Sobic001G277000--Sobic009G064766 Sobic004G345900 Sobic004G345900 Sobic001G277000--Sobic004G345900 Sobic009G078500 Sobic009G078500 Sobic001G277000--Sobic009G078500 Sobic001G277000--Sobic002G213800 Sobic004G199600 Sobic004G199600 Sobic001G277000--Sobic004G199600 Sobic005G085200 Sobic005G085200 Sobic001G277000--Sobic005G085200 Sobic010G146200 Sobic010G146200 Sobic001G277000--Sobic010G146200 Sobic002G278800 Sobic002G278800 Sobic001G332966--Sobic002G278800 Sobic001G338000 Sobic001G338000 Sobic001G332966--Sobic001G338000 Sobic003G006866 Sobic003G006866 Sobic001G332966--Sobic003G006866 Sobic003G173700 Sobic003G173700 Sobic001G332966--Sobic003G173700 Sobic002G278700 Sobic002G278700 Sobic001G332966--Sobic002G278700 Sobic003G131800 Sobic003G131800 Sobic001G332966--Sobic003G131800 Sobic006G175700 Sobic006G175700 Sobic001G332966--Sobic006G175700 Sobic009G136500 Sobic009G136500 Sobic001G332966--Sobic009G136500 Sobic008G030700 Sobic008G030700 Sobic001G332966--Sobic008G030700
Octagon: transcription factors


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