Gene annotation
Transcriptome id Sobic.001G535000.1
Synonym
Functional annotation -
UniProt C5X133
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G202900 expressed protein -
2 Sobic.006G053500 expressed protein K10990: RMI1, RecQ-mediated genome instability protein 1
3 Sobic.010G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
4 Sobic.005G008700 pentatricopeptide repeat domain containing protein, putative, expressed -
5 Sobic.005G082000 DEFL8 - Defensin and Defensin-like DEFL family -
6 Sobic.006G236100 - -
7 Sobic.003G399900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
8 Sobic.004G289700 C2 domain containing protein, putative, expressed -
9 Sobic.002G264100 transcription factor RF2a, putative, expressed -
10 Sobic.003G289000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@3-5 exonuclease domain-containing protein, putative, expressed -
11 Sobic.010G103000 expressed protein -
12 Sobic.003G063600 expressed protein -
13 Sobic.003G429101 - -
14 Sobic.009G150100 expressed protein -
15 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
16 Sobic.003G046900 expressed protein -
17 Sobic.003G422100 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
18 Sobic.010G091366 - -
19 Sobic.006G278950 - -
20 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G535000 Sobic001G535000 Sobic010G202900 Sobic010G202900 Sobic001G535000--Sobic010G202900 Sobic006G053500 Sobic006G053500 Sobic001G535000--Sobic006G053500 Sobic010G248100 Sobic010G248100 Sobic001G535000--Sobic010G248100 Sobic005G008700 Sobic005G008700 Sobic001G535000--Sobic005G008700 Sobic005G082000 Sobic005G082000 Sobic001G535000--Sobic005G082000 Sobic006G236100 Sobic006G236100 Sobic001G535000--Sobic006G236100 Sobic003G399900 Sobic003G399900 Sobic001G535000--Sobic003G399900 Sobic004G289700 Sobic004G289700 Sobic001G535000--Sobic004G289700 Sobic002G264100 Sobic002G264100 Sobic001G535000--Sobic002G264100 Sobic010G202900--Sobic006G053500 Sobic010G202900--Sobic003G399900 Sobic004G338400 Sobic004G338400 Sobic010G202900--Sobic004G338400 Sobic010G103000 Sobic010G103000 Sobic010G202900--Sobic010G103000 Sobic010G091366 Sobic010G091366 Sobic010G202900--Sobic010G091366 Sobic003G429101 Sobic003G429101 Sobic010G202900--Sobic003G429101 Sobic010G202900--Sobic006G236100 Sobic007G075200 Sobic007G075200 Sobic010G202900--Sobic007G075200 Sobic003G422100 Sobic003G422100 Sobic010G202900--Sobic003G422100 Sobic003G034250 Sobic003G034250 Sobic006G053500--Sobic003G034250 Sobic008G154000 Sobic008G154000 Sobic006G053500--Sobic008G154000 Sobic003G091100 Sobic003G091100 Sobic006G053500--Sobic003G091100 Sobic010G229200 Sobic010G229200 Sobic006G053500--Sobic010G229200 Sobic001G218701 Sobic001G218701 Sobic006G053500--Sobic001G218701 Sobic007G024900 Sobic007G024900 Sobic006G053500--Sobic007G024900 Sobic007G100275 Sobic007G100275 Sobic006G053500--Sobic007G100275 Sobic003G058400 Sobic003G058400 Sobic006G053500--Sobic003G058400 SobicK042700 SobicK042700 Sobic006G053500--SobicK042700 Sobic002G368000 Sobic002G368000 Sobic010G248100--Sobic002G368000 Sobic004G041000 Sobic004G041000 Sobic010G248100--Sobic004G041000 Sobic003G049000 Sobic003G049000 Sobic010G248100--Sobic003G049000 Sobic003G303000 Sobic003G303000 Sobic010G248100--Sobic003G303000 Sobic010G248100--Sobic005G008700 Sobic010G058400 Sobic010G058400 Sobic010G248100--Sobic010G058400 Sobic004G196900 Sobic004G196900 Sobic010G248100--Sobic004G196900 Sobic002G141050 Sobic002G141050 Sobic010G248100--Sobic002G141050 Sobic002G089300 Sobic002G089300 Sobic010G248100--Sobic002G089300 Sobic003G049100 Sobic003G049100 Sobic005G008700--Sobic003G049100 Sobic005G008700--Sobic006G053500 Sobic003G063600 Sobic003G063600 Sobic005G008700--Sobic003G063600 Sobic003G162200 Sobic003G162200 Sobic005G008700--Sobic003G162200 Sobic004G196000 Sobic004G196000 Sobic005G008700--Sobic004G196000 Sobic005G008700--Sobic004G289700 Sobic005G008700--Sobic001G218701 Sobic001G493300 Sobic001G493300 Sobic005G008700--Sobic001G493300 Sobic005G008700--Sobic005G082000 Sobic005G082000--Sobic004G289700 Sobic005G082000--Sobic003G063600 Sobic005G082000--Sobic003G058400 Sobic001G272300 Sobic001G272300 Sobic005G082000--Sobic001G272300 Sobic001G379800 Sobic001G379800 Sobic006G236100--Sobic001G379800 Sobic006G236100--Sobic004G196000 Sobic006G236100--Sobic001G493300 Sobic002G069601 Sobic002G069601 Sobic006G236100--Sobic002G069601 Sobic008G192200 Sobic008G192200 Sobic006G236100--Sobic008G192200 Sobic004G023733 Sobic004G023733 Sobic006G236100--Sobic004G023733 Sobic002G035766 Sobic002G035766 Sobic006G236100--Sobic002G035766 Sobic003G141550 Sobic003G141550 Sobic006G236100--Sobic003G141550 Sobic006G236100--Sobic003G058400 Sobic003G399900--Sobic006G053500 Sobic003G399900--Sobic010G202900 Sobic005G110550 Sobic005G110550 Sobic003G399900--Sobic005G110550 Sobic002G279200 Sobic002G279200 Sobic003G399900--Sobic002G279200 Sobic003G316400 Sobic003G316400 Sobic003G399900--Sobic003G316400 Sobic003G399900--Sobic004G338400 Sobic003G399900--Sobic005G008700 Sobic003G399900--Sobic010G091366 Sobic008G072050 Sobic008G072050 Sobic003G399900--Sobic008G072050 Sobic004G289700--Sobic003G058400 Sobic004G289700--Sobic007G100275 Sobic009G150100 Sobic009G150100 Sobic004G289700--Sobic009G150100 Sobic004G289700--Sobic003G091100 Sobic004G289700--SobicK042700 Sobic004G289700--Sobic001G272300 Sobic001G205600 Sobic001G205600 Sobic002G264100--Sobic001G205600 Sobic003G440100 Sobic003G440100 Sobic002G264100--Sobic003G440100 Sobic009G247601 Sobic009G247601 Sobic002G264100--Sobic009G247601 Sobic002G264100--Sobic010G091366 Sobic003G318350 Sobic003G318350 Sobic002G264100--Sobic003G318350 Sobic007G003300 Sobic007G003300 Sobic002G264100--Sobic007G003300 Sobic002G292400 Sobic002G292400 Sobic002G264100--Sobic002G292400 Sobic006G223700 Sobic006G223700 Sobic002G264100--Sobic006G223700 Sobic003G146450 Sobic003G146450 Sobic002G264100--Sobic003G146450
Octagon: transcription factors


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