Gene annotation
Transcriptome id Sobic.002G105600.1,Sobic.002G105600.2
Synonym HPD, Sb02g008990, PDS1
Functional annotation glyoxalase family protein, putative, expressed
UniProt A0A1B6QAF0 , A0A1W0W3D1
Pfam -
Panther DB PTHR11959 PTHR11959:SF7
NCBI CDD KOG0638; 4-hydroxyphenylpyruvate dioxygenase
KEGG Orthology K00457; HPD, 4-hydroxyphenylpyruvate dioxygenase
Gene Ontology GO:0016701; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen GO:0009072aromatic amino acid family metabolic process GO:00038684-hydroxyphenylpyruvate dioxygenase activity


Orthologs (automatic annotation)
TAIR AT1G06570 : phytoene desaturation 1
RAP-DB (Rice) LOC_Os02g07160.1 : glyoxalase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045590
Brachypodium -
Barley -
Wheat TraesCS1B02G035800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G191450 - -
2 Sobic.001G064400 expressed protein -
3 Sobic.004G221800 DUF584 domain containing protein, putative, expressed -
4 Sobic.009G043800 SbDFR4 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
5 Sobic.003G229900 - -
6 Sobic.003G073200 expressed protein -
7 Sobic.002G114200 GAGA-binding protein, putative, expressed -
8 Sobic.007G007100 expressed protein -
9 Sobic.006G049633 - -
10 Sobic.001G446500 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.006G037500 triacylglycerol lipase 1 precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
12 Sobic.008G061900 - -
13 Sobic.002G266700 - -
14 Sobic.005G183700 transferase family protein, putative, expressed -
15 Sobic.009G019400 - -
16 Sobic.001G242400 - -
17 Sobic.001G273950 - -
18 Sobic.001G432750 - -
19 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
20 Sobic.002G347850 - -


Gene co-expression network
sample Sobic002G105600 Sobic002G105600 Sobic002G191450 Sobic002G191450 Sobic002G105600--Sobic002G191450 Sobic001G064400 Sobic001G064400 Sobic002G105600--Sobic001G064400 Sobic004G221800 Sobic004G221800 Sobic002G105600--Sobic004G221800 Sobic009G043800 Sobic009G043800 Sobic002G105600--Sobic009G043800 Sobic003G229900 Sobic003G229900 Sobic002G105600--Sobic003G229900 Sobic003G073200 Sobic003G073200 Sobic002G105600--Sobic003G073200 Sobic002G114200 Sobic002G114200 Sobic002G105600--Sobic002G114200 Sobic007G007100 Sobic007G007100 Sobic002G105600--Sobic007G007100 Sobic006G049633 Sobic006G049633 Sobic002G105600--Sobic006G049633 Sobic002G191450--Sobic001G064400 Sobic002G191450--Sobic009G043800 Sobic002G191450--Sobic002G114200 Sobic006G037500 Sobic006G037500 Sobic002G191450--Sobic006G037500 Sobic002G191450--Sobic004G221800 Sobic009G019400 Sobic009G019400 Sobic002G191450--Sobic009G019400 Sobic002G191450--Sobic003G229900 Sobic002G191450--Sobic007G007100 Sobic002G191450--Sobic006G049633 Sobic001G064400--Sobic002G191450 Sobic001G064400--Sobic009G043800 Sobic001G064400--Sobic002G114200 Sobic001G064400--Sobic006G037500 Sobic001G064400--Sobic004G221800 Sobic001G064400--Sobic009G019400 Sobic001G064400--Sobic003G229900 Sobic001G064400--Sobic007G007100 Sobic001G064400--Sobic006G049633 Sobic004G221800--Sobic009G043800 Sobic004G221800--Sobic001G064400 Sobic004G221800--Sobic002G191450 Sobic004G221800--Sobic003G229900 Sobic004G221800--Sobic002G114200 Sobic004G221800--Sobic007G007100 Sobic004G221800--Sobic006G049633 Sobic004G221800--Sobic006G037500 Sobic004G221800--Sobic009G019400 Sobic009G043800--Sobic001G064400 Sobic009G043800--Sobic002G191450 Sobic009G043800--Sobic006G037500 Sobic009G043800--Sobic004G221800 Sobic009G043800--Sobic002G114200 Sobic009G043800--Sobic009G019400 Sobic009G043800--Sobic003G229900 Sobic009G043800--Sobic007G007100 Sobic009G043800--Sobic006G049633 Sobic003G229900--Sobic006G049633 Sobic002G055000 Sobic002G055000 Sobic003G229900--Sobic002G055000 Sobic010G011500 Sobic010G011500 Sobic003G229900--Sobic010G011500 Sobic001G480900 Sobic001G480900 Sobic003G229900--Sobic001G480900 Sobic002G266700 Sobic002G266700 Sobic003G229900--Sobic002G266700 Sobic004G296750 Sobic004G296750 Sobic003G229900--Sobic004G296750 Sobic008G061900 Sobic008G061900 Sobic003G229900--Sobic008G061900 Sobic003G229900--Sobic007G007100 Sobic003G229900--Sobic009G019400 Sobic003G073200--Sobic002G105600 Sobic006G024000 Sobic006G024000 Sobic003G073200--Sobic006G024000 Sobic009G043900 Sobic009G043900 Sobic003G073200--Sobic009G043900 Sobic006G241000 Sobic006G241000 Sobic003G073200--Sobic006G241000 Sobic006G253600 Sobic006G253600 Sobic003G073200--Sobic006G253600 Sobic008G102466 Sobic008G102466 Sobic003G073200--Sobic008G102466 Sobic001G446500 Sobic001G446500 Sobic003G073200--Sobic001G446500 Sobic003G019500 Sobic003G019500 Sobic003G073200--Sobic003G019500 Sobic003G073200--Sobic006G037500 Sobic002G114200--Sobic009G019400 Sobic002G114200--Sobic002G191450 Sobic002G114200--Sobic001G064400 Sobic010G143666 Sobic010G143666 Sobic002G114200--Sobic010G143666 Sobic002G114200--Sobic003G229900 Sobic002G114200--Sobic006G049633 Sobic002G202050 Sobic002G202050 Sobic002G114200--Sobic002G202050 Sobic007G007100--Sobic006G049633 Sobic007G007100--Sobic003G229900 Sobic007G007100--Sobic002G266700 Sobic007G007100--Sobic002G055000 Sobic007G007100--Sobic004G296750 Sobic007G007100--Sobic008G061900 Sobic007G007100--Sobic001G480900 Sobic007G007100--Sobic010G011500 Sobic001G297900 Sobic001G297900 Sobic007G007100--Sobic001G297900 Sobic006G049633--Sobic003G229900 Sobic006G049633--Sobic002G055000 Sobic006G049633--Sobic004G296750 Sobic006G049633--Sobic001G480900 Sobic006G049633--Sobic002G266700 Sobic006G049633--Sobic010G011500 Sobic006G049633--Sobic008G061900 Sobic003G281000 Sobic003G281000 Sobic006G049633--Sobic003G281000 Sobic006G049633--Sobic007G007100
Octagon: transcription factors


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