Gene annotation
Transcriptome id Sobic.004G290900.1
Synonym ATPS3, PS3, Sb04g032580
Functional annotation transporter, major facilitator family, putative, expressed
UniProt A0A194YS94
Pfam PF07690
Panther DB PTHR11662 PTHR11662:SF302
NCBI CDD KOG2533; Permease of the major facilitator superfamily
KEGG Orthology K13783; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G47420 : phosphate starvation-induced gene 3
RAP-DB (Rice) LOC_Os04g46880.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G517400 expressed protein -
2 Sobic.007G060900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed -
3 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.006G160500 aspartyl protease family protein, putative, expressed -
5 Sobic.002G213800 auxin-repressed protein, putative, expressed -
6 Sobic.003G085400 BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
7 Sobic.006G279800 expressed protein -
8 Sobic.010G161600 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
10 Sobic.009G064766 - -
11 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
12 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
13 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
14 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
15 Sobic.010G181150 - -
16 Sobic.008G032000 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
17 Sobic.003G262650 - -
18 Sobic.001G426400 expressed protein -
19 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
20 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic004G290900 Sobic004G290900 Sobic001G517400 Sobic001G517400 Sobic004G290900--Sobic001G517400 Sobic007G060900 Sobic007G060900 Sobic004G290900--Sobic007G060900 Sobic001G277000 Sobic001G277000 Sobic004G290900--Sobic001G277000 Sobic006G160500 Sobic006G160500 Sobic004G290900--Sobic006G160500 Sobic002G213800 Sobic002G213800 Sobic004G290900--Sobic002G213800 Sobic003G085400 Sobic003G085400 Sobic004G290900--Sobic003G085400 Sobic006G279800 Sobic006G279800 Sobic004G290900--Sobic006G279800 Sobic010G161600 Sobic010G161600 Sobic004G290900--Sobic010G161600 Sobic002G172600 Sobic002G172600 Sobic004G290900--Sobic002G172600 Sobic007G044500 Sobic007G044500 Sobic001G517400--Sobic007G044500 Sobic001G517400--Sobic003G085400 Sobic010G181150 Sobic010G181150 Sobic001G517400--Sobic010G181150 Sobic001G517400--Sobic004G290900 Sobic007G144400 Sobic007G144400 Sobic001G517400--Sobic007G144400 Sobic001G517400--Sobic001G277000 Sobic001G332966 Sobic001G332966 Sobic001G517400--Sobic001G332966 Sobic006G265400 Sobic006G265400 Sobic007G060900--Sobic006G265400 Sobic001G426400 Sobic001G426400 Sobic007G060900--Sobic001G426400 Sobic001G254400 Sobic001G254400 Sobic007G060900--Sobic001G254400 Sobic004G070200 Sobic004G070200 Sobic007G060900--Sobic004G070200 Sobic004G247800 Sobic004G247800 Sobic007G060900--Sobic004G247800 Sobic009G197000 Sobic009G197000 Sobic007G060900--Sobic009G197000 Sobic007G060900--Sobic002G172600 Sobic007G182600 Sobic007G182600 Sobic007G060900--Sobic007G182600 Sobic010G270900 Sobic010G270900 Sobic007G060900--Sobic010G270900 Sobic008G124100 Sobic008G124100 Sobic001G277000--Sobic008G124100 Sobic007G189800 Sobic007G189800 Sobic001G277000--Sobic007G189800 Sobic009G064766 Sobic009G064766 Sobic001G277000--Sobic009G064766 Sobic004G345900 Sobic004G345900 Sobic001G277000--Sobic004G345900 