Gene annotation
Transcriptome id Sobic.003G073200.1
Synonym
Functional annotation expressed protein
UniProt A0A1W0VW44
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g05210.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G105600 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase
2 Sobic.006G024000 Fusarium graminearum mycotoxi deoxynivaleno (DON) detoxification gene. Conferred resistance to DON(PubMedID : 23550529)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucosyltransferase("PubMedID : 26759170,PubMedID : 24597475")@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
3 Sobic.009G043900 O-methyltransferase, putative, expressed -
4 Sobic.006G241000 homeobox domain containing protein, expressed -
5 Sobic.006G253600 - -
6 Sobic.008G102466 - -
7 Sobic.001G446500 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.003G019500 - -
9 Sobic.006G037500 triacylglycerol lipase 1 precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
10 Sobic.005G228250 - -
11 Sobic.002G191450 - -
12 Sobic.010G246300 Zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G064400 expressed protein -
14 Sobic.002G114200 GAGA-binding protein, putative, expressed -
15 Sobic.009G043800 SbDFR4 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
16 Sobic.002G266700 - -
17 Sobic.003G260050 - -
18 Sobic.009G193600 Eukaryotic aspartyl protease domain containing protein, expressed -
19 Sobic.004G071850 - -
20 Sobic.009G019400 - -


Gene co-expression network
sample Sobic003G073200 Sobic003G073200 Sobic002G105600 Sobic002G105600 Sobic003G073200--Sobic002G105600 Sobic006G024000 Sobic006G024000 Sobic003G073200--Sobic006G024000 Sobic009G043900 Sobic009G043900 Sobic003G073200--Sobic009G043900 Sobic006G241000 Sobic006G241000 Sobic003G073200--Sobic006G241000 Sobic006G253600 Sobic006G253600 Sobic003G073200--Sobic006G253600 Sobic008G102466 Sobic008G102466 Sobic003G073200--Sobic008G102466 Sobic001G446500 Sobic001G446500 Sobic003G073200--Sobic001G446500 Sobic003G019500 Sobic003G019500 Sobic003G073200--Sobic003G019500 Sobic006G037500 Sobic006G037500 Sobic003G073200--Sobic006G037500 Sobic002G191450 Sobic002G191450 Sobic002G105600--Sobic002G191450 Sobic001G064400 Sobic001G064400 Sobic002G105600--Sobic001G064400 Sobic004G221800 Sobic004G221800 Sobic002G105600--Sobic004G221800 Sobic009G043800 Sobic009G043800 Sobic002G105600--Sobic009G043800 Sobic003G229900 Sobic003G229900 Sobic002G105600--Sobic003G229900 Sobic002G105600--Sobic003G073200 Sobic002G114200 Sobic002G114200 Sobic002G105600--Sobic002G114200 Sobic007G007100 Sobic007G007100 Sobic002G105600--Sobic007G007100 Sobic006G049633 Sobic006G049633 Sobic002G105600--Sobic006G049633 Sobic009G198200 Sobic009G198200 Sobic006G024000--Sobic009G198200 Sobic002G018500 Sobic002G018500 Sobic006G024000--Sobic002G018500 Sobic007G135201 Sobic007G135201 Sobic006G024000--Sobic007G135201 Sobic003G426100 Sobic003G426100 Sobic006G024000--Sobic003G426100 Sobic007G067350 Sobic007G067350 Sobic006G024000--Sobic007G067350 Sobic007G066932 Sobic007G066932 Sobic006G024000--Sobic007G066932 Sobic007G067600 Sobic007G067600 Sobic006G024000--Sobic007G067600 Sobic010G035700 Sobic010G035700 Sobic006G024000--Sobic010G035700 Sobic010G102300 Sobic010G102300 Sobic006G024000--Sobic010G102300 Sobic009G043900--Sobic003G019500 Sobic003G260050 Sobic003G260050 Sobic009G043900--Sobic003G260050 Sobic003G111700 Sobic003G111700 Sobic009G043900--Sobic003G111700 Sobic010G194801 Sobic010G194801 Sobic009G043900--Sobic010G194801 Sobic004G071850 Sobic004G071850 Sobic009G043900--Sobic004G071850 Sobic002G015950 Sobic002G015950 Sobic009G043900--Sobic002G015950 Sobic008G088812 Sobic008G088812 Sobic009G043900--Sobic008G088812 Sobic002G202050 Sobic002G202050 Sobic009G043900--Sobic002G202050 Sobic006G241000--Sobic009G043900 Sobic006G241000--Sobic002G015950 Sobic006G241000--Sobic003G260050 Sobic009G193600 Sobic009G193600 Sobic006G241000--Sobic009G193600 Sobic006G241000--Sobic003G019500 Sobic006G241000--Sobic004G071850 Sobic006G241000--Sobic003G111700 Sobic006G241000--Sobic008G088812 Sobic006G241000--Sobic006G037500 Sobic001G208800 Sobic001G208800 Sobic006G253600--Sobic001G208800 Sobic003G240300 Sobic003G240300 Sobic006G253600--Sobic003G240300 Sobic006G253600--Sobic003G073200 Sobic004G135700 Sobic004G135700 Sobic006G253600--Sobic004G135700 Sobic001G343601 Sobic001G343601 Sobic006G253600--Sobic001G343601 Sobic002G182500 Sobic002G182500 Sobic006G253600--Sobic002G182500 Sobic009G009400 Sobic009G009400 Sobic006G253600--Sobic009G009400 Sobic006G253600--Sobic006G024000 Sobic002G182400 Sobic002G182400 Sobic006G253600--Sobic002G182400 Sobic008G102466--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic008G102466--Sobic006G247200 Sobic002G382200 Sobic002G382200 Sobic008G102466--Sobic002G382200 Sobic002G344800 Sobic002G344800 Sobic008G102466--Sobic002G344800 Sobic010G143666 Sobic010G143666 Sobic008G102466--Sobic010G143666 Sobic002G014100 Sobic002G014100 Sobic008G102466--Sobic002G014100 Sobic005G186200 Sobic005G186200 Sobic001G446500--Sobic005G186200 Sobic001G442600 Sobic001G442600 Sobic001G446500--Sobic001G442600 Sobic001G446500--Sobic002G105600 Sobic010G083300 Sobic010G083300 Sobic001G446500--Sobic010G083300 Sobic003G324200 Sobic003G324200 Sobic001G446500--Sobic003G324200 Sobic010G275150 Sobic010G275150 Sobic001G446500--Sobic010G275150 Sobic002G266400 Sobic002G266400 Sobic001G446500--Sobic002G266400 Sobic005G183700 Sobic005G183700 Sobic001G446500--Sobic005G183700 Sobic001G309666 Sobic001G309666 Sobic001G446500--Sobic001G309666 Sobic003G019500--Sobic010G194801 Sobic003G019500--Sobic003G111700 Sobic005G156201 Sobic005G156201 Sobic003G019500--Sobic005G156201 Sobic003G019500--Sobic008G088812 Sobic003G019500--Sobic003G260050 Sobic003G019500--Sobic009G043900 Sobic003G019500--Sobic002G202050 Sobic006G037500--Sobic009G043800 Sobic006G037500--Sobic002G191450 Sobic006G037500--Sobic001G064400 Sobic006G037500--Sobic002G114200 Sobic006G037500--Sobic004G071850 Sobic006G037500--Sobic009G193600 Sobic009G019400 Sobic009G019400 Sobic006G037500--Sobic009G019400 Sobic006G037500--Sobic004G221800 Sobic006G037500--Sobic003G260050
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.