Gene annotation
Transcriptome id Sobic.010G202900.4,Sobic.010G202900.1,Sobic.010G202900.3,Sobic.010G202900.2
Synonym Sb10g025060
Functional annotation expressed protein
UniProt A0A194YLI2 , A0A194YKE2
Pfam PF10294
Panther DB PTHR23108 PTHR23108:SF0
NCBI CDD KOG2793; Putative N2,N2-dimethylguanosine tRNA methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79915 : Putative methyltransferase family protein
RAP-DB (Rice) LOC_Os06g43250.1 : expressed protein
MaizeGDB (Corn) Zm00025a042081
Brachypodium KQK16747
Barley HORVU7Hr1G116270.2 , HORVU7Hr1G116270.3 , HORVU7Hr1G116270.4 , HORVU7Hr1G116270.5 , HORVU7Hr1G116270.11 , HORVU7Hr1G116270.12 , HORVU7Hr1G116270.14 , HORVU7Hr1G116270.16 , HORVU7Hr1G116270.24
Wheat TraesCS7B02G440300 , TraesCS7B02G440300 , TraesCS7A02G523700 , TraesCS7D02G512500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G053500 expressed protein K10990: RMI1, RecQ-mediated genome instability protein 1
2 Sobic.003G399900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
3 Sobic.004G338400 "TH1(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659894)@DUF640 domain containing protein, putative, expressed -
4 Sobic.010G103000 expressed protein -
5 Sobic.010G091366 - -
6 Sobic.003G429101 - -
7 Sobic.006G236100 - -
8 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
9 Sobic.003G422100 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
10 Sobic.003G046900 expressed protein -
11 Sobic.004G082200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
12 Sobic.003G034250 - -
13 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
14 Sobic.009G202101 - -
15 Sobic.003G242600 - -
16 Sobic.010G206100 expressed protein -
17 Sobic.005G024600 Rf1, mitochondrial precursor, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
18 Sobic.001G535000 - -
19 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
20 Sobic.009G214700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed -


Gene co-expression network
sample Sobic010G202900 Sobic010G202900 Sobic006G053500 Sobic006G053500 Sobic010G202900--Sobic006G053500 Sobic003G399900 Sobic003G399900 Sobic010G202900--Sobic003G399900 Sobic004G338400 Sobic004G338400 Sobic010G202900--Sobic004G338400 Sobic010G103000 Sobic010G103000 Sobic010G202900--Sobic010G103000 Sobic010G091366 Sobic010G091366 Sobic010G202900--Sobic010G091366 Sobic003G429101 Sobic003G429101 Sobic010G202900--Sobic003G429101 Sobic006G236100 Sobic006G236100 Sobic010G202900--Sobic006G236100 Sobic007G075200 Sobic007G075200 Sobic010G202900--Sobic007G075200 Sobic003G422100 Sobic003G422100 Sobic010G202900--Sobic003G422100 Sobic003G034250 Sobic003G034250 Sobic006G053500--Sobic003G034250 Sobic008G154000 Sobic008G154000 Sobic006G053500--Sobic008G154000 Sobic003G091100 Sobic003G091100 Sobic006G053500--Sobic003G091100 Sobic010G229200 Sobic010G229200 Sobic006G053500--Sobic010G229200 Sobic001G218701 Sobic001G218701 Sobic006G053500--Sobic001G218701 Sobic007G024900 Sobic007G024900 Sobic006G053500--Sobic007G024900 Sobic007G100275 Sobic007G100275 Sobic006G053500--Sobic007G100275 Sobic003G058400 Sobic003G058400 Sobic006G053500--Sobic003G058400 SobicK042700 SobicK042700 Sobic006G053500--SobicK042700 Sobic003G399900--Sobic006G053500 Sobic003G399900--Sobic010G202900 Sobic005G110550 Sobic005G110550 Sobic003G399900--Sobic005G110550 Sobic002G279200 Sobic002G279200 Sobic003G399900--Sobic002G279200 Sobic003G316400 Sobic003G316400 Sobic003G399900--Sobic003G316400 