Sobic009G078500 Sobic009G078500 Sobic001G277000--Sobic009G078500 Sobic001G277000--Sobic002G213800 Sobic004G199600 Sobic004G199600 Sobic001G277000--Sobic004G199600 Sobic005G085200 Sobic005G085200 Sobic001G277000--Sobic005G085200 Sobic010G146200 Sobic010G146200 Sobic001G277000--Sobic010G146200 Sobic006G160500--Sobic001G277000 Sobic006G160500--Sobic007G189800 Sobic006G160500--Sobic009G064766 Sobic006G160500--Sobic008G124100 Sobic003G400266 Sobic003G400266 Sobic006G160500--Sobic003G400266 Sobic006G160500--Sobic010G146200 Sobic005G003200 Sobic005G003200 Sobic006G160500--Sobic005G003200 Sobic004G099100 Sobic004G099100 Sobic006G160500--Sobic004G099100 Sobic003G176100 Sobic003G176100 Sobic006G160500--Sobic003G176100 Sobic002G213800--Sobic004G345900 Sobic002G213800--Sobic001G277000 Sobic002G331000 Sobic002G331000 Sobic002G213800--Sobic002G331000 Sobic002G213800--Sobic007G189800 Sobic010G270300 Sobic010G270300 Sobic002G213800--Sobic010G270300 Sobic002G213800--Sobic008G124100 Sobic010G057400 Sobic010G057400 Sobic002G213800--Sobic010G057400 Sobic002G213800--Sobic003G400266 Sobic002G213800--Sobic005G085200 Sobic005G141000 Sobic005G141000 Sobic003G085400--Sobic005G141000 Sobic008G130700 Sobic008G130700 Sobic003G085400--Sobic008G130700 Sobic003G095000 Sobic003G095000 Sobic003G085400--Sobic003G095000 Sobic003G085400--Sobic001G517400 Sobic006G060700 Sobic006G060700 Sobic003G085400--Sobic006G060700 Sobic007G090415 Sobic007G090415 Sobic003G085400--Sobic007G090415 Sobic002G190100 Sobic002G190100 Sobic003G085400--Sobic002G190100 Sobic003G236300 Sobic003G236300 Sobic003G085400--Sobic003G236300 Sobic006G263800 Sobic006G263800 Sobic003G085400--Sobic006G263800 Sobic006G279800--Sobic005G085200 Sobic001G191200 Sobic001G191200 Sobic006G279800--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic006G279800--Sobic003G406700 Sobic001G423100 Sobic001G423100 Sobic006G279800--Sobic001G423100 Sobic006G279800--Sobic009G197000 Sobic005G085600 Sobic005G085600 Sobic006G279800--Sobic005G085600 Sobic010G057300 Sobic010G057300 Sobic006G279800--Sobic010G057300 Sobic001G225500 Sobic001G225500 Sobic006G279800--Sobic001G225500 Sobic001G377000 Sobic001G377000 Sobic006G279800--Sobic001G377000 Sobic009G033200 Sobic009G033200 Sobic010G161600--Sobic009G033200 Sobic004G249500 Sobic004G249500 Sobic010G161600--Sobic004G249500 Sobic009G138500 Sobic009G138500 Sobic010G161600--Sobic009G138500 Sobic009G197200 Sobic009G197200 Sobic010G161600--Sobic009G197200 Sobic010G161600--Sobic006G060700 Sobic008G000900 Sobic008G000900 Sobic010G161600--Sobic008G000900 Sobic005G218400 Sobic005G218400 Sobic010G161600--Sobic005G218400 Sobic010G161600--Sobic005G141000 Sobic004G246800 Sobic004G246800 Sobic010G161600--Sobic004G246800 Sobic002G172600--Sobic004G070200 Sobic002G172600--Sobic004G247800 Sobic010G143400 Sobic010G143400 Sobic002G172600--Sobic010G143400 Sobic006G271900 Sobic006G271900 Sobic002G172600--Sobic006G271900 Sobic001G437801 Sobic001G437801 Sobic002G172600--Sobic001G437801 Sobic004G216700 Sobic004G216700 Sobic002G172600--Sobic004G216700 Sobic007G131200 Sobic007G131200 Sobic002G172600--Sobic007G131200 Sobic002G172600--Sobic001G254400 Sobic001G040600 Sobic001G040600 Sobic002G172600--Sobic001G040600
Octagon: transcription factors


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