Gene annotation
Transcriptome id Sobic.002G060200.1
Synonym
Functional annotation OsFBX238 - F-box domain containing protein, expressed
UniProt A0A1B6Q9H5
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22430 : F-box family protein
RAP-DB (Rice) LOC_Os07g35060.1 : OsFBX238 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045228 , Zm00025a045220 , Zm00025a045219 , Zm00025a045232
Brachypodium -
Barley HORVU5Hr1G019140.1 , HORVU5Hr1G019140.4 , HORVU5Hr1G019140.5 , HORVU5Hr1G019140.2 , HORVU5Hr1G019140.3
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
2 Sobic.010G027100 expressed protein -
3 Sobic.009G002100 expressed protein -
4 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
5 Sobic.004G080800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
6 Sobic.010G198400 expressed protein -
7 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
8 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
9 Sobic.003G211800 expressed protein -
10 Sobic.002G189500 expressed protein -
11 Sobic.009G206100 expressed protein -
12 Sobic.009G048700 expressed protein -
13 Sobic.010G061600 - -
14 Sobic.002G060000 OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.004G228300 C2 domain containing protein, putative, expressed -
16 Sobic.001G240600 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
17 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
18 Sobic.007G128000 cytochrome P450, putative, expressed -
19 Sobic.004G190400 expressed protein -
20 Sobic.003G234701 - -


Gene co-expression network
sample Sobic002G060200 Sobic002G060200 Sobic002G243400 Sobic002G243400 Sobic002G060200--Sobic002G243400 Sobic010G027100 Sobic010G027100 Sobic002G060200--Sobic010G027100 Sobic009G002100 Sobic009G002100 Sobic002G060200--Sobic009G002100 Sobic001G417700 Sobic001G417700 Sobic002G060200--Sobic001G417700 Sobic004G080800 Sobic004G080800 Sobic002G060200--Sobic004G080800 Sobic010G198400 Sobic010G198400 Sobic002G060200--Sobic010G198400 Sobic002G418300 Sobic002G418300 Sobic002G060200--Sobic002G418300 Sobic009G145000 Sobic009G145000 Sobic002G060200--Sobic009G145000 Sobic003G211800 Sobic003G211800 Sobic002G060200--Sobic003G211800 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic009G048700 Sobic009G048700 Sobic002G243400--Sobic009G048700 Sobic002G189500 Sobic002G189500 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic009G008000 Sobic009G008000 Sobic002G243400--Sobic009G008000 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic004G190400 Sobic004G190400 Sobic002G243400--Sobic004G190400 Sobic010G027100--Sobic002G243400 Sobic010G027100--Sobic009G145000 Sobic010G027100--Sobic001G417700 Sobic010G058300 Sobic010G058300 Sobic010G027100--Sobic010G058300 Sobic010G027100--Sobic002G418300 Sobic010G027100--Sobic009G002100 Sobic009G229400 Sobic009G229400 Sobic010G027100--Sobic009G229400 Sobic010G027100--Sobic009G048700 Sobic005G174750 Sobic005G174750 Sobic010G027100--Sobic005G174750 Sobic009G002100--Sobic009G145000 Sobic009G002100--Sobic002G243400 Sobic009G002100--Sobic001G417700 Sobic009G002100--Sobic002G418300 Sobic001G240600 Sobic001G240600 Sobic009G002100--Sobic001G240600 Sobic008G155700 Sobic008G155700 Sobic009G002100--Sobic008G155700 Sobic009G002100--Sobic002G189500 Sobic009G002100--Sobic004G080800 Sobic001G220500 Sobic001G220500 Sobic009G002100--Sobic001G220500 Sobic007G128000 Sobic007G128000 Sobic001G417700--Sobic007G128000 Sobic001G417700--Sobic002G418300 Sobic007G094700 Sobic007G094700 Sobic001G417700--Sobic007G094700 Sobic001G417700--Sobic009G145000 Sobic002G101600 Sobic002G101600 Sobic001G417700--Sobic002G101600 Sobic006G266400 Sobic006G266400 Sobic001G417700--Sobic006G266400 Sobic001G136000 Sobic001G136000 Sobic001G417700--Sobic001G136000 Sobic001G417700--Sobic002G189500 Sobic001G417700--Sobic001G240600 Sobic010G140100 Sobic010G140100 Sobic004G080800--Sobic010G140100 Sobic010G271600 Sobic010G271600 Sobic004G080800--Sobic010G271600 Sobic009G098400 Sobic009G098400 Sobic004G080800--Sobic009G098400 Sobic006G173400 Sobic006G173400 Sobic004G080800--Sobic006G173400 Sobic004G187400 Sobic004G187400 Sobic004G080800--Sobic004G187400 Sobic010G190500 Sobic010G190500 Sobic004G080800--Sobic010G190500 Sobic010G257800 Sobic010G257800 Sobic004G080800--Sobic010G257800 Sobic002G061300 Sobic002G061300 Sobic004G080800--Sobic002G061300 Sobic005G214700 Sobic005G214700 Sobic004G080800--Sobic005G214700 Sobic002G424200 Sobic002G424200 Sobic010G198400--Sobic002G424200 Sobic010G038000 Sobic010G038000 Sobic010G198400--Sobic010G038000 Sobic006G254400 Sobic006G254400 Sobic010G198400--Sobic006G254400 Sobic009G006700 Sobic009G006700 Sobic010G198400--Sobic009G006700 Sobic010G198400--Sobic009G048700 Sobic004G020200 Sobic004G020200 Sobic010G198400--Sobic004G020200 Sobic010G198400--Sobic002G243400 Sobic006G199500 Sobic006G199500 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000 Sobic002G418300--Sobic001G417700 Sobic002G418300--Sobic007G094700 Sobic003G133600 Sobic003G133600 Sobic002G418300--Sobic003G133600 Sobic004G203150 Sobic004G203150 Sobic002G418300--Sobic004G203150 Sobic001G029300 Sobic001G029300 Sobic002G418300--Sobic001G029300 Sobic002G418300--Sobic002G101600 Sobic004G328200 Sobic004G328200 Sobic002G418300--Sobic004G328200 Sobic002G418300--Sobic002G189500 Sobic002G418300--Sobic008G155700 Sobic009G145000--Sobic002G189500 Sobic009G145000--Sobic001G417700 Sobic009G145000--Sobic004G328200 Sobic009G145000--Sobic001G029300 Sobic009G145000--Sobic006G266400 Sobic009G145000--Sobic004G190400 Sobic009G145000--Sobic009G008000 Sobic009G145000--Sobic004G203150 Sobic009G145000--Sobic007G094700 Sobic003G211800--Sobic002G418300 Sobic003G211800--Sobic001G417700 Sobic003G211800--Sobic009G048700 Sobic003G211800--Sobic009G145000 Sobic003G211800--Sobic009G008000 Sobic003G211800--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic003G211800--Sobic008G056600 Sobic003G211800--Sobic001G136000 Sobic002G099700 Sobic002G099700 Sobic003G211800--Sobic002G099700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.