Gene annotation
Transcriptome id Sobic.001G534066.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBV2
Pfam PF03004
Panther DB PTHR33063 PTHR33063:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g16040.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G176550 - -
2 Sobic.003G217700 - -
3 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
4 Sobic.001G159400 protein kinase domain containing protein, expressed -
5 Sobic.002G073250 - -
6 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
7 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
8 Sobic.004G354200 expressed protein -
9 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
10 Sobic.003G434700 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed K03495: gidA, mnmG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme
11 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
12 Sobic.002G148750 - -
13 Sobic.001G318432 - -
14 Sobic.004G181700 calmodulin binding protein, putative, expressed -
15 Sobic.003G429650 - -
16 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
17 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
18 Sobic.002G127550 - -
19 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
20 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC


Gene co-expression network
sample Sobic001G534066 Sobic001G534066 Sobic010G176550 Sobic010G176550 Sobic001G534066--Sobic010G176550 Sobic003G217700 Sobic003G217700 Sobic001G534066--Sobic003G217700 Sobic003G138500 Sobic003G138500 Sobic001G534066--Sobic003G138500 Sobic001G159400 Sobic001G159400 Sobic001G534066--Sobic001G159400 Sobic002G073250 Sobic002G073250 Sobic001G534066--Sobic002G073250 Sobic001G191600 Sobic001G191600 Sobic001G534066--Sobic001G191600 Sobic001G102500 Sobic001G102500 Sobic001G534066--Sobic001G102500 Sobic004G354200 Sobic004G354200 Sobic001G534066--Sobic004G354200 Sobic007G023200 Sobic007G023200 Sobic001G534066--Sobic007G023200 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic004G034800 Sobic004G034800 Sobic010G176550--Sobic004G034800 Sobic001G261573 Sobic001G261573 Sobic010G176550--Sobic001G261573 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic001G035900 Sobic001G035900 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic003G217700--Sobic007G185700 Sobic003G217700--Sobic010G176550 Sobic003G217700--Sobic007G023200 Sobic001G530900 Sobic001G530900 Sobic003G217700--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic003G217700--Sobic005G084500 Sobic004G042200 Sobic004G042200 Sobic003G217700--Sobic004G042200 Sobic008G001900 Sobic008G001900 Sobic003G217700--Sobic008G001900 Sobic001G198100 Sobic001G198100 Sobic003G217700--Sobic001G198100 Sobic004G238200 Sobic004G238200 Sobic003G217700--Sobic004G238200 Sobic002G127550 Sobic002G127550 Sobic003G138500--Sobic002G127550 Sobic003G138500--Sobic001G159400 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic003G138500--Sobic010G176550 Sobic007G116200 Sobic007G116200 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic001G159400--Sobic003G381200 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100 Sobic010G153201 Sobic010G153201 Sobic002G073250--Sobic010G153201 Sobic002G006600 Sobic002G006600 Sobic002G073250--Sobic002G006600 Sobic007G226600 Sobic007G226600 Sobic002G073250--Sobic007G226600 Sobic003G017100 Sobic003G017100 Sobic002G073250--Sobic003G017100 Sobic002G073250--Sobic001G534066 Sobic005G110200 Sobic005G110200 Sobic002G073250--Sobic005G110200 Sobic002G097900 Sobic002G097900 Sobic002G073250--Sobic002G097900 Sobic002G073250--Sobic010G176550 Sobic006G182900 Sobic006G182900 Sobic002G073250--Sobic006G182900 Sobic006G086500 Sobic006G086500 Sobic001G191600--Sobic006G086500 Sobic003G029700 Sobic003G029700 Sobic001G191600--Sobic003G029700 Sobic006G142775 Sobic006G142775 Sobic001G191600--Sobic006G142775 Sobic004G205800 Sobic004G205800 Sobic001G191600--Sobic004G205800 Sobic001G318432 Sobic001G318432 Sobic001G191600--Sobic001G318432 Sobic001G365900 Sobic001G365900 Sobic001G191600--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic001G191600--Sobic002G294800 Sobic010G076300 Sobic010G076300 Sobic001G191600--Sobic010G076300 Sobic002G173000 Sobic002G173000 Sobic001G191600--Sobic002G173000 Sobic003G067100 Sobic003G067100 Sobic001G102500--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic001G102500--Sobic005G014700 Sobic010G255100 Sobic010G255100 Sobic001G102500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic001G102500--Sobic006G186600 Sobic003G170200 Sobic003G170200 Sobic001G102500--Sobic003G170200 Sobic002G168300 Sobic002G168300 Sobic001G102500--Sobic002G168300 Sobic003G434700 Sobic003G434700 Sobic001G102500--Sobic003G434700 Sobic006G210400 Sobic006G210400 Sobic001G102500--Sobic006G210400 Sobic004G238900 Sobic004G238900 Sobic001G102500--Sobic004G238900 Sobic004G354200--Sobic004G034800 Sobic008G011200 Sobic008G011200 Sobic004G354200--Sobic008G011200 Sobic004G354200--Sobic010G176550 Sobic004G354200--Sobic002G127550 Sobic006G030400 Sobic006G030400 Sobic004G354200--Sobic006G030400 Sobic001G433000 Sobic001G433000 Sobic004G354200--Sobic001G433000 Sobic004G120100 Sobic004G120100 Sobic004G354200--Sobic004G120100 Sobic004G354200--Sobic003G381200 Sobic004G354200--Sobic007G185700 Sobic007G023200--Sobic004G238200 Sobic007G023200--Sobic003G217700 Sobic004G163800 Sobic004G163800 Sobic007G023200--Sobic004G163800 Sobic007G023200--Sobic003G234900 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G023200--Sobic007G185700 Sobic008G062400 Sobic008G062400 Sobic007G023200--Sobic008G062400 Sobic007G023200--Sobic010G176550
Octagon: transcription factors


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