Sobic003G399900--Sobic004G338400 Sobic005G008700 Sobic005G008700 Sobic003G399900--Sobic005G008700 Sobic003G399900--Sobic010G091366 Sobic008G072050 Sobic008G072050 Sobic003G399900--Sobic008G072050 Sobic004G338400--Sobic010G091366 Sobic005G156800 Sobic005G156800 Sobic004G338400--Sobic005G156800 Sobic004G082200 Sobic004G082200 Sobic004G338400--Sobic004G082200 Sobic002G380750 Sobic002G380750 Sobic004G338400--Sobic002G380750 Sobic004G338400--Sobic006G053500 Sobic005G181700 Sobic005G181700 Sobic004G338400--Sobic005G181700 Sobic001G307450 Sobic001G307450 Sobic004G338400--Sobic001G307450 Sobic007G141001 Sobic007G141001 Sobic004G338400--Sobic007G141001 Sobic004G338400--Sobic003G034250 Sobic010G103000--Sobic007G075200 Sobic006G261000 Sobic006G261000 Sobic010G103000--Sobic006G261000 Sobic002G213050 Sobic002G213050 Sobic010G103000--Sobic002G213050 Sobic001G528000 Sobic001G528000 Sobic010G103000--Sobic001G528000 Sobic004G078400 Sobic004G078400 Sobic010G103000--Sobic004G078400 Sobic003G049100 Sobic003G049100 Sobic010G103000--Sobic003G049100 Sobic003G188900 Sobic003G188900 Sobic010G103000--Sobic003G188900 Sobic010G103000--Sobic006G053500 Sobic005G199500 Sobic005G199500 Sobic010G103000--Sobic005G199500 Sobic010G091366--Sobic005G181700 Sobic002G069601 Sobic002G069601 Sobic010G091366--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic010G091366--Sobic003G318400 Sobic007G059800 Sobic007G059800 Sobic010G091366--Sobic007G059800 Sobic010G091366--Sobic003G034250 Sobic010G091366--Sobic006G053500 Sobic010G091366--Sobic004G082200 Sobic009G150100 Sobic009G150100 Sobic010G091366--Sobic009G150100 Sobic004G201200 Sobic004G201200 Sobic010G091366--Sobic004G201200 Sobic003G046900 Sobic003G046900 Sobic003G429101--Sobic003G046900 Sobic010G212900 Sobic010G212900 Sobic003G429101--Sobic010G212900 Sobic001G220066 Sobic001G220066 Sobic003G429101--Sobic001G220066 Sobic002G348200 Sobic002G348200 Sobic003G429101--Sobic002G348200 Sobic002G157350 Sobic002G157350 Sobic003G429101--Sobic002G157350 Sobic004G196000 Sobic004G196000 Sobic003G429101--Sobic004G196000 Sobic009G214700 Sobic009G214700 Sobic003G429101--Sobic009G214700 Sobic006G149650 Sobic006G149650 Sobic003G429101--Sobic006G149650 Sobic008G192200 Sobic008G192200 Sobic003G429101--Sobic008G192200 Sobic001G379800 Sobic001G379800 Sobic006G236100--Sobic001G379800 Sobic006G236100--Sobic004G196000 Sobic001G493300 Sobic001G493300 Sobic006G236100--Sobic001G493300 Sobic006G236100--Sobic002G069601 Sobic006G236100--Sobic008G192200 Sobic004G023733 Sobic004G023733 Sobic006G236100--Sobic004G023733 Sobic002G035766 Sobic002G035766 Sobic006G236100--Sobic002G035766 Sobic003G141550 Sobic003G141550 Sobic006G236100--Sobic003G141550 Sobic006G236100--Sobic003G058400 Sobic007G075200--Sobic006G261000 Sobic007G075200--Sobic009G214700 Sobic007G075200--Sobic008G192200 Sobic007G075200--Sobic003G091100 Sobic007G075200--SobicK042700 Sobic001G272300 Sobic001G272300 Sobic007G075200--Sobic001G272300 Sobic003G143401 Sobic003G143401 Sobic003G422100--Sobic003G143401 Sobic003G422100--Sobic003G046900 Sobic003G242600 Sobic003G242600 Sobic003G422100--Sobic003G242600 Sobic003G422100--Sobic009G214700 Sobic003G422100--Sobic010G212900 Sobic003G422100--Sobic003G429101 Sobic003G422100--Sobic004G196000 Sobic002G081000 Sobic002G081000 Sobic003G422100--Sobic002G081000 Sobic003G422100--Sobic008G192200
Octagon: transcription factors